RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 PDE4BQ07343 736 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 CERS3Q8IU89 383 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 A0A087X0B3 334 aa6.84□□□□□ -1.32
CD47-201ENST00000355354 TMEM232C9JQI7 657 aa6.84□□□□□ -1.32
CD47-201ENST00000355354 FZD9O00144 591 aa6.84□□□□□ -1.32
CD47-201ENST00000355354 NFIXQ14938 502 aa6.84□□□□□ -1.32
CD47-201ENST00000355354 NUMA1Q14980 2115 aa6.84□□□□□ -1.32
CD47-201ENST00000355354 TXNRD3Q86VQ6 643 aa6.84□□□□□ -1.32
CD47-201ENST00000355354 MTRQ99707 1265 aa6.84□□□□□ -1.32
CD47-201ENST00000355354 TSPYL4Q9UJ04 414 aa6.84□□□□□ -1.32
CD47-201ENST00000355354 GIGYF1O75420 1035 aaPredicted RBP6.83□□□□□ -1.32
CD47-201ENST00000355354 UBN2Q6ZU65 1347 aa6.83□□□□□ -1.32
CD47-201ENST00000355354 SGSM2O43147 1006 aa6.83□□□□□ -1.32
CD47-201ENST00000355354 KLRG1Q96E93 195 aa6.83□□□□□ -1.32
CD47-201ENST00000355354 KANSL2Q9H9L4 492 aa6.83□□□□□ -1.32
CD47-201ENST00000355354 CASP7P55210 303 aa6.83□□□□□ -1.32
CD47-201ENST00000355354 PTPN12Q05209 780 aaKnown RBP6.83□□□□□ -1.32
CD47-201ENST00000355354 UBAP2Q5T6F2 1119 aaKnown RBP6.83□□□□□ -1.32
CD47-201ENST00000355354 CEP135Q66GS9 1140 aa6.83□□□□□ -1.32
CD47-201ENST00000355354 RHPN1Q8TCX5 695 aa6.83□□□□□ -1.32
CD47-201ENST00000355354 DDRGK1Q96HY6 314 aa6.83□□□□□ -1.32
CD47-201ENST00000355354 DDX19BQ9UMR2 479 aa6.83□□□□□ -1.32
CD47-201ENST00000355354 CASP8AP2Q9UKL3 1982 aa6.83□□□□□ -1.32
CD47-201ENST00000355354 WDHD1O75717 1129 aaPredicted RBP6.83□□□□□ -1.32
CD47-201ENST00000355354 ARID1BQ8NFD5 2236 aaPredicted RBP6.82□□□□□ -1.32
CD47-201ENST00000355354 MMP10P09238 476 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 GJA10Q969M2 543 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 SRP68Q9UHB9 627 aaKnown RBP6.82□□□□□ -1.32
CD47-201ENST00000355354 COL2A1P02458 1487 aaPredicted RBP6.82□□□□□ -1.32
CD47-201ENST00000355354 DOCK1Q14185 1865 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 HOXA10P31260 410 aaPredicted RBP6.82□□□□□ -1.32
CD47-201ENST00000355354 APBA1Q02410 837 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 OSBP2Q969R2 916 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 GOLGA6L3A6NEY3 463 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 TRIM6-TRIM34B2RNG4 842 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 BIN1O00499 593 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 TOMM70O94826 608 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 SSH3Q8TE77 659 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 FAM84AQ96KN4 292 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 FAM217BQ9NTX9 383 aaPredicted RBP6.82□□□□□ -1.32
CD47-201ENST00000355354 CUL9Q8IWT3 2517 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 SRGNP10124 158 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 PLCB2Q00722 1185 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 SNW1Q13573 536 aaKnown RBP6.82□□□□□ -1.32
CD47-201ENST00000355354 TFCP2L1Q9NZI6 479 aa6.82□□□□□ -1.32
CD47-201ENST00000355354 CAPN2P17655 700 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 SCARA3Q6AZY7 606 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 COPS6Q7L5N1 327 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 RWDD1Q9H446 243 aaPredicted RBP6.81□□□□□ -1.32
CD47-201ENST00000355354 TRMT1Q9NXH9 659 aaKnown RBP6.81□□□□□ -1.32
CD47-201ENST00000355354 ZBTB1Q9Y2K1 713 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 UBE3BQ7Z3V4 1068 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 FAM89AQ96GI7 184 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 CLIC6Q96NY7 704 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 SPTAN1Q13813 2472 aaKnown RBP6.81□□□□□ -1.32
CD47-201ENST00000355354 SASH3O75995 380 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 KLHL40Q2TBA0 621 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 SNX21Q969T3 373 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 USP28Q96RU2 1077 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 ANTXR2P58335 489 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 TBC1D9BQ66K14 1250 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 MSL1Q68DK7 614 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 CLEC17AQ6ZS10 378 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 CLEC10AQ8IUN9 316 aa6.81□□□□□ -1.32
CD47-201ENST00000355354 GPR101Q96P66 508 aaPredicted RBP6.81□□□□□ -1.32
CD47-201ENST00000355354 PUS7LQ9H0K6 701 aaKnown RBP6.81□□□□□ -1.32
CD47-201ENST00000355354 MROH7-TTC4A0A0A0MT08 1334 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 PRKAB2O43741 272 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 EDIL3O43854 480 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 LRRN2O75325 713 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 DPCR1Q3MIW9 517 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 PRR5LQ6MZQ0 368 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 ATG9AQ7Z3C6 839 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 SMYD4Q8IYR2 804 aaPredicted RBP6.8□□□□□ -1.32
CD47-201ENST00000355354 MAPK8IP3Q9UPT6 1336 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 NMRK2Q9NPI5 230 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 DACT1Q9NYF0 836 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 LRRC37A2A6NM11 1700 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 RIOK3O14730 519 aaKnown RBP6.8□□□□□ -1.32
CD47-201ENST00000355354 HSPA4P34932 840 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 SCRN1Q12765 414 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 NLGN1Q8N2Q7 840 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 PROCA1Q8NCQ7 364 aaPredicted RBP6.8□□□□□ -1.32
CD47-201ENST00000355354 GLIS3Q8NEA6 775 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 MAP3K2Q9Y2U5 619 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 PCDHAC2Q9Y5I4 1007 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 ARID1AO14497 2285 aa6.8□□□□□ -1.32
CD47-201ENST00000355354 SLC34A2O95436 690 aa6.79□□□□□ -1.32
CD47-201ENST00000355354 MX1P20591 662 aa6.79□□□□□ -1.32
CD47-201ENST00000355354 IL6STP40189 918 aaPredicted RBP6.79□□□□□ -1.32
CD47-201ENST00000355354 NMIQ13287 307 aaPredicted RBP6.79□□□□□ -1.32
CD47-201ENST00000355354 HDGFL1Q5TGJ6 251 aa6.79□□□□□ -1.32
CD47-201ENST00000355354 STYK1Q6J9G0 422 aa6.79□□□□□ -1.32
CD47-201ENST00000355354 C16orf45Q96MC5 204 aaPredicted RBP6.79□□□□□ -1.32
CD47-201ENST00000355354 PNNQ9H307 717 aaKnown RBP6.79□□□□□ -1.32
CD47-201ENST00000355354 ZBTB3Q9H5J0 574 aa6.79□□□□□ -1.32
CD47-201ENST00000355354 NAV1Q8NEY1 1877 aa6.79□□□□□ -1.32
CD47-201ENST00000355354 CASTP20810 708 aaKnown RBP6.79□□□□□ -1.32
CD47-201ENST00000355354 GLTPD2A6NH11 291 aa6.79□□□□□ -1.32
CD47-201ENST00000355354 APLP1P51693 650 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms