RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 CTDSPL2Q05D32 466 aa23.83■■□□□ 1.4
CHRNA3-202ENST00000348639 FUCA2Q9BTY2 467 aa23.83■■□□□ 1.4
CHRNA3-202ENST00000348639 KRT23Q9C075 422 aa23.83■■□□□ 1.4
CHRNA3-202ENST00000348639 RAI14Q9P0K7 980 aa23.83■■□□□ 1.4
CHRNA3-202ENST00000348639 ORC3Q9UBD5 711 aaPredicted RBP23.83■■□□□ 1.4
CHRNA3-202ENST00000348639 TM4SF1P30408 202 aa23.82■■□□□ 1.4
CHRNA3-202ENST00000348639 GIMAP6Q6P9H5 292 aa23.82■■□□□ 1.4
CHRNA3-202ENST00000348639 SGMS1Q86VZ5 419 aa23.82■■□□□ 1.4
CHRNA3-202ENST00000348639 STAG1Q8WVM7 1258 aa23.82■■□□□ 1.4
CHRNA3-202ENST00000348639 PGBD1Q96JS3 809 aa23.82■■□□□ 1.4
CHRNA3-202ENST00000348639 TRIM37O94972 964 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 KLRK1P26718 216 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 APOA5Q6Q788 366 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 MFSD6Q6ZSS7 791 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 KRT27Q7Z3Y8 459 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 ADGRA1Q86SQ6 560 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 RGS22Q8NE09 1264 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 ZNF396Q96N95 335 aaPredicted RBP23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 LY9Q9HBG7 655 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 INCENPQ9NQS7 918 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 RCOR1Q9UKL0 485 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 LIFRP42702 1097 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 METAP2P50579 478 aaKnown RBP eCLIP23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 GUCY1B3Q02153 619 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 UVSSAQ2YD98 709 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 RAB11FIP4Q86YS3 637 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 CNBD1Q8NA66 436 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 C8orf76Q96K31 380 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 ZSWIM5Q9P217 1185 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 TACC3Q9Y6A5 838 aa23.81■■□□□ 1.4
CHRNA3-202ENST00000348639 PDS5AQ29RF7 1337 aaKnown RBP23.8■■□□□ 1.4
CHRNA3-202ENST00000348639 MAGEB6P1A0A0J9YX57 407 aa23.8■■□□□ 1.4
CHRNA3-202ENST00000348639 FBXO18Q8NFZ0 1043 aa23.8■■□□□ 1.4
CHRNA3-202ENST00000348639 NUP62CLQ9H1M0 184 aa23.8■■□□□ 1.4
CHRNA3-202ENST00000348639 MYH15Q9Y2K3 1946 aa23.8■■□□□ 1.4
CHRNA3-202ENST00000348639 ESPNB1AK53 854 aa23.79■■□□□ 1.4
CHRNA3-202ENST00000348639 KDM4AO75164 1064 aa23.79■■□□□ 1.4
CHRNA3-202ENST00000348639 TMEM67Q5HYA8 995 aa23.79■■□□□ 1.4
CHRNA3-202ENST00000348639 ILDR1Q86SU0 546 aaPredicted RBP23.79■■□□□ 1.4
CHRNA3-202ENST00000348639 DDX19AQ9NUU7 478 aaKnown RBP23.79■■□□□ 1.4
CHRNA3-202ENST00000348639 CDKL5O76039 1030 aa23.79■■□□□ 1.4
CHRNA3-202ENST00000348639 ADRA2BP18089 450 aa23.79■■□□□ 1.4
CHRNA3-202ENST00000348639 SENP2Q9HC62 589 aa23.79■■□□□ 1.4
CHRNA3-202ENST00000348639 DACT1Q9NYF0 836 aa23.79■■□□□ 1.4
CHRNA3-202ENST00000348639 TFCP2L1Q9NZI6 479 aa23.79■■□□□ 1.4
CHRNA3-202ENST00000348639 CHD4Q14839 1912 aa23.79■■□□□ 1.4
CHRNA3-202ENST00000348639 RIOK1Q9BRS2 568 aaKnown RBP23.78■■□□□ 1.4
CHRNA3-202ENST00000348639 CACNA1SQ13698 1873 aa23.78■■□□□ 1.4
CHRNA3-202ENST00000348639 IFIT3O14879 490 aaKnown RBP23.77■■□□□ 1.4
CHRNA3-202ENST00000348639 ZBTB43O43298 467 aa23.77■■□□□ 1.4
CHRNA3-202ENST00000348639 HIBADHP31937 336 aaKnown RBP23.77■■□□□ 1.4
CHRNA3-202ENST00000348639 HS1BP3Q53T59 392 aa23.77■■□□□ 1.4
CHRNA3-202ENST00000348639 NFXL1Q6ZNB6 911 aa23.77■■□□□ 1.4
CHRNA3-202ENST00000348639 BICD2Q8TD16 824 aa23.77■■□□□ 1.4
CHRNA3-202ENST00000348639 USP28Q96RU2 1077 aa23.77■■□□□ 1.4
CHRNA3-202ENST00000348639 MTA3Q9BTC8 594 aa23.77■■□□□ 1.4
CHRNA3-202ENST00000348639 RNF41Q9H4P4 317 aaPredicted RBP23.77■■□□□ 1.4
CHRNA3-202ENST00000348639 MAP3K11Q16584 847 aa23.77■■□□□ 1.4
CHRNA3-202ENST00000348639 CPLX2Q6PUV4 134 aaKnown RBP23.77■■□□□ 1.4
CHRNA3-202ENST00000348639 TNRC6CQ9HCJ0 1690 aaKnown RBP23.77■■□□□ 1.4
CHRNA3-202ENST00000348639 ZBTB22O15209 634 aa23.76■■□□□ 1.39
CHRNA3-202ENST00000348639 CEBPZQ03701 1054 aaKnown RBP23.76■■□□□ 1.39
CHRNA3-202ENST00000348639 PPARAQ07869 468 aa23.76■■□□□ 1.39
CHRNA3-202ENST00000348639 ANAPC4Q9UJX5 808 aa23.76■■□□□ 1.39
CHRNA3-202ENST00000348639 CCDC192P0DO97 292 aa23.76■■□□□ 1.39
CHRNA3-202ENST00000348639 SLC27A3Q5K4L6 730 aa23.76■■□□□ 1.39
CHRNA3-202ENST00000348639 MICU3Q86XE3 530 aa23.76■■□□□ 1.39
CHRNA3-202ENST00000348639 CDC27P30260 824 aa23.75■■□□□ 1.39
CHRNA3-202ENST00000348639 OTUD7BQ6GQQ9 843 aa23.75■■□□□ 1.39
CHRNA3-202ENST00000348639 ZNF384Q8TF68 577 aa23.75■■□□□ 1.39
CHRNA3-202ENST00000348639 SDR42E1Q8WUS8 393 aa23.75■■□□□ 1.39
CHRNA3-202ENST00000348639 FTOQ9C0B1 505 aaKnown RBP eCLIP23.75■■□□□ 1.39
CHRNA3-202ENST00000348639 CLSTN2Q9H4D0 955 aa23.75■■□□□ 1.39
CHRNA3-202ENST00000348639 SLC12A7Q9Y666 1083 aa23.75■■□□□ 1.39
CHRNA3-202ENST00000348639 CCDC69A6NI79 296 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 NR1I2O75469 434 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 GYS1P13807 737 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 SART3Q15020 963 aaKnown RBP23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 RBM43Q6ZSC3 357 aaKnown RBP23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 BRAPQ7Z569 592 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 TNMDQ9H2S6 317 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 ANKIB1Q9P2G1 1089 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 BRWD3Q6RI45 1802 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 GOLGA8AA7E2F4 631 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 RXRAP19793 462 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 NTRK3Q16288 839 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 CAMK4Q16566 473 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 PRR5LQ6MZQ0 368 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 STK11IPQ8N1F8 1099 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 BRIP1Q9BX63 1249 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 RTEL1Q9NZ71 1219 aa23.74■■□□□ 1.39
CHRNA3-202ENST00000348639 NID2Q14112 1375 aa23.73■■□□□ 1.39
CHRNA3-202ENST00000348639 CLCN1P35523 988 aa23.73■■□□□ 1.39
CHRNA3-202ENST00000348639 GRAPQ13588 217 aa23.73■■□□□ 1.39
CHRNA3-202ENST00000348639 RRP12Q5JTH9 1297 aaKnown RBP23.73■■□□□ 1.39
CHRNA3-202ENST00000348639 SLC51AQ86UW1 340 aa23.73■■□□□ 1.39
CHRNA3-202ENST00000348639 GRAPLQ8TC17 118 aaPredicted RBP23.73■■□□□ 1.39
CHRNA3-202ENST00000348639 NSUN4Q96CB9 384 aaKnown RBP23.73■■□□□ 1.39
CHRNA3-202ENST00000348639 TOMM22Q9NS69 142 aa23.73■■□□□ 1.39
CHRNA3-202ENST00000348639 FAM217BQ9NTX9 383 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms