RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 BMP2P12643 396 aa2.3□□□□□ -2.04
BRCA1-202ENST00000354071 BAG6P46379 1132 aa2.3□□□□□ -2.04
BRCA1-202ENST00000354071 PLAURQ03405 335 aa2.3□□□□□ -2.04
BRCA1-202ENST00000354071 AGMOQ6ZNB7 445 aa2.3□□□□□ -2.04
BRCA1-202ENST00000354071 FCHSD1Q86WN1 690 aa2.3□□□□□ -2.04
BRCA1-202ENST00000354071 NKD1Q969G9 470 aa2.3□□□□□ -2.04
BRCA1-202ENST00000354071 ACDQ96AP0 544 aa2.3□□□□□ -2.04
BRCA1-202ENST00000354071 SRCIN1Q9C0H9 1055 aa2.3□□□□□ -2.04
BRCA1-202ENST00000354071 TIMMDC1Q9NPL8 285 aa2.3□□□□□ -2.04
BRCA1-202ENST00000354071 SIRPGQ9P1W8 387 aa2.3□□□□□ -2.04
BRCA1-202ENST00000354071 FNDC3AQ9Y2H6 1198 aaKnown RBP2.3□□□□□ -2.04
BRCA1-202ENST00000354071 POLR3KQ9Y2Y1 108 aaPredicted RBP2.3□□□□□ -2.04
BRCA1-202ENST00000354071 UPK3BL1B0FP48 263 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 UPK3BL2E5RIL1 263 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 CDC25BP30305 580 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 TTC39BQ5VTQ0 682 aaPredicted RBP2.29□□□□□ -2.04
BRCA1-202ENST00000354071 ZNF787Q6DD87 383 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 LYSMD3Q7Z3D4 306 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 PRPF38AQ8NAV1 312 aaKnown RBP2.29□□□□□ -2.04
BRCA1-202ENST00000354071 OR13H1Q8NG92 308 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 KIFC2Q96AC6 838 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 RASSF4Q9H2L5 321 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 GPN3Q9UHW5 284 aaPredicted RBP2.29□□□□□ -2.04
BRCA1-202ENST00000354071 PDPK1O15530 556 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 FAM157BP0CG42 384 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 CD33P20138 364 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 MTERF2Q49AM1 385 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 TRIM42Q8IWZ5 723 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 CEP120Q8N960 986 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 GAL3ST3Q96A11 431 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 SGSM3Q96HU1 749 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 FERD3LQ96RJ6 166 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 TMEM260Q9NX78 707 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 KDM2BQ8NHM5 1336 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 ADAMTSL3P82987 1691 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 LOC102724159A0A0B4J2E5 919 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 GIPC1O14908 333 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 DDAH1O94760 285 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 PSAPP07602 524 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 GIPRP48546 466 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 LBRQ14739 615 aaKnown RBP2.29□□□□□ -2.04
BRCA1-202ENST00000354071 PWP2Q15269 919 aaKnown RBP2.29□□□□□ -2.04
BRCA1-202ENST00000354071 ODR4Q5SWX8 454 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 LHFPL2Q6ZUX7 228 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 NLRP8Q86W28 1048 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 SLITRK4Q8IW52 837 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 FAM9AQ8IZU1 332 aaPredicted RBP2.29□□□□□ -2.04
BRCA1-202ENST00000354071 SETD1AO15047 1707 aaKnown RBP2.29□□□□□ -2.04
BRCA1-202ENST00000354071 A0A1B0GTH6 734 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 PDGFRBP09619 1106 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 ACRP10323 421 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 IBSPP21815 317 aaPredicted RBP2.29□□□□□ -2.04
BRCA1-202ENST00000354071 BMP6P22004 513 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 L1CAMP32004 1257 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 DGKGP49619 791 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 SOGA3Q5TF21 947 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 REC114Q7Z4M0 266 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 APPBP2Q92624 585 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 TNFRSF25Q93038 417 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 BHMTQ93088 406 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 ZNF576Q9H609 170 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 FAM13BQ9NYF5 915 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 ACTR10Q9NZ32 417 aa2.29□□□□□ -2.04
BRCA1-202ENST00000354071 SMARCA4P51532 1647 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 KHNYNO15037 678 aaKnown RBP2.28□□□□□ -2.04
BRCA1-202ENST00000354071 S100BP04271 92 aaPredicted RBP2.28□□□□□ -2.04
BRCA1-202ENST00000354071 NEFLP07196 543 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 FAM153BP0C7A2 387 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 GTF2E1P29083 439 aaPredicted RBP2.28□□□□□ -2.04
BRCA1-202ENST00000354071 POLR2BP30876 1174 aaKnown RBP2.28□□□□□ -2.04
BRCA1-202ENST00000354071 EIF6P56537 245 aaKnown RBP2.28□□□□□ -2.04
BRCA1-202ENST00000354071 LMNB2Q03252 620 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 ZNF423Q2M1K9 1284 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 NBPF6Q5VWK0 638 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 ABHD17AQ96GS6 310 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 NBPF4Q96M43 638 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 POP1Q99575 1024 aaKnown RBP2.28□□□□□ -2.04
BRCA1-202ENST00000354071 CACNA2D2Q9NY47 1150 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 STK17AQ9UEE5 414 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 RIPOR2Q9Y4F9 1068 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 PCDHB14Q9Y5E9 798 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 ADGRL1O94910 1474 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 WDR62O43379 1518 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 A0A096LPE4 126 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 A0A1W2PPZ6 126 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 EDN3P14138 238 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 TXNDC11Q6PKC3 985 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 PMM1Q92871 262 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 MKL1Q969V6 931 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 R3HCC1Q9Y3T6 440 aaKnown RBP2.28□□□□□ -2.04
BRCA1-202ENST00000354071 GJA3Q9Y6H8 435 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 LTBP3Q9NS15 1303 aa2.28□□□□□ -2.04
BRCA1-202ENST00000354071 PHF20L1A8MW92 1017 aa2.28□□□□□ -2.05
BRCA1-202ENST00000354071 F11P03951 625 aa2.28□□□□□ -2.05
BRCA1-202ENST00000354071 RPLP1P05386 114 aaKnown RBP2.28□□□□□ -2.05
BRCA1-202ENST00000354071 TBC1D8BQ0IIM8 1120 aa2.28□□□□□ -2.05
BRCA1-202ENST00000354071 STRA8Q7Z7C7 330 aa2.28□□□□□ -2.05
BRCA1-202ENST00000354071 GATAD2BQ8WXI9 593 aa2.28□□□□□ -2.05
BRCA1-202ENST00000354071 NXPE3Q969Y0 559 aa2.28□□□□□ -2.05
BRCA1-202ENST00000354071 EVI5LQ96CN4 794 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms