RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 DOK7Q18PE1 504 aa12.72□□□□□ -0.37
CASP3-201ENST00000308394 TTLL5Q6EMB2 1281 aa12.72□□□□□ -0.37
CASP3-201ENST00000308394 ADGRA1Q86SQ6 560 aa12.72□□□□□ -0.37
CASP3-201ENST00000308394 DZIP1Q86YF9 867 aaKnown RBP12.72□□□□□ -0.37
CASP3-201ENST00000308394 FBXW7Q969H0 707 aa12.72□□□□□ -0.37
CASP3-201ENST00000308394 CTNNA3Q9UI47 895 aa12.72□□□□□ -0.37
CASP3-201ENST00000308394 LDHBP07195 334 aaKnown RBP12.71□□□□□ -0.37
CASP3-201ENST00000308394 NSUN4Q96CB9 384 aaKnown RBP12.71□□□□□ -0.37
CASP3-201ENST00000308394 COA1Q9GZY4 146 aa12.71□□□□□ -0.37
CASP3-201ENST00000308394 SLKQ9H2G2 1235 aaPredicted RBP12.71□□□□□ -0.37
CASP3-201ENST00000308394 CYP46A1Q9Y6A2 500 aa12.71□□□□□ -0.37
CASP3-201ENST00000308394 MAGEB6P1A0A0J9YX57 407 aa12.71□□□□□ -0.38
CASP3-201ENST00000308394 FOXP2O15409 715 aa12.71□□□□□ -0.38
CASP3-201ENST00000308394 KRT32Q14532 448 aa12.71□□□□□ -0.38
CASP3-201ENST00000308394 EGFL6Q8IUX8 553 aa12.71□□□□□ -0.38
CASP3-201ENST00000308394 LCORLQ8N3X6 602 aa12.71□□□□□ -0.38
CASP3-201ENST00000308394 SLX4Q8IY92 1834 aa12.71□□□□□ -0.38
CASP3-201ENST00000308394 DOCK2Q92608 1830 aa12.71□□□□□ -0.38
CASP3-201ENST00000308394 KCNA3P22001 575 aa12.7□□□□□ -0.38
CASP3-201ENST00000308394 HAND2P61296 217 aa12.7□□□□□ -0.38
CASP3-201ENST00000308394 GTF2IP78347 998 aa12.7□□□□□ -0.38
CASP3-201ENST00000308394 IMMTQ16891 758 aaKnown RBP12.7□□□□□ -0.38
CASP3-201ENST00000308394 C7orf43Q8WVR3 580 aa12.7□□□□□ -0.38
CASP3-201ENST00000308394 SLC4A4Q9Y6R1 1079 aa12.7□□□□□ -0.38
CASP3-201ENST00000308394 MYH13Q9UKX3 1938 aa12.7□□□□□ -0.38
CASP3-201ENST00000308394 SALL1Q9NSC2 1324 aa12.7□□□□□ -0.38
CASP3-201ENST00000308394 TSGA10IPQ3SY00 556 aa12.7□□□□□ -0.38
CASP3-201ENST00000308394 RUFY3Q7L099 469 aa12.7□□□□□ -0.38
CASP3-201ENST00000308394 ZNF384Q8TF68 577 aa12.7□□□□□ -0.38
CASP3-201ENST00000308394 TM6SF1Q9BZW5 370 aa12.7□□□□□ -0.38
CASP3-201ENST00000308394 ZSWIM6Q9HCJ5 1215 aa12.7□□□□□ -0.38
CASP3-201ENST00000308394 FOXD4L1Q9NU39 408 aa12.7□□□□□ -0.38
CASP3-201ENST00000308394 LTBP1Q14766 1721 aa12.69□□□□□ -0.38
CASP3-201ENST00000308394 TGFB2P61812 414 aa12.69□□□□□ -0.38
CASP3-201ENST00000308394 MFSD14BQ5SR56 506 aa12.69□□□□□ -0.38
CASP3-201ENST00000308394 BLOC1S2Q6QNY1 142 aa12.69□□□□□ -0.38
CASP3-201ENST00000308394 NEK1Q96PY6 1258 aa12.69□□□□□ -0.38
CASP3-201ENST00000308394 DBNDD1Q9H9R9 158 aa12.69□□□□□ -0.38
CASP3-201ENST00000308394 PDRG1Q9NUG6 133 aa12.69□□□□□ -0.38
CASP3-201ENST00000308394 ZNF213O14771 459 aa12.69□□□□□ -0.38
CASP3-201ENST00000308394 PRKAB2O43741 272 aa12.69□□□□□ -0.38
CASP3-201ENST00000308394 GNAT2P19087 354 aa12.69□□□□□ -0.38
CASP3-201ENST00000308394 MCM2P49736 904 aa12.69□□□□□ -0.38
CASP3-201ENST00000308394 DYNLL1P63167 89 aaKnown RBP12.69□□□□□ -0.38
CASP3-201ENST00000308394 SEMA3FQ13275 785 aa12.69□□□□□ -0.38
CASP3-201ENST00000308394 AATFQ9NY61 560 aaKnown RBP eCLIP12.69□□□□□ -0.38
CASP3-201ENST00000308394 DUOX1Q9NRD9 1551 aa12.69□□□□□ -0.38
CASP3-201ENST00000308394 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
CASP3-201ENST00000308394 GRIK5Q16478 980 aa12.68□□□□□ -0.38
CASP3-201ENST00000308394 IFNL3Q8IZI9 196 aa12.68□□□□□ -0.38
CASP3-201ENST00000308394 NAPBQ9H115 298 aa12.68□□□□□ -0.38
CASP3-201ENST00000308394 PIM2Q9P1W9 311 aa12.68□□□□□ -0.38
CASP3-201ENST00000308394 AK2P54819 239 aa12.68□□□□□ -0.38
CASP3-201ENST00000308394 FAM43AQ8N2R8 423 aa12.68□□□□□ -0.38
CASP3-201ENST00000308394 TBC1D22AQ8WUA7 517 aa12.68□□□□□ -0.38
CASP3-201ENST00000308394 SDR42E1Q8WUS8 393 aa12.68□□□□□ -0.38
CASP3-201ENST00000308394 LARP6Q9BRS8 491 aaKnown RBP12.68□□□□□ -0.38
CASP3-201ENST00000308394 NACAP1Q9BZK3 213 aa12.68□□□□□ -0.38
CASP3-201ENST00000308394 RPAP1Q9BWH6 1393 aaPredicted RBP12.68□□□□□ -0.38
CASP3-201ENST00000308394 GSG1L2A8MUP6 293 aa12.67□□□□□ -0.38
CASP3-201ENST00000308394 E7EWF7 191 aa12.67□□□□□ -0.38
CASP3-201ENST00000308394 TDO2P48775 406 aa12.67□□□□□ -0.38
CASP3-201ENST00000308394 AOC3Q16853 763 aa12.67□□□□□ -0.38
CASP3-201ENST00000308394 CCDC93Q567U6 631 aa12.67□□□□□ -0.38
CASP3-201ENST00000308394 TCEANC2Q96MN5 208 aa12.67□□□□□ -0.38
CASP3-201ENST00000308394 TTC14Q96N46 770 aa12.67□□□□□ -0.38
CASP3-201ENST00000308394 RIOK1Q9BRS2 568 aaKnown RBP12.67□□□□□ -0.38
CASP3-201ENST00000308394 RTFDC1Q9BY42 306 aaPredicted RBP12.67□□□□□ -0.38
CASP3-201ENST00000308394 GSTO1P78417 241 aa12.67□□□□□ -0.38
CASP3-201ENST00000308394 COL9A3Q14050 684 aaPredicted RBP12.67□□□□□ -0.38
CASP3-201ENST00000308394 DIXDC1Q155Q3 683 aa12.67□□□□□ -0.38
CASP3-201ENST00000308394 STOX1Q6ZVD7 989 aa12.67□□□□□ -0.38
CASP3-201ENST00000308394 SUPT20HQ8NEM7 779 aa12.67□□□□□ -0.38
CASP3-201ENST00000308394 IRF6O14896 467 aa12.66□□□□□ -0.38
CASP3-201ENST00000308394 RPS6KB1P23443 525 aa12.66□□□□□ -0.38
CASP3-201ENST00000308394 PODNQ7Z5L7 613 aa12.66□□□□□ -0.38
CASP3-201ENST00000308394 NBPF11Q86T75 865 aa12.66□□□□□ -0.38
CASP3-201ENST00000308394 RTKN2Q8IZC4 609 aa12.66□□□□□ -0.38
CASP3-201ENST00000308394 TMX3Q96JJ7 454 aa12.66□□□□□ -0.38
CASP3-201ENST00000308394 EPB41L4AQ9HCS5 686 aaPredicted RBP12.66□□□□□ -0.38
CASP3-201ENST00000308394 F8W031 263 aaPredicted RBP12.66□□□□□ -0.38
CASP3-201ENST00000308394 NBPF20Q3BBV1 942 aa12.66□□□□□ -0.38
CASP3-201ENST00000308394 SGIP1Q9BQI5 828 aa12.66□□□□□ -0.38
CASP3-201ENST00000308394 NOL10Q9BSC4 688 aaKnown RBP12.66□□□□□ -0.38
CASP3-201ENST00000308394 FAM205AQ6ZU69 1335 aa12.66□□□□□ -0.38
CASP3-201ENST00000308394 TTC36A6NLP5 189 aa12.65□□□□□ -0.38
CASP3-201ENST00000308394 PPIP5K2O43314 1243 aa12.65□□□□□ -0.38
CASP3-201ENST00000308394 ECE2O60344 883 aa12.65□□□□□ -0.38
CASP3-201ENST00000308394 LDHCP07864 332 aa12.65□□□□□ -0.38
CASP3-201ENST00000308394 DALRD3Q5D0E6 543 aaKnown RBP12.65□□□□□ -0.38
CASP3-201ENST00000308394 KCNQ5Q9NR82 932 aa12.65□□□□□ -0.38
CASP3-201ENST00000308394 PTGER2P43116 358 aa12.65□□□□□ -0.38
CASP3-201ENST00000308394 ALX1Q15699 326 aa12.65□□□□□ -0.38
CASP3-201ENST00000308394 MXD3Q9BW11 206 aa12.65□□□□□ -0.38
CASP3-201ENST00000308394 BAG3O95817 575 aa12.65□□□□□ -0.39
CASP3-201ENST00000308394 KIAA2012Q0VF49 1180 aa12.65□□□□□ -0.39
CASP3-201ENST00000308394 CRNKL1Q9BZJ0 848 aaKnown RBP12.65□□□□□ -0.39
CASP3-201ENST00000308394 LIMCH1Q9UPQ0 1083 aa12.65□□□□□ -0.39
CASP3-201ENST00000308394 CD2APQ9Y5K6 639 aa12.65□□□□□ -0.39
CASP3-201ENST00000308394 TRDNQ13061 729 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms