RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 CCDC102BQ68D86 513 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 FERMT2Q96AC1 680 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 MMRN2Q9H8L6 949 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 RNF181Q9P0P0 153 aa11.11□□□□□ -0.63
GABPA-201ENST00000354828 STAT6P42226 847 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 USH1GQ495M9 461 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 VSIG10Q8N0Z9 540 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 PTCH1Q13635 1447 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 KRT2P35908 639 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 VPS36Q86VN1 386 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 FAM212AQ96EL1 285 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 EXOC1Q9NV70 894 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 SETD1BQ9UPS6 1966 aaKnown RBP11.1□□□□□ -0.63
GABPA-201ENST00000354828 C1orf167Q5SNV9 1468 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 TFAP4Q01664 338 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 PLEKHM2Q8IWE5 1019 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 ATG3Q9NT62 314 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 TRIM75PA6NK02 468 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 CCP110O43303 1012 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 CETN2P41208 172 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 NLRP10Q86W26 655 aa11.1□□□□□ -0.63
GABPA-201ENST00000354828 RIMS1Q86UR5 1692 aaKnown RBP11.1□□□□□ -0.63
GABPA-201ENST00000354828 ADRA2BP18089 450 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 USP37Q86T82 979 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 ANO10Q9NW15 660 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 CDC42BPGQ6DT37 1551 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 ADAMTS13Q76LX8 1427 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 PRKCSHP14314 528 aaPredicted RBP11.09□□□□□ -0.63
GABPA-201ENST00000354828 CHMLP26374 656 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 BEND3Q5T5X7 828 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 NARFQ9UHQ1 456 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 USP17L12C9JPN9 530 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 USP17L21D6R901 530 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 BIN1O00499 593 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 CFBP00751 764 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 CERKLQ49MI3 558 aaPredicted RBP11.09□□□□□ -0.63
GABPA-201ENST00000354828 FILIP1Q7Z7B0 1213 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 CHURC1Q8WUH1 139 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 TNPO1Q92973 898 aaKnown RBP11.09□□□□□ -0.63
GABPA-201ENST00000354828 USP44Q9H0E7 712 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 CLEC4GQ6UXB4 293 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 ZSCAN16Q9H4T2 348 aaPredicted RBP11.09□□□□□ -0.63
GABPA-201ENST00000354828 CRB1P82279 1406 aa11.09□□□□□ -0.63
GABPA-201ENST00000354828 CHMP2AO43633 222 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 PDE8BO95263 885 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 MCM7P33993 719 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 ANAPC15P60006 121 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 MKRN3Q13064 507 aaKnown RBP11.08□□□□□ -0.64
GABPA-201ENST00000354828 ARHGEF1Q92888 912 aaKnown RBP11.08□□□□□ -0.64
GABPA-201ENST00000354828 ARPP21Q9UBL0 812 aaPredicted RBP11.08□□□□□ -0.64
GABPA-201ENST00000354828 FAM13AO94988 1023 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 MRE11P49959 708 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 GRAPQ13588 217 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 TAF12Q16514 161 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 FAM47AQ5JRC9 791 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 KANK3Q6NY19 840 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 GRAPLQ8TC17 118 aaPredicted RBP11.08□□□□□ -0.64
GABPA-201ENST00000354828 TULP4Q9NRJ4 1543 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 AFMP43652 599 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 CDR1P51861 262 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 LETM2Q2VYF4 491 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 KIAA1328Q86T90 577 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 TMX3Q96JJ7 454 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 ZC3H13Q5T200 1668 aaKnown RBP11.08□□□□□ -0.64
GABPA-201ENST00000354828 IBTKQ9P2D0 1353 aaPredicted RBP11.08□□□□□ -0.64
GABPA-201ENST00000354828 CEP170BQ9Y4F5 1589 aaPredicted RBP11.08□□□□□ -0.64
GABPA-201ENST00000354828 FAM47CQ5HY64 1035 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 SUSD4Q5VX71 490 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 TMEM87BQ96K49 555 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 CSRNP1Q96S65 589 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 GDPD2Q9HCC8 539 aa11.08□□□□□ -0.64
GABPA-201ENST00000354828 EPB41L2O43491 1005 aaKnown RBP11.07□□□□□ -0.64
GABPA-201ENST00000354828 PLCD3Q8N3E9 789 aa11.07□□□□□ -0.64
GABPA-201ENST00000354828 PUS3Q9BZE2 481 aaKnown RBP11.07□□□□□ -0.64
GABPA-201ENST00000354828 AZI2Q9H6S1 392 aa11.07□□□□□ -0.64
GABPA-201ENST00000354828 NCAPG2Q86XI2 1143 aa11.07□□□□□ -0.64
GABPA-201ENST00000354828 FAM177A1Q8N128 213 aaPredicted RBP11.07□□□□□ -0.64
GABPA-201ENST00000354828 NAP1L4Q99733 375 aaKnown RBP11.07□□□□□ -0.64
GABPA-201ENST00000354828 KRT13P13646 458 aa11.07□□□□□ -0.64
GABPA-201ENST00000354828 ASIC1P78348 528 aa11.07□□□□□ -0.64
GABPA-201ENST00000354828 OTUD7AQ8TE49 926 aaPredicted RBP11.07□□□□□ -0.64
GABPA-201ENST00000354828 FAM227BQ96M60 508 aa11.07□□□□□ -0.64
GABPA-201ENST00000354828 PIK3C2BO00750 1634 aa11.07□□□□□ -0.64
GABPA-201ENST00000354828 V9GY48 417 aaPredicted RBP11.07□□□□□ -0.64
GABPA-201ENST00000354828 USP17L3A6NCW0 530 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 USP17L4A6NCW7 530 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 MARCKSP29966 332 aaPredicted RBP11.06□□□□□ -0.64
GABPA-201ENST00000354828 TDRD12Q587J7 1177 aaKnown RBP11.06□□□□□ -0.64
GABPA-201ENST00000354828 USP17L1Q7RTZ2 530 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 DHX37Q8IY37 1157 aaKnown RBP11.06□□□□□ -0.64
GABPA-201ENST00000354828 FLOT1O75955 427 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 ALAS1P13196 640 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 PHKA1P46020 1223 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 ISM2Q6H9L7 571 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 TAF4BQ92750 862 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 GLT8D2Q9H1C3 349 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 CTAGE5O15320 804 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 ICA1Q05084 483 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 SPA17Q15506 151 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms