RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 AIDAQ96BJ3 306 aa13.15□□□□□ -0.3
SNU13-202ENST00000355257 GMLQ99445 158 aa13.15□□□□□ -0.3
SNU13-202ENST00000355257 PLA2G12BQ9BX93 195 aa13.15□□□□□ -0.3
SNU13-202ENST00000355257 ANKIB1Q9P2G1 1089 aa13.15□□□□□ -0.3
SNU13-202ENST00000355257 AOC2O75106 756 aa13.14□□□□□ -0.31
SNU13-202ENST00000355257 CAPN15O75808 1086 aa13.14□□□□□ -0.31
SNU13-202ENST00000355257 CAVIN1Q6NZI2 390 aaKnown RBP13.14□□□□□ -0.31
SNU13-202ENST00000355257 NOL8Q76FK4 1167 aaKnown RBP13.14□□□□□ -0.31
SNU13-202ENST00000355257 USP48Q86UV5 1035 aa13.14□□□□□ -0.31
SNU13-202ENST00000355257 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.14□□□□□ -0.31
SNU13-202ENST00000355257 PPP1R9BQ96SB3 815 aa13.14□□□□□ -0.31
SNU13-202ENST00000355257 BSDC1Q9NW68 430 aaPredicted RBP13.14□□□□□ -0.31
SNU13-202ENST00000355257 MINPP1Q9UNW1 487 aa13.14□□□□□ -0.31
SNU13-202ENST00000355257 ASTN2O75129 1339 aaPredicted RBP13.14□□□□□ -0.31
SNU13-202ENST00000355257 ZSCAN22P10073 491 aaPredicted RBP13.13□□□□□ -0.31
SNU13-202ENST00000355257 ATP2B4P23634 1241 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 MAP2K2P36507 400 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 ZNF280AP59817 542 aaPredicted RBP13.13□□□□□ -0.31
SNU13-202ENST00000355257 ANKRD1Q15327 319 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 CDC5LQ99459 802 aaKnown RBP13.13□□□□□ -0.31
SNU13-202ENST00000355257 DBNDD2Q9BQY9 259 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 SMC3Q9UQE7 1217 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 CASP8AP2Q9UKL3 1982 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 ADM5C9JUS6 153 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 EYA2O00167 538 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 STX6O43752 255 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 CSF1RP07333 972 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 SYT1P21579 422 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 KRT32Q14532 448 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 KIF4BQ2VIQ3 1234 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 RSBN1LQ6PCB5 846 aaPredicted RBP13.13□□□□□ -0.31
SNU13-202ENST00000355257 ZNF589Q86UQ0 364 aaPredicted RBP13.13□□□□□ -0.31
SNU13-202ENST00000355257 KBTBD3Q8NAB2 608 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 AGBL3Q8NEM8 1001 aa13.13□□□□□ -0.31
SNU13-202ENST00000355257 AK9Q5TCS8 1911 aa13.12□□□□□ -0.31
SNU13-202ENST00000355257 LARGE1O95461 756 aa13.12□□□□□ -0.31
SNU13-202ENST00000355257 CPA1P15085 419 aa13.12□□□□□ -0.31
SNU13-202ENST00000355257 RPS6KB1P23443 525 aa13.12□□□□□ -0.31
SNU13-202ENST00000355257 CCDC173Q0VFZ6 552 aa13.12□□□□□ -0.31
SNU13-202ENST00000355257 ST3GAL1Q11201 340 aa13.12□□□□□ -0.31
SNU13-202ENST00000355257 RBM26Q5T8P6 1007 aaKnown RBP13.12□□□□□ -0.31
SNU13-202ENST00000355257 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
SNU13-202ENST00000355257 PODNQ7Z5L7 613 aa13.12□□□□□ -0.31
SNU13-202ENST00000355257 TXNRD3Q86VQ6 643 aa13.12□□□□□ -0.31
SNU13-202ENST00000355257 ZIC5Q96T25 663 aa13.12□□□□□ -0.31
SNU13-202ENST00000355257 ZNF408Q9H9D4 720 aa13.12□□□□□ -0.31
SNU13-202ENST00000355257 TMEM63CQ9P1W3 806 aa13.12□□□□□ -0.31
SNU13-202ENST00000355257 ATP6V1DQ9Y5K8 247 aa13.12□□□□□ -0.31
SNU13-202ENST00000355257 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
SNU13-202ENST00000355257 IRS2Q9Y4H2 1338 aa13.11□□□□□ -0.31
SNU13-202ENST00000355257 ECM29Q5VYK3 1845 aa13.11□□□□□ -0.31
SNU13-202ENST00000355257 NCLP19338 710 aaKnown RBP13.11□□□□□ -0.31
SNU13-202ENST00000355257 KCNJ4P48050 445 aa13.11□□□□□ -0.31
SNU13-202ENST00000355257 NASPP49321 788 aaPredicted RBP13.11□□□□□ -0.31
SNU13-202ENST00000355257 GRM1Q13255 1194 aa13.11□□□□□ -0.31
SNU13-202ENST00000355257 ME3Q16798 604 aa13.11□□□□□ -0.31
SNU13-202ENST00000355257 MCMDC2Q4G0Z9 681 aa13.11□□□□□ -0.31
SNU13-202ENST00000355257 LRSAM1Q6UWE0 723 aa13.11□□□□□ -0.31
SNU13-202ENST00000355257 KRT26Q7Z3Y9 468 aa13.11□□□□□ -0.31
SNU13-202ENST00000355257 UBE2Q2Q8WVN8 375 aa13.11□□□□□ -0.31
SNU13-202ENST00000355257 AKAP11Q9UKA4 1901 aa13.11□□□□□ -0.31
SNU13-202ENST00000355257 FAM155AB1AL88 458 aaPredicted RBP13.1□□□□□ -0.31
SNU13-202ENST00000355257 F13A1P00488 732 aa13.1□□□□□ -0.31
SNU13-202ENST00000355257 BLOC1S2Q6QNY1 142 aa13.1□□□□□ -0.31
SNU13-202ENST00000355257 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
SNU13-202ENST00000355257 CHAMP1Q96JM3 812 aa13.1□□□□□ -0.31
SNU13-202ENST00000355257 RTN4Q9NQC3 1192 aaKnown RBP13.1□□□□□ -0.31
SNU13-202ENST00000355257 HELLSQ9NRZ9 838 aa13.1□□□□□ -0.31
SNU13-202ENST00000355257 GGA3Q9NZ52 723 aa13.1□□□□□ -0.31
SNU13-202ENST00000355257 TPCN1Q9ULQ1 816 aa13.1□□□□□ -0.31
SNU13-202ENST00000355257 MTMR6Q9Y217 621 aa13.1□□□□□ -0.31
SNU13-202ENST00000355257 PAPPA2Q9BXP8 1791 aa13.1□□□□□ -0.31
SNU13-202ENST00000355257 USP17L3A6NCW0 530 aa13.09□□□□□ -0.31
SNU13-202ENST00000355257 USP17L4A6NCW7 530 aa13.09□□□□□ -0.31
SNU13-202ENST00000355257 ITGA6P23229 1130 aa13.09□□□□□ -0.31
SNU13-202ENST00000355257 KLRK1P26718 216 aa13.09□□□□□ -0.31
SNU13-202ENST00000355257 GJB2P29033 226 aa13.09□□□□□ -0.31
SNU13-202ENST00000355257 HUNKP57058 714 aa13.09□□□□□ -0.31
SNU13-202ENST00000355257 DACT2Q5SW24 774 aa13.09□□□□□ -0.31
SNU13-202ENST00000355257 FOXD4L5Q5VV16 416 aaPredicted RBP13.09□□□□□ -0.31
SNU13-202ENST00000355257 USP17L1Q7RTZ2 530 aa13.09□□□□□ -0.31
SNU13-202ENST00000355257 CCDC83Q8IWF9 413 aa13.09□□□□□ -0.31
SNU13-202ENST00000355257 FOXD4L4Q8WXT5 416 aaPredicted RBP13.09□□□□□ -0.31
SNU13-202ENST00000355257 SYAP1Q96A49 352 aaPredicted RBP13.09□□□□□ -0.31
SNU13-202ENST00000355257 DCPSQ96C86 337 aaKnown RBP13.09□□□□□ -0.31
SNU13-202ENST00000355257 GBA2Q9HCG7 927 aaPredicted RBP13.09□□□□□ -0.31
SNU13-202ENST00000355257 RRAGDQ9NQL2 400 aaPredicted RBP13.09□□□□□ -0.31
SNU13-202ENST00000355257 G3V3G9 751 aa13.08□□□□□ -0.31
SNU13-202ENST00000355257 USP17L8P0C7I0 530 aa13.08□□□□□ -0.31
SNU13-202ENST00000355257 TOB2Q14106 344 aaPredicted RBP13.08□□□□□ -0.31
SNU13-202ENST00000355257 SCARF1Q14162 830 aa13.08□□□□□ -0.31
SNU13-202ENST00000355257 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.31
SNU13-202ENST00000355257 DSCC1Q9BVC3 393 aa13.08□□□□□ -0.31
SNU13-202ENST00000355257 MXD3Q9BW11 206 aa13.08□□□□□ -0.31
SNU13-202ENST00000355257 MYOZ2Q9NPC6 264 aa13.08□□□□□ -0.31
SNU13-202ENST00000355257 RBM27Q9P2N5 1060 aaKnown RBP13.08□□□□□ -0.31
SNU13-202ENST00000355257 LEMD3Q9Y2U8 911 aa13.08□□□□□ -0.31
SNU13-202ENST00000355257 IGHMBP2P38935 993 aaKnown RBP13.08□□□□□ -0.32
SNU13-202ENST00000355257 CSPP1Q1MSJ5 1256 aa13.08□□□□□ -0.32
SNU13-202ENST00000355257 LRRC24Q50LG9 513 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms