RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 BEND3Q5T5X7 828 aa19.32■□□□□ 0.68
TRAPPC11-201ENST00000334690 GTF3C6Q969F1 213 aa19.32■□□□□ 0.68
TRAPPC11-201ENST00000334690 SCLT1Q96NL6 688 aa19.32■□□□□ 0.68
TRAPPC11-201ENST00000334690 MYO5CQ9NQX4 1742 aa19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 ZNF202O95125 648 aa19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 ZNF569Q5MCW4 686 aa19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 RNF187Q5TA31 235 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 TTC6Q86TZ1 520 aa19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 BBXQ8WY36 941 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 DRC1Q96MC2 740 aa19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 PICALMQ13492 652 aa19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 NEK11Q8NG66 645 aa19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 SMARCC2Q8TAQ2 1214 aa19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 LMBR1Q8WVP7 490 aa19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 GUCA1BQ9UMX6 200 aa19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 SPDYE3A6NKU9 549 aa19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 TOM1O60784 492 aa19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 KDRP35968 1356 aa19.31■□□□□ 0.68
TRAPPC11-201ENST00000334690 JAK2O60674 1132 aa19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 TRMT1LQ7Z2T5 733 aaKnown RBP19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 INCENPQ9NQS7 918 aa19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 F8W031 263 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 HS2ST1Q7LGA3 356 aa19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 ARMT1Q9H993 441 aa19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 ZSWIM6Q9HCJ5 1215 aa19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 FANCCQ00597 558 aa19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 ZHX1Q9UKY1 873 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 PALD1Q9ULE6 856 aa19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 OPA1O60313 960 aa19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 TRIM14Q14142 442 aa19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 ZNF174Q15697 407 aa19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 KRT40Q6A162 431 aa19.3■□□□□ 0.68
TRAPPC11-201ENST00000334690 NEBLO76041 1014 aa19.29■□□□□ 0.68
TRAPPC11-201ENST00000334690 OTUD7BQ6GQQ9 843 aa19.29■□□□□ 0.68
TRAPPC11-201ENST00000334690 TIGD1Q96MW7 591 aa19.29■□□□□ 0.68
TRAPPC11-201ENST00000334690 BTG4Q9NY30 223 aa19.29■□□□□ 0.68
TRAPPC11-201ENST00000334690 ERBB4Q15303 1308 aa19.29■□□□□ 0.68
TRAPPC11-201ENST00000334690 E7EWF7 191 aa19.29■□□□□ 0.68
TRAPPC11-201ENST00000334690 IVLP07476 585 aa19.29■□□□□ 0.68
TRAPPC11-201ENST00000334690 ZNF274Q96GC6 653 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC11-201ENST00000334690 NAP1L4Q99733 375 aaKnown RBP19.29■□□□□ 0.68
TRAPPC11-201ENST00000334690 OGFOD1Q8N543 542 aa19.29■□□□□ 0.68
TRAPPC11-201ENST00000334690 IGSF22Q8N9C0 903 aa19.29■□□□□ 0.68
TRAPPC11-201ENST00000334690 PLCD4Q9BRC7 762 aa19.29■□□□□ 0.68
TRAPPC11-201ENST00000334690 V9GY48 417 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC11-201ENST00000334690 ATP7BP35670 1465 aa19.28■□□□□ 0.68
TRAPPC11-201ENST00000334690 POLR2DO15514 142 aaKnown RBP19.28■□□□□ 0.68
TRAPPC11-201ENST00000334690 NLRP12P59046 1061 aa19.28■□□□□ 0.68
TRAPPC11-201ENST00000334690 SPECC1LQ69YQ0 1117 aa19.28■□□□□ 0.68
TRAPPC11-201ENST00000334690 NDUFB9Q9Y6M9 179 aa19.28■□□□□ 0.68
TRAPPC11-201ENST00000334690 SAMD9LQ8IVG5 1584 aa19.28■□□□□ 0.68
TRAPPC11-201ENST00000334690 PARP1P09874 1014 aaKnown RBP19.28■□□□□ 0.68
TRAPPC11-201ENST00000334690 HIBADHP31937 336 aaKnown RBP19.28■□□□□ 0.68
TRAPPC11-201ENST00000334690 ZAP70P43403 619 aa19.28■□□□□ 0.68
TRAPPC11-201ENST00000334690 MRPL12P52815 198 aaKnown RBP19.28■□□□□ 0.68
TRAPPC11-201ENST00000334690 DNAJC10Q8IXB1 793 aa19.28■□□□□ 0.68
TRAPPC11-201ENST00000334690 DDX12PQ92771 950 aa19.28■□□□□ 0.68
TRAPPC11-201ENST00000334690 LTKP29376 864 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 TCIRG1Q13488 830 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 HDAC9Q9UKV0 1011 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 RGS12O14924 1447 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 FSD2A1L4K1 749 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 ERVV-2B6SEH9 535 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 TUBB2AQ13885 445 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 TRERF1Q96PN7 1200 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 PPP1R9BQ96SB3 815 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 TUBB2BQ9BVA1 445 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 MTMR6Q9Y217 621 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 WDR78Q5VTH9 848 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 CERS3Q8IU89 383 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 CCDC155Q8N6L0 562 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 OGFRQ9NZT2 677 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 MROH5Q6ZUA9 1318 aa19.27■□□□□ 0.68
TRAPPC11-201ENST00000334690 A0A0D9SFI3 127 aa19.27■□□□□ 0.67
TRAPPC11-201ENST00000334690 PTH1RQ03431 593 aa19.27■□□□□ 0.67
TRAPPC11-201ENST00000334690 TBC1D8BQ0IIM8 1120 aa19.26■□□□□ 0.67
TRAPPC11-201ENST00000334690 SV2BQ7L1I2 683 aa19.26■□□□□ 0.67
TRAPPC11-201ENST00000334690 MYRIPQ8NFW9 859 aa19.26■□□□□ 0.67
TRAPPC11-201ENST00000334690 ARHGAP6O43182 974 aa19.26■□□□□ 0.67
TRAPPC11-201ENST00000334690 LETM2Q2VYF4 491 aa19.26■□□□□ 0.67
TRAPPC11-201ENST00000334690 MYSM1Q5VVJ2 828 aa19.26■□□□□ 0.67
TRAPPC11-201ENST00000334690 ADALQ6DHV7 355 aa19.26■□□□□ 0.67
TRAPPC11-201ENST00000334690 EDC3Q96F86 508 aaKnown RBP19.26■□□□□ 0.67
TRAPPC11-201ENST00000334690 ZNF853P0CG23 659 aa19.26■□□□□ 0.67
TRAPPC11-201ENST00000334690 KCNQ3O43525 872 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 VAV2P52735 878 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 EVCP57679 992 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 CCDC122Q5T0U0 273 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 NFE2L3Q9Y4A8 694 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 ZNF532Q9HCE3 1301 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 GIGYF2Q6Y7W6 1299 aaKnown RBP19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 FMNL3Q8IVF7 1028 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 TEX11Q8IYF3 940 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 COPRSQ9NQ92 184 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 PUF60Q9UHX1 559 aaKnown RBP19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 TTF2Q9UNY4 1162 aaKnown RBP19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 RPL13P26373 211 aaKnown RBP19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 TTC38Q5R3I4 469 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 FERMT2Q96AC1 680 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms