RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 TRMT112Q9UI30 125 aaKnown RBP20.64■□□□□ 0.89
IFFO1-201ENST00000336604 SH2B2O14492 632 aaPredicted RBP20.63■□□□□ 0.89
IFFO1-201ENST00000336604 PDE8BO95263 885 aa20.63■□□□□ 0.89
IFFO1-201ENST00000336604 CMA1P23946 247 aa20.63■□□□□ 0.89
IFFO1-201ENST00000336604 HELBQ8NG08 1087 aaPredicted RBP20.63■□□□□ 0.89
IFFO1-201ENST00000336604 XPO4Q9C0E2 1151 aaKnown RBP20.63■□□□□ 0.89
IFFO1-201ENST00000336604 SMC2O95347 1197 aa20.63■□□□□ 0.89
IFFO1-201ENST00000336604 MYL10Q9BUA6 226 aa20.63■□□□□ 0.89
IFFO1-201ENST00000336604 IFNKQ9P0W0 207 aa20.63■□□□□ 0.89
IFFO1-201ENST00000336604 AKAP11Q9UKA4 1901 aa20.62■□□□□ 0.89
IFFO1-201ENST00000336604 UBE2Q2LH0YL09 131 aa20.62■□□□□ 0.89
IFFO1-201ENST00000336604 PDE6AP16499 860 aa20.62■□□□□ 0.89
IFFO1-201ENST00000336604 SLC39A14Q15043 492 aa20.62■□□□□ 0.89
IFFO1-201ENST00000336604 TTF1Q15361 905 aaPredicted RBP20.62■□□□□ 0.89
IFFO1-201ENST00000336604 KRT40Q6A162 431 aa20.62■□□□□ 0.89
IFFO1-201ENST00000336604 NYAP1Q6ZVC0 841 aa20.62■□□□□ 0.89
IFFO1-201ENST00000336604 SLC4A9Q96Q91 983 aa20.62■□□□□ 0.89
IFFO1-201ENST00000336604 SLAIN2Q9P270 581 aa20.62■□□□□ 0.89
IFFO1-201ENST00000336604 UBE3CQ15386 1083 aa20.62■□□□□ 0.89
IFFO1-201ENST00000336604 PTPN14Q15678 1187 aa20.62■□□□□ 0.89
IFFO1-201ENST00000336604 ZBTB1Q9Y2K1 713 aa20.61■□□□□ 0.89
IFFO1-201ENST00000336604 ZNF512BQ96KM6 892 aaPredicted RBP20.61■□□□□ 0.89
IFFO1-201ENST00000336604 BPIFA3Q9BQP9 254 aa20.61■□□□□ 0.89
IFFO1-201ENST00000336604 CGNQ9P2M7 1197 aaKnown RBP20.61■□□□□ 0.89
IFFO1-201ENST00000336604 DDX60Q8IY21 1712 aaKnown RBP20.61■□□□□ 0.89
IFFO1-201ENST00000336604 ATRNO75882 1429 aa20.61■□□□□ 0.89
IFFO1-201ENST00000336604 SNAP23O00161 211 aa20.61■□□□□ 0.89
IFFO1-201ENST00000336604 NLRP12P59046 1061 aa20.61■□□□□ 0.89
IFFO1-201ENST00000336604 NCAPHQ15003 741 aa20.61■□□□□ 0.89
IFFO1-201ENST00000336604 MYH7P12883 1935 aa20.6■□□□□ 0.89
IFFO1-201ENST00000336604 TCRBV5S4A2TA0A5A2 114 aa20.6■□□□□ 0.89
IFFO1-201ENST00000336604 GNL2Q13823 731 aaKnown RBP20.6■□□□□ 0.89
IFFO1-201ENST00000336604 NFXL1Q6ZNB6 911 aa20.6■□□□□ 0.89
IFFO1-201ENST00000336604 CCAR2Q8N163 923 aaKnown RBP20.6■□□□□ 0.89
IFFO1-201ENST00000336604 AIDAQ96BJ3 306 aa20.6■□□□□ 0.89
IFFO1-201ENST00000336604 OSBPL5Q9H0X9 879 aaPredicted RBP20.6■□□□□ 0.89
IFFO1-201ENST00000336604 SYKP43405 635 aa20.6■□□□□ 0.89
IFFO1-201ENST00000336604 IGDCC4Q8TDY8 1250 aa20.6■□□□□ 0.89
IFFO1-201ENST00000336604 STRBPQ96SI9 672 aaKnown RBP20.6■□□□□ 0.89
IFFO1-201ENST00000336604 TBC1D2BQ9UPU7 963 aa20.6■□□□□ 0.89
IFFO1-201ENST00000336604 C4AP0C0L4 1744 aa20.59■□□□□ 0.89
IFFO1-201ENST00000336604 C4BP0C0L5 1744 aa20.59■□□□□ 0.89
IFFO1-201ENST00000336604 ZBTB43O43298 467 aa20.59■□□□□ 0.89
IFFO1-201ENST00000336604 RANBP6O60518 1105 aaKnown RBP20.59■□□□□ 0.89
IFFO1-201ENST00000336604 CDKL5O76039 1030 aa20.59■□□□□ 0.89
IFFO1-201ENST00000336604 LMOD1P29536 600 aaPredicted RBP20.59■□□□□ 0.89
IFFO1-201ENST00000336604 GSDMDP57764 484 aa20.59■□□□□ 0.89
IFFO1-201ENST00000336604 SHC4Q6S5L8 630 aa20.59■□□□□ 0.89
IFFO1-201ENST00000336604 TMC6Q7Z403 805 aa20.59■□□□□ 0.89
IFFO1-201ENST00000336604 CYP19A1P11511 503 aaPredicted RBP20.59■□□□□ 0.89
IFFO1-201ENST00000336604 NTRK3Q16288 839 aa20.59■□□□□ 0.89
IFFO1-201ENST00000336604 CLIC6Q96NY7 704 aa20.59■□□□□ 0.89
IFFO1-201ENST00000336604 LY9Q9HBG7 655 aa20.59■□□□□ 0.89
IFFO1-201ENST00000336604 OGFRQ9NZT2 677 aa20.59■□□□□ 0.89
IFFO1-201ENST00000336604 MYO5AQ9Y4I1 1855 aaKnown RBP20.58■□□□□ 0.89
IFFO1-201ENST00000336604 ARID4AP29374 1257 aaPredicted RBP20.58■□□□□ 0.89
IFFO1-201ENST00000336604 PTPAQ15257 358 aa20.58■□□□□ 0.89
IFFO1-201ENST00000336604 ARMCX5Q6P1M9 558 aa20.58■□□□□ 0.89
IFFO1-201ENST00000336604 FEZ1Q99689 392 aa20.58■□□□□ 0.89
IFFO1-201ENST00000336604 EPB41L4AQ9HCS5 686 aaPredicted RBP20.58■□□□□ 0.89
IFFO1-201ENST00000336604 FAM217BQ9NTX9 383 aaPredicted RBP20.58■□□□□ 0.89
IFFO1-201ENST00000336604 ATP1A3P13637 1013 aa20.58■□□□□ 0.88
IFFO1-201ENST00000336604 CTDSPL2Q05D32 466 aa20.58■□□□□ 0.88
IFFO1-201ENST00000336604 TMEM67Q5HYA8 995 aa20.58■□□□□ 0.88
IFFO1-201ENST00000336604 BBXQ8WY36 941 aaPredicted RBP20.58■□□□□ 0.88
IFFO1-201ENST00000336604 IMPACTQ9P2X3 320 aa20.58■□□□□ 0.88
IFFO1-201ENST00000336604 UBN2Q6ZU65 1347 aa20.58■□□□□ 0.88
IFFO1-201ENST00000336604 PDE8AO60658 829 aa20.57■□□□□ 0.88
IFFO1-201ENST00000336604 IARSP41252 1262 aaKnown RBP20.57■□□□□ 0.88
IFFO1-201ENST00000336604 CPLX2Q6PUV4 134 aaKnown RBP20.57■□□□□ 0.88
IFFO1-201ENST00000336604 SYTL4Q96C24 671 aaPredicted RBP20.57■□□□□ 0.88
IFFO1-201ENST00000336604 MAP3K14Q99558 947 aa20.57■□□□□ 0.88
IFFO1-201ENST00000336604 XIRP1Q702N8 1843 aaKnown RBP20.57■□□□□ 0.88
IFFO1-201ENST00000336604 GOLGA8AA7E2F4 631 aa20.57■□□□□ 0.88
IFFO1-201ENST00000336604 PNOCQ13519 176 aa20.57■□□□□ 0.88
IFFO1-201ENST00000336604 PUM3Q15397 648 aaKnown RBP20.57■□□□□ 0.88
IFFO1-201ENST00000336604 TMEM87BQ96K49 555 aa20.57■□□□□ 0.88
IFFO1-201ENST00000336604 ZSWIM5Q9P217 1185 aa20.57■□□□□ 0.88
IFFO1-201ENST00000336604 HPSEQ9Y251 543 aa20.57■□□□□ 0.88
IFFO1-201ENST00000336604 MAGEB6Q8N7X4 407 aa20.56■□□□□ 0.88
IFFO1-201ENST00000336604 HSD3B7Q9H2F3 369 aa20.56■□□□□ 0.88
IFFO1-201ENST00000336604 TACC3Q9Y6A5 838 aa20.56■□□□□ 0.88
IFFO1-201ENST00000336604 MBD4O95243 580 aa20.56■□□□□ 0.88
IFFO1-201ENST00000336604 SYCP1Q15431 976 aa20.56■□□□□ 0.88
IFFO1-201ENST00000336604 E4F1Q66K89 784 aaPredicted RBP20.56■□□□□ 0.88
IFFO1-201ENST00000336604 KAT6BQ8WYB5 2073 aa20.56■□□□□ 0.88
IFFO1-201ENST00000336604 PPP6R2O75170 966 aa20.55■□□□□ 0.88
IFFO1-201ENST00000336604 RASGRF1Q13972 1273 aa20.55■□□□□ 0.88
IFFO1-201ENST00000336604 IFNL3Q8IZI9 196 aa20.55■□□□□ 0.88
IFFO1-201ENST00000336604 SPATA5Q8NB90 893 aa20.55■□□□□ 0.88
IFFO1-201ENST00000336604 LPIN2Q92539 896 aa20.55■□□□□ 0.88
IFFO1-201ENST00000336604 SLC26A6Q9BXS9 759 aa20.55■□□□□ 0.88
IFFO1-201ENST00000336604 NAPBQ9H115 298 aa20.55■□□□□ 0.88
IFFO1-201ENST00000336604 ARMT1Q9H993 441 aa20.55■□□□□ 0.88
IFFO1-201ENST00000336604 BTG4Q9NY30 223 aa20.55■□□□□ 0.88
IFFO1-201ENST00000336604 ZNF215Q9UL58 517 aaPredicted RBP20.55■□□□□ 0.88
IFFO1-201ENST00000336604 UQCRFS1P1P0C7P4 283 aa20.55■□□□□ 0.88
IFFO1-201ENST00000336604 SFPQP23246 707 aaKnown RBP eCLIP20.55■□□□□ 0.88
IFFO1-201ENST00000336604 TPM4P67936 248 aa20.55■□□□□ 0.88
IFFO1-201ENST00000336604 SGMS1Q86VZ5 419 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms