RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ZSWIM4Q9H7M6 989 aa14.85□□□□□ -0.03
HMGCS1-201ENST00000325110 A0A1W2PQ27 194 aa14.85□□□□□ -0.03
HMGCS1-201ENST00000325110 A0A1W2PQ64 194 aa14.85□□□□□ -0.03
HMGCS1-201ENST00000325110 A0A1W2PQD8 194 aa14.85□□□□□ -0.03
HMGCS1-201ENST00000325110 BTBD18B2RXH4 712 aa14.85□□□□□ -0.03
HMGCS1-201ENST00000325110 OVOS2A0A0G2JMS6 1433 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 RFX7Q2KHR2 1363 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 CIAO1O76071 339 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 PDE6AP16499 860 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 MYL5Q02045 173 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 UBXN4Q92575 508 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 FANCLQ9NW38 375 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 MROH7-TTC4A0A0A0MT08 1334 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 AFMP43652 599 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 MAP3K12Q12852 859 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 MFSD6Q6ZSS7 791 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 GRAMD1CQ8IYS0 662 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 ANKRD7Q92527 254 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 KCNH3Q9ULD8 1083 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 CTIFO43310 598 aaKnown RBP14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 ZSCAN20P17040 1043 aaPredicted RBP14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 CMA1P23946 247 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 STX17P56962 302 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 ARMCX5Q6P1M9 558 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 UBAC1Q9BSL1 405 aa14.84□□□□□ -0.03
HMGCS1-201ENST00000325110 JCADQ9P266 1359 aa14.83□□□□□ -0.03
HMGCS1-201ENST00000325110 ERVV-2B6SEH9 535 aa14.83□□□□□ -0.03
HMGCS1-201ENST00000325110 FOXN1O15353 648 aa14.83□□□□□ -0.03
HMGCS1-201ENST00000325110 PRKAB2O43741 272 aa14.83□□□□□ -0.03
HMGCS1-201ENST00000325110 PPP1R13BQ96KQ4 1090 aa14.83□□□□□ -0.03
HMGCS1-201ENST00000325110 HOOK1Q9UJC3 728 aaKnown RBP14.83□□□□□ -0.03
HMGCS1-201ENST00000325110 CBFA2T2O43439 604 aa14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 SLC39A14Q15043 492 aa14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 TTF1Q15361 905 aaPredicted RBP14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 ARHGAP29Q52LW3 1261 aa14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 DIS3L2Q8IYB7 885 aaKnown RBP14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 ZBTB38Q8NAP3 1195 aaPredicted RBP14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 ZNF397Q8NF99 534 aaPredicted RBP14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 DPF2Q92785 391 aa14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 OGFRQ9NZT2 677 aa14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 RAI14Q9P0K7 980 aa14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 PCDHA5Q9Y5H7 936 aa14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 SLC4A4Q9Y6R1 1079 aa14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 POLR2DO15514 142 aaKnown RBP14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 AGXT2Q9BYV1 514 aa14.83□□□□□ -0.04
HMGCS1-201ENST00000325110 TMEM232C9JQI7 657 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 PCCAP05165 728 aaPredicted RBP14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 ADD2P35612 726 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 NACAP1Q9BZK3 213 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 NEDD4P46934 1319 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 SALL1Q9NSC2 1324 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 GTF2E1P29083 439 aaPredicted RBP14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 GNG11P61952 73 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 DMTNQ08495 405 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 WTAPQ15007 396 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 RTN1Q16799 776 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 LONRF3Q496Y0 759 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 TEX35Q5T0J7 233 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 FBXO38Q6PIJ6 1188 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 RASSF8Q8NHQ8 419 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 ERO1AQ96HE7 468 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 ZBTB1Q9Y2K1 713 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 ZMYM6O95789 1325 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 WDR17Q8IZU2 1322 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 KIF2AO00139 706 aaPredicted RBP14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 PRDM1O75626 825 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 KARSQ15046 597 aaKnown RBP14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 E4F1Q66K89 784 aaPredicted RBP14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 TTLL11Q8NHH1 800 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 FEZ1Q99689 392 aa14.82□□□□□ -0.04
HMGCS1-201ENST00000325110 CTSWP56202 376 aa14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 NR5A1Q13285 461 aa14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 NBPF11Q86T75 865 aa14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 DZIP3Q86Y13 1208 aaKnown RBP14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 NKX2-3Q8TAU0 364 aa14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 STAMQ92783 540 aa14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 POLR3GO15318 223 aaPredicted RBP14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 RANBP6O60518 1105 aaKnown RBP14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 ADKP55263 362 aaKnown RBP14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 KMT5BQ4FZB7 885 aa14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 SHC4Q6S5L8 630 aa14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 KRT222Q8N1A0 295 aa14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 KLHL34Q8N239 644 aa14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 DHX58Q96C10 678 aa14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 ISCA1Q9BUE6 129 aa14.81□□□□□ -0.04
HMGCS1-201ENST00000325110 SLC5A1P13866 664 aa14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 PIGBQ92521 554 aa14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 CABP5Q9NP86 173 aa14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 ZSWIM5Q9P217 1185 aa14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 LMO7Q8WWI1 1683 aa14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 SPATA31A3Q5VYP0 1347 aa14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 SH2B2O14492 632 aaPredicted RBP14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 FOXP2O15409 715 aa14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 COBLO75128 1261 aa14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 RBM6P78332 1123 aaKnown RBP14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 AXDND1Q5T1B0 1012 aaPredicted RBP14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 KRI1Q8N9T8 703 aaKnown RBP14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 SMARCE1Q969G3 411 aa14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 NFE2L3Q9Y4A8 694 aa14.8□□□□□ -0.04
HMGCS1-201ENST00000325110 PDE8BO95263 885 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms