RNA–Protein interactions for RNA: ENST00000342216.8

PKN1-202, Transcript of protein kinase N1, humanhuman

TSL 2 BASIC

Gene PKN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-202ENST00000342216 MROH7-TTC4A0A0A0MT08 1334 aa17.13■□□□□ 0.33
PKN1-202ENST00000342216 PDE4BQ07343 736 aa17.13■□□□□ 0.33
PKN1-202ENST00000342216 NEDD9Q14511 834 aa17.13■□□□□ 0.33
PKN1-202ENST00000342216 SMARCC2Q8TAQ2 1214 aa17.13■□□□□ 0.33
PKN1-202ENST00000342216 FAM76AQ8TAV0 307 aa17.13■□□□□ 0.33
PKN1-202ENST00000342216 CDC27P30260 824 aa17.13■□□□□ 0.33
PKN1-202ENST00000342216 NF2P35240 595 aa17.13■□□□□ 0.33
PKN1-202ENST00000342216 GNGT1P63211 74 aa17.13■□□□□ 0.33
PKN1-202ENST00000342216 CTAGE9A4FU28 777 aa17.12■□□□□ 0.33
PKN1-202ENST00000342216 SKAP2O75563 359 aaPredicted RBP17.12■□□□□ 0.33
PKN1-202ENST00000342216 MTHFSDQ2M296 383 aaKnown RBP17.12■□□□□ 0.33
PKN1-202ENST00000342216 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
PKN1-202ENST00000342216 GPATCH3Q96I76 525 aa17.12■□□□□ 0.33
PKN1-202ENST00000342216 VEZTQ9HBM0 779 aa17.12■□□□□ 0.33
PKN1-202ENST00000342216 SHTN1A0MZ66 631 aa17.12■□□□□ 0.33
PKN1-202ENST00000342216 GOLGA6CA6NDK9 693 aa17.12■□□□□ 0.33
PKN1-202ENST00000342216 SPTLC2O15270 562 aa17.12■□□□□ 0.33
PKN1-202ENST00000342216 GOLGA6DP0CG33 693 aa17.12■□□□□ 0.33
PKN1-202ENST00000342216 TBX2Q13207 712 aaPredicted RBP17.12■□□□□ 0.33
PKN1-202ENST00000342216 STIM1Q13586 685 aa17.12■□□□□ 0.33
PKN1-202ENST00000342216 MSL3Q8N5Y2 521 aaKnown RBP17.12■□□□□ 0.33
PKN1-202ENST00000342216 GOLGA6AQ9NYA3 693 aa17.12■□□□□ 0.33
PKN1-202ENST00000342216 MCM8Q9UJA3 840 aa17.12■□□□□ 0.33
PKN1-202ENST00000342216 HSP90AB2PQ58FF8 381 aa17.11■□□□□ 0.33
PKN1-202ENST00000342216 ACRBPQ8NEB7 543 aa17.11■□□□□ 0.33
PKN1-202ENST00000342216 SPECC1LQ69YQ0 1117 aa17.11■□□□□ 0.33
PKN1-202ENST00000342216 ODF2LQ9ULJ1 636 aa17.11■□□□□ 0.33
PKN1-202ENST00000342216 ADGRG1Q9Y653 693 aa17.11■□□□□ 0.33
PKN1-202ENST00000342216 PFKFB2O60825 505 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 ANXA1P04083 346 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 EIF2S2P20042 333 aaKnown RBP17.1■□□□□ 0.33
PKN1-202ENST00000342216 CEP57Q86XR8 500 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 RAB11FIP4Q86YS3 637 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 RTEL1Q9NZ71 1219 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 PTPRMP28827 1452 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 USP42Q9H9J4 1324 aaKnown RBP17.1■□□□□ 0.33
PKN1-202ENST00000342216 A0A1W2PQ27 194 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 A0A1W2PQ64 194 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 A0A1W2PQD8 194 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 MAP2K1Q02750 393 aaPredicted RBP17.1■□□□□ 0.33
PKN1-202ENST00000342216 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
PKN1-202ENST00000342216 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.1■□□□□ 0.333e-7■■□□□ 13.6
PKN1-202ENST00000342216 CAPS2Q9BXY5 557 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 TAF5LO75529 589 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 SSBP05455 408 aaKnown RBP eCLIP17.1■□□□□ 0.33
PKN1-202ENST00000342216 PPARDQ03181 441 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 OTUD6BQ8N6M0 293 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 CRACR2AQ9BSW2 395 aa17.1■□□□□ 0.33
PKN1-202ENST00000342216 ZC3H4Q9UPT8 1303 aaKnown RBP17.09■□□□□ 0.33
PKN1-202ENST00000342216 C21orf2O43822 256 aa17.09■□□□□ 0.33
PKN1-202ENST00000342216 SHOX2O60902 331 aaPredicted RBP17.09■□□□□ 0.33
PKN1-202ENST00000342216 AARSP49588 968 aaKnown RBP eCLIP17.09■□□□□ 0.334e-6■■■■■ 30.6
PKN1-202ENST00000342216 TRDNQ13061 729 aa17.09■□□□□ 0.33
PKN1-202ENST00000342216 OLFM4Q6UX06 510 aa17.09■□□□□ 0.33
PKN1-202ENST00000342216 TEX13AQ9BXU3 409 aaPredicted RBP17.09■□□□□ 0.33
PKN1-202ENST00000342216 ALDH8A1Q9H2A2 487 aaPredicted RBP17.09■□□□□ 0.33
PKN1-202ENST00000342216 FOXN1O15353 648 aa17.09■□□□□ 0.33
PKN1-202ENST00000342216 CYP21A2P08686 494 aa17.09■□□□□ 0.33
PKN1-202ENST00000342216 MYBL2P10244 700 aa17.09■□□□□ 0.33
PKN1-202ENST00000342216 FNTAP49354 379 aa17.09■□□□□ 0.33
PKN1-202ENST00000342216 STOX1Q6ZVD7 989 aa17.09■□□□□ 0.33
PKN1-202ENST00000342216 COL15A1P39059 1388 aa17.08■□□□□ 0.33
PKN1-202ENST00000342216 AGPSO00116 658 aa17.08■□□□□ 0.33
PKN1-202ENST00000342216 CEP120Q8N960 986 aa17.08■□□□□ 0.33
PKN1-202ENST00000342216 EAF2Q96CJ1 260 aaPredicted RBP17.08■□□□□ 0.33
PKN1-202ENST00000342216 CALR3Q96L12 384 aaKnown RBP17.08■□□□□ 0.33
PKN1-202ENST00000342216 GRIN2DO15399 1336 aa17.08■□□□□ 0.33
PKN1-202ENST00000342216 AGLP35573 1532 aa17.08■□□□□ 0.32
PKN1-202ENST00000342216 XRN1Q8IZH2 1706 aaKnown RBP17.08■□□□□ 0.32
PKN1-202ENST00000342216 KIAA0754O94854 1291 aa17.08■□□□□ 0.32
PKN1-202ENST00000342216 SYKP43405 635 aa17.08■□□□□ 0.32
PKN1-202ENST00000342216 FKBP15Q5T1M5 1219 aa17.08■□□□□ 0.32
PKN1-202ENST00000342216 NDUFAB1O14561 156 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 ENC1O14682 589 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 RNF187Q5TA31 235 aaPredicted RBP17.07■□□□□ 0.32
PKN1-202ENST00000342216 CAPZA3Q96KX2 299 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 HMG20BQ9P0W2 317 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 HDAC6Q9UBN7 1215 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 NFE2L3Q9Y4A8 694 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 ARHGEF10O15013 1369 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 MYH15Q9Y2K3 1946 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 ABCC6O95255 1503 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 A0A0G2JLW4 131 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 EIF3HO15372 352 aaKnown RBP eCLIP17.07■□□□□ 0.32
PKN1-202ENST00000342216 PDCLQ13371 301 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 HSP90AB4PQ58FF6 505 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 IQCA1Q86XH1 822 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 CCDC148Q8NFR7 591 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 NAPGQ99747 312 aaPredicted RBP17.07■□□□□ 0.32
PKN1-202ENST00000342216 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.07■□□□□ 0.32
PKN1-202ENST00000342216 CHUKO15111 745 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 TEX33O43247 280 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 BMP6P22004 513 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 FMR1Q06787 632 aaKnown RBP eCLIP17.07■□□□□ 0.329e-7■■■■□ 19.6
PKN1-202ENST00000342216 TEFQ10587 303 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 COG1Q8WTW3 980 aa17.07■□□□□ 0.32
PKN1-202ENST00000342216 CRYBG1Q9Y4K1 1723 aa17.06■□□□□ 0.32
PKN1-202ENST00000342216 SRGAP2O75044 1071 aa17.06■□□□□ 0.32
PKN1-202ENST00000342216 SARNPP82979 210 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms