RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 GPR101Q96P66 508 aaPredicted RBP18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 ZNF532Q9HCE3 1301 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 BACH1O14867 736 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 TBCAO75347 108 aaKnown RBP18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 CCDC183Q5T5S1 534 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 PTCH1Q13635 1447 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 NFIXQ14938 502 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 FNBP4Q8N3X1 1017 aaPredicted RBP18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 TMEM87BQ96K49 555 aa18.78■□□□□ 0.6
SMARCA4-201ENST00000344626 COL15A1P39059 1388 aa18.77■□□□□ 0.6
SMARCA4-201ENST00000344626 MYCP01106 439 aaPredicted RBP18.77■□□□□ 0.6
SMARCA4-201ENST00000344626 CDR1P51861 262 aa18.77■□□□□ 0.6
SMARCA4-201ENST00000344626 NCAPD2Q15021 1401 aa18.77■□□□□ 0.6
SMARCA4-201ENST00000344626 RXRAP19793 462 aa18.77■□□□□ 0.6
SMARCA4-201ENST00000344626 ZNF277Q9NRM2 450 aaPredicted RBP18.77■□□□□ 0.6
SMARCA4-201ENST00000344626 CAMK4Q16566 473 aa18.77■□□□□ 0.6
SMARCA4-201ENST00000344626 PKD2L1Q9P0L9 805 aa18.77■□□□□ 0.6
SMARCA4-201ENST00000344626 CYP19A1P11511 503 aaPredicted RBP18.77■□□□□ 0.59
SMARCA4-201ENST00000344626 SLC15A2Q16348 729 aa18.77■□□□□ 0.59
SMARCA4-201ENST00000344626 RUFY1Q96T51 708 aa18.77■□□□□ 0.59
SMARCA4-201ENST00000344626 NECAB1Q8N987 351 aa18.76■□□□□ 0.59
SMARCA4-201ENST00000344626 PANK2Q9BZ23 570 aa18.76■□□□□ 0.59
SMARCA4-201ENST00000344626 AS3MTQ9HBK9 375 aa18.76■□□□□ 0.59
SMARCA4-201ENST00000344626 ZBED4O75132 1171 aa18.76■□□□□ 0.59
SMARCA4-201ENST00000344626 ARGLU1Q9NWB6 273 aaPredicted RBP18.76■□□□□ 0.59
SMARCA4-201ENST00000344626 ABCC4O15439 1325 aa18.76■□□□□ 0.59
SMARCA4-201ENST00000344626 PTPDC1A2A3K4 754 aa18.76■□□□□ 0.59
SMARCA4-201ENST00000344626 B4E1Z4 1266 aa18.76■□□□□ 0.59
SMARCA4-201ENST00000344626 ARMC9Q7Z3E5 817 aa18.76■□□□□ 0.59
SMARCA4-201ENST00000344626 BTDP43251 543 aa18.75■□□□□ 0.59
SMARCA4-201ENST00000344626 KLHL10Q6JEL2 608 aa18.75■□□□□ 0.59
SMARCA4-201ENST00000344626 CNGA1P29973 690 aa18.75■□□□□ 0.59
SMARCA4-201ENST00000344626 TBC1D10BQ4KMP7 808 aaPredicted RBP18.75■□□□□ 0.59
SMARCA4-201ENST00000344626 SYCP3Q8IZU3 236 aa18.75■□□□□ 0.59
SMARCA4-201ENST00000344626 ACBD3Q9H3P7 528 aa18.75■□□□□ 0.59
SMARCA4-201ENST00000344626 INO80Q9ULG1 1556 aaPredicted RBP18.75■□□□□ 0.59
SMARCA4-201ENST00000344626 ZBTB21Q9ULJ3 1066 aa18.75■□□□□ 0.59
SMARCA4-201ENST00000344626 ATP5JP18859 108 aa18.75■□□□□ 0.59
SMARCA4-201ENST00000344626 ARHGEF6Q15052 776 aa18.75■□□□□ 0.59
SMARCA4-201ENST00000344626 CFAP100Q494V2 611 aa18.75■□□□□ 0.59
SMARCA4-201ENST00000344626 RUFY3Q7L099 469 aa18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 KCNG4Q8TDN1 519 aa18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 GLT8D2Q9H1C3 349 aa18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 USP17L12C9JPN9 530 aa18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 USP17L21D6R901 530 aa18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 KRT2P35908 639 aa18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 PHKA1P46020 1223 aa18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 SPC24Q8NBT2 197 aa18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 RMND1Q9NWS8 449 aa18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 MADDQ8WXG6 1647 aa18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 EDC3Q96F86 508 aaKnown RBP18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 TFIP11Q9UBB9 837 aaKnown RBP18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 IBTKQ9P2D0 1353 aaPredicted RBP18.74■□□□□ 0.59
SMARCA4-201ENST00000344626 USP17L3A6NCW0 530 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 USP17L4A6NCW7 530 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 PABPC4Q13310 644 aaKnown RBP eCLIP18.73■□□□□ 0.593e-7■■■□□ 14.6
SMARCA4-201ENST00000344626 HSP90AA2PQ14568 343 aaPredicted RBP18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 USP17L1Q7RTZ2 530 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 CCDC125Q86Z20 511 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 CSRNP1Q96S65 589 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 VPS36Q86VN1 386 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 CLIP2Q9UDT6 1046 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 SSH2Q76I76 1423 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 GINS2Q9Y248 185 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 LAMC1P11047 1609 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 RNF123Q5XPI4 1314 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 ZSCAN22P10073 491 aaPredicted RBP18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 FAM114A1Q8IWE2 563 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 SSH3Q8TE77 659 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 GPBP1L1Q9HC44 474 aaPredicted RBP18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 TCHPQ9BT92 498 aa18.73■□□□□ 0.59
SMARCA4-201ENST00000344626 USP17L8P0C7I0 530 aa18.72■□□□□ 0.59
SMARCA4-201ENST00000344626 GOPCQ9HD26 462 aa18.72■□□□□ 0.59
SMARCA4-201ENST00000344626 TRIM75PA6NK02 468 aa18.72■□□□□ 0.59
SMARCA4-201ENST00000344626 SYNE4Q8N205 404 aa18.72■□□□□ 0.59
SMARCA4-201ENST00000344626 OTUD7AQ8TE49 926 aaPredicted RBP18.72■□□□□ 0.59
SMARCA4-201ENST00000344626 KIFC2Q96AC6 838 aa18.72■□□□□ 0.59
SMARCA4-201ENST00000344626 ARPP21Q9UBL0 812 aaPredicted RBP18.72■□□□□ 0.59
SMARCA4-201ENST00000344626 TFAP4Q01664 338 aa18.72■□□□□ 0.59
SMARCA4-201ENST00000344626 APOBRQ0VD83 1088 aa18.72■□□□□ 0.59
SMARCA4-201ENST00000344626 SLC10A4Q96EP9 437 aa18.72■□□□□ 0.59
SMARCA4-201ENST00000344626 CARMIL3Q8ND23 1372 aa18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 ZC3H13Q5T200 1668 aaKnown RBP18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 CACNA2D4Q7Z3S7 1137 aa18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 USP37Q86T82 979 aa18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 BICD1Q96G01 975 aa18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 BRIP1Q9BX63 1249 aa18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 SEMA3EO15041 775 aa18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 MAP3K9P80192 1104 aa18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 CIAO1O76071 339 aa18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 MYCLP12524 364 aaPredicted RBP18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 C2orf69Q8N8R5 385 aa18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 SLC16A10Q8TF71 515 aa18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 USP31Q70CQ4 1352 aa18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 EXOC1Q9NV70 894 aa18.71■□□□□ 0.59
SMARCA4-201ENST00000344626 AOC3Q16853 763 aa18.7■□□□□ 0.58
SMARCA4-201ENST00000344626 CERKLQ49MI3 558 aaPredicted RBP18.7■□□□□ 0.58
SMARCA4-201ENST00000344626 NCBP1Q09161 790 aaKnown RBP18.7■□□□□ 0.58
SMARCA4-201ENST00000344626 DRC1Q96MC2 740 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 503.4 ms