RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.2■□□□□ 0.5
TSPO-201ENST00000329563 DAGLAQ9Y4D2 1042 aa18.2■□□□□ 0.5
TSPO-201ENST00000329563 MAST3O60307 1309 aa18.2■□□□□ 0.5
TSPO-201ENST00000329563 A0A1B0GUL7 405 aa18.19■□□□□ 0.5
TSPO-201ENST00000329563 RASGRF1Q13972 1273 aa18.19■□□□□ 0.5
TSPO-201ENST00000329563 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
TSPO-201ENST00000329563 TMOD2Q9NZR1 351 aa18.19■□□□□ 0.5
TSPO-201ENST00000329563 SALL1Q9NSC2 1324 aa18.19■□□□□ 0.5
TSPO-201ENST00000329563 IGF2BP3O00425 579 aaKnown RBP eCLIP18.18■□□□□ 0.5
TSPO-201ENST00000329563 ZBTB22O15209 634 aa18.18■□□□□ 0.5
TSPO-201ENST00000329563 AAMPQ13685 434 aa18.18■□□□□ 0.5
TSPO-201ENST00000329563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.18■□□□□ 0.51e-7■□□□□ 9.9
TSPO-201ENST00000329563 HOOK2Q96ED9 719 aa18.18■□□□□ 0.5
TSPO-201ENST00000329563 XAGE2Q96GT9 111 aa18.18■□□□□ 0.5
TSPO-201ENST00000329563 ELP3Q9H9T3 547 aa18.18■□□□□ 0.5
TSPO-201ENST00000329563 SEMA3EO15041 775 aa18.17■□□□□ 0.5
TSPO-201ENST00000329563 MVPQ14764 893 aaKnown RBP18.17■□□□□ 0.5
TSPO-201ENST00000329563 CDC42EP5Q6NZY7 148 aa18.17■□□□□ 0.5
TSPO-201ENST00000329563 PANK1Q8TE04 598 aa18.17■□□□□ 0.5
TSPO-201ENST00000329563 ERO1AQ96HE7 468 aa18.17■□□□□ 0.5
TSPO-201ENST00000329563 C1orf115Q9H7X2 142 aa18.17■□□□□ 0.5
TSPO-201ENST00000329563 DENND2AQ9ULE3 1009 aa18.17■□□□□ 0.5
TSPO-201ENST00000329563 DDX19BQ9UMR2 479 aa18.17■□□□□ 0.5
TSPO-201ENST00000329563 WDHD1O75717 1129 aaPredicted RBP18.16■□□□□ 0.5
TSPO-201ENST00000329563 NFIAQ12857 509 aa18.16■□□□□ 0.5
TSPO-201ENST00000329563 VGLL4Q14135 290 aa18.16■□□□□ 0.5
TSPO-201ENST00000329563 POLA2Q14181 598 aa18.16■□□□□ 0.5
TSPO-201ENST00000329563 C20orf194Q5TEA3 1177 aa18.16■□□□□ 0.5
TSPO-201ENST00000329563 FKBP1CQ5VVH2 108 aa18.16■□□□□ 0.5
TSPO-201ENST00000329563 FAM83AQ86UY5 434 aa18.16■□□□□ 0.5
TSPO-201ENST00000329563 PTPN18Q99952 460 aa18.16■□□□□ 0.5
TSPO-201ENST00000329563 GNL3LQ9NVN8 582 aaKnown RBP18.16■□□□□ 0.5
TSPO-201ENST00000329563 CSADQ9Y600 493 aa18.16■□□□□ 0.5
TSPO-201ENST00000329563 LDHBP07195 334 aaKnown RBP18.15■□□□□ 0.5
TSPO-201ENST00000329563 PI16Q6UXB8 463 aa18.15■□□□□ 0.5
TSPO-201ENST00000329563 ITPRIPQ8IWB1 547 aa18.15■□□□□ 0.5
TSPO-201ENST00000329563 ZNF384Q8TF68 577 aa18.15■□□□□ 0.5
TSPO-201ENST00000329563 OPTNQ96CV9 577 aa18.15■□□□□ 0.5
TSPO-201ENST00000329563 COG6Q9Y2V7 657 aa18.15■□□□□ 0.5
TSPO-201ENST00000329563 RPAP1Q9BWH6 1393 aaPredicted RBP18.15■□□□□ 0.5
TSPO-201ENST00000329563 MYH2Q9UKX2 1941 aa18.14■□□□□ 0.49
TSPO-201ENST00000329563 ZBTB7BO15156 539 aaPredicted RBP18.14■□□□□ 0.49
TSPO-201ENST00000329563 ARHGEF6Q15052 776 aa18.14■□□□□ 0.49
TSPO-201ENST00000329563 ZFPM1Q8IX07 1006 aa18.14■□□□□ 0.49
TSPO-201ENST00000329563 MS4A4AQ96JQ5 239 aa18.14■□□□□ 0.49
TSPO-201ENST00000329563 FAM198AQ9UFP1 575 aa18.14■□□□□ 0.49
TSPO-201ENST00000329563 TRIM17Q9Y577 477 aa18.14■□□□□ 0.49
TSPO-201ENST00000329563 SNCAIPQ9Y6H5 919 aa18.14■□□□□ 0.49
TSPO-201ENST00000329563 PDS5AQ29RF7 1337 aaKnown RBP18.14■□□□□ 0.49
TSPO-201ENST00000329563 KIAA0100Q14667 2235 aaKnown RBP18.14■□□□□ 0.49
TSPO-201ENST00000329563 AK9Q5TCS8 1911 aa18.13■□□□□ 0.49
TSPO-201ENST00000329563 TESPA1A2RU30 521 aaPredicted RBP18.13■□□□□ 0.49
TSPO-201ENST00000329563 SLC34A2O95436 690 aa18.13■□□□□ 0.49
TSPO-201ENST00000329563 MAP3K9P80192 1104 aa18.13■□□□□ 0.49
TSPO-201ENST00000329563 SSH3Q8TE77 659 aa18.13■□□□□ 0.49
TSPO-201ENST00000329563 NEUROD6Q96NK8 337 aa18.13■□□□□ 0.49
TSPO-201ENST00000329563 HMG20BQ9P0W2 317 aa18.13■□□□□ 0.49
TSPO-201ENST00000329563 AKAP2Q9Y2D5 859 aa18.13■□□□□ 0.49
TSPO-201ENST00000329563 GAKO14976 1311 aa18.13■□□□□ 0.49
TSPO-201ENST00000329563 RFX7Q2KHR2 1363 aa18.13■□□□□ 0.49
TSPO-201ENST00000329563 GTF2A2P52657 109 aa18.12■□□□□ 0.49
TSPO-201ENST00000329563 ATP8B2P98198 1209 aa18.12■□□□□ 0.49
TSPO-201ENST00000329563 TCP10Q12799 353 aa18.12■□□□□ 0.49
TSPO-201ENST00000329563 CRHR2Q13324 411 aa18.12■□□□□ 0.49
TSPO-201ENST00000329563 MIGA2Q7L4E1 593 aa18.12■□□□□ 0.49
TSPO-201ENST00000329563 FAM151AQ8WW52 585 aa18.12■□□□□ 0.49
TSPO-201ENST00000329563 ZKSCAN4Q969J2 545 aaPredicted RBP18.12■□□□□ 0.49
TSPO-201ENST00000329563 CRBNQ96SW2 442 aa18.12■□□□□ 0.49
TSPO-201ENST00000329563 IRX6P78412 446 aaPredicted RBP18.11■□□□□ 0.49
TSPO-201ENST00000329563 DCAF15Q66K64 600 aa18.11■□□□□ 0.49
TSPO-201ENST00000329563 OTOP1Q7RTM1 612 aa18.11■□□□□ 0.49
TSPO-201ENST00000329563 BRI3BPQ8WY22 251 aa18.11■□□□□ 0.49
TSPO-201ENST00000329563 OTUD5Q96G74 571 aa18.11■□□□□ 0.49
TSPO-201ENST00000329563 WRNIP1Q96S55 665 aa18.11■□□□□ 0.49
TSPO-201ENST00000329563 USP40Q9NVE5 1235 aa18.11■□□□□ 0.49
TSPO-201ENST00000329563 ABCF2Q9UG63 623 aa18.11■□□□□ 0.49
TSPO-201ENST00000329563 DOCK2Q92608 1830 aa18.1■□□□□ 0.49
TSPO-201ENST00000329563 ATRNL1Q5VV63 1379 aa18.1■□□□□ 0.49
TSPO-201ENST00000329563 SPDYE5A6NIY4 337 aa18.1■□□□□ 0.49
TSPO-201ENST00000329563 ARID4AP29374 1257 aaPredicted RBP18.1■□□□□ 0.49
TSPO-201ENST00000329563 MCAMP43121 646 aa18.1■□□□□ 0.49
TSPO-201ENST00000329563 CAP1Q01518 475 aa18.1■□□□□ 0.49
TSPO-201ENST00000329563 SP3Q02447 781 aa18.1■□□□□ 0.49
TSPO-201ENST00000329563 G3BP1Q13283 466 aaKnown RBP eCLIP18.1■□□□□ 0.49
TSPO-201ENST00000329563 PRPF38BQ5VTL8 546 aaKnown RBP18.1■□□□□ 0.49
TSPO-201ENST00000329563 TBC1D9Q6ZT07 1266 aa18.1■□□□□ 0.49
TSPO-201ENST00000329563 ZFYVE28Q9HCC9 887 aa18.1■□□□□ 0.49
TSPO-201ENST00000329563 CCL15-CCL14A0A0B4J2E2 113 aa18.09■□□□□ 0.49
TSPO-201ENST00000329563 SLURP2P0DP57 97 aa18.09■□□□□ 0.49
TSPO-201ENST00000329563 INPP5BP32019 993 aa18.09■□□□□ 0.49
TSPO-201ENST00000329563 MECOMQ03112 1051 aa18.09■□□□□ 0.49
TSPO-201ENST00000329563 CCL15Q16663 113 aa18.09■□□□□ 0.49
TSPO-201ENST00000329563 SH3BP5LQ7L8J4 393 aa18.09■□□□□ 0.49
TSPO-201ENST00000329563 ZGPATQ8N5A5 531 aaKnown RBP18.09■□□□□ 0.49
TSPO-201ENST00000329563 SPATA5Q8NB90 893 aa18.09■□□□□ 0.49
TSPO-201ENST00000329563 EXOC6Q8TAG9 804 aa18.09■□□□□ 0.49
TSPO-201ENST00000329563 EFCC1Q9HA90 598 aa18.09■□□□□ 0.49
TSPO-201ENST00000329563 HTTP42858 3142 aa18.08■□□□□ 0.49
TSPO-201ENST00000329563 TAF1CQ15572 869 aaPredicted RBP18.08■□□□□ 0.48
TSPO-201ENST00000329563 TNNI3KQ59H18 835 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms