RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 FYB2Q5VWT5 728 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 NAA16Q6N069 864 aaPredicted RBP5.64□□□□□ -1.51
SKP1-202ENST00000353411 FCHSD2O94868 740 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 LMNAP02545 664 aaKnown RBP5.64□□□□□ -1.51
SKP1-202ENST00000353411 SAFB2Q14151 953 aaKnown RBP eCLIP5.64□□□□□ -1.51
SKP1-202ENST00000353411 GNPTABQ3T906 1256 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 ZFYVE27Q5T4F4 411 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 NBPF14Q5TI25 921 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 GRAMD4Q6IC98 578 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 UBAC1Q9BSL1 405 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 PIK3C2GO75747 1445 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 CROCCQ5TZA2 2017 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 HNRNPH1P31943 449 aaKnown RBP5.63□□□□□ -1.51
SKP1-202ENST00000353411 RFC1P35251 1148 aaPredicted RBP5.63□□□□□ -1.51
SKP1-202ENST00000353411 HOOK2Q96ED9 719 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 PPP1R9AQ9ULJ8 1098 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 RNF8O76064 485 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 ATP2B2Q01814 1243 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 TMED1Q13445 227 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 NME8Q8N427 588 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 TMEM87AQ8NBN3 555 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 ARHGEF2Q92974 986 aaKnown RBP5.63□□□□□ -1.51
SKP1-202ENST00000353411 CCDC42Q96M95 316 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 PLVAPQ9BX97 442 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 KLHL14Q9P2G3 628 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 SSH2Q76I76 1423 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 CFAP73A6NFT4 308 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 SLC4A2P04920 1241 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 TDRD12Q587J7 1177 aaKnown RBP5.63□□□□□ -1.51
SKP1-202ENST00000353411 KLHL23Q8NBE8 558 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 FBXO41Q8TF61 875 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 ABTB1Q969K4 478 aaPredicted RBP5.63□□□□□ -1.51
SKP1-202ENST00000353411 EVI5LQ96CN4 794 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 MTUS1Q9ULD2 1270 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 STK38LQ9Y2H1 464 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 OPHN1O60890 802 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 PDE1CQ14123 709 aaPredicted RBP5.63□□□□□ -1.51
SKP1-202ENST00000353411 PLEKHM2Q8IWE5 1019 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 CNOT10Q9H9A5 744 aaKnown RBP5.63□□□□□ -1.51
SKP1-202ENST00000353411 TRIM35Q9UPQ4 493 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 MYH9P35579 1960 aaKnown RBP5.63□□□□□ -1.51
SKP1-202ENST00000353411 NUMA1Q14980 2115 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 HNRNPCP07910 306 aaKnown RBP eCLIP5.63□□□□□ -1.51
SKP1-202ENST00000353411 TROVE2P10155 538 aaKnown RBP eCLIP5.63□□□□□ -1.51
SKP1-202ENST00000353411 AK2P54819 239 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 MLECQ14165 292 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 UGGT2Q9NYU1 1516 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 ADGRL1O94910 1474 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 CLUL1Q15846 466 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 CCDC62Q6P9F0 684 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 XPO4Q9C0E2 1151 aaKnown RBP5.63□□□□□ -1.51
SKP1-202ENST00000353411 VIPAS39Q9H9C1 493 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 SAMM50Q9Y512 469 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 PDE1AP54750 535 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 CFAP221Q4G0U5 840 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 IGSF22Q8N9C0 903 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 FGD4Q96M96 766 aa5.63□□□□□ -1.51
SKP1-202ENST00000353411 MEFVO15553 781 aaPredicted RBP5.62□□□□□ -1.51
SKP1-202ENST00000353411 EPHB4P54760 987 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 NLRP12P59046 1061 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 WASHC4Q2M389 1173 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 RCSD1Q6JBY9 416 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 SARM1Q6SZW1 724 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 BRAPQ7Z569 592 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 OLFM3Q96PB7 478 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 DCTPP1Q9H773 170 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 SPTLC2O15270 562 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 SGSM2O43147 1006 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 TSG101Q99816 390 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 EXOC6BQ9Y2D4 811 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 ITSN2Q9NZM3 1697 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 SUN1O94901 812 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 KCNJ6P48051 423 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 RBM6P78332 1123 aaKnown RBP5.62□□□□□ -1.51
SKP1-202ENST00000353411 LEO1Q8WVC0 666 aaPredicted RBP5.62□□□□□ -1.51
SKP1-202ENST00000353411 PLEKHG2Q9H7P9 1386 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 PRKAR2BP31323 418 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 ATP1A2P50993 1020 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 ICA1Q05084 483 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 SFSWAPQ12872 951 aaKnown RBP5.62□□□□□ -1.51
SKP1-202ENST00000353411 MAP3K21Q5TCX8 1036 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 ENO4A6NNW6 628 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 SPECC1L-ADORA2AF8WAN1 911 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 HIBCHQ6NVY1 386 aaPredicted RBP5.62□□□□□ -1.51
SKP1-202ENST00000353411 PLEKHA4Q9H4M7 779 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 UTP11Q9Y3A2 253 aaKnown RBP5.62□□□□□ -1.51
SKP1-202ENST00000353411 BMP15O95972 392 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 ST5P78524 1137 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 RETREG2Q8NC44 543 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 JAKMIP2Q96AA8 810 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.62□□□□□ -1.51
SKP1-202ENST00000353411 ABCA5Q8WWZ7 1642 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 TPD52L2O43399 206 aaKnown RBP5.62□□□□□ -1.51
SKP1-202ENST00000353411 ACTN4O43707 911 aaKnown RBP5.62□□□□□ -1.51
SKP1-202ENST00000353411 SCP2P22307 547 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 NOP2P46087 812 aaKnown RBP5.62□□□□□ -1.51
SKP1-202ENST00000353411 ST13P4Q8IZP2 240 aaPredicted RBP5.62□□□□□ -1.51
SKP1-202ENST00000353411 ZNF518AQ6AHZ1 1483 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 USP19O94966 1318 aa5.62□□□□□ -1.51
SKP1-202ENST00000353411 MTIF2P46199 727 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms