RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 GORABQ5T7V8 394 aa22.54■■□□□ 1.2
TMEM88-201ENST00000301599 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.54■■□□□ 1.2
TMEM88-201ENST00000301599 FAM151AQ8WW52 585 aa22.54■■□□□ 1.2
TMEM88-201ENST00000301599 OPTNQ96CV9 577 aa22.54■■□□□ 1.2
TMEM88-201ENST00000301599 USP40Q9NVE5 1235 aa22.54■■□□□ 1.2
TMEM88-201ENST00000301599 PDS5AQ29RF7 1337 aaKnown RBP22.54■■□□□ 1.2
TMEM88-201ENST00000301599 TESPA1A2RU30 521 aaPredicted RBP22.53■■□□□ 1.2
TMEM88-201ENST00000301599 FKTNO75072 461 aa22.53■■□□□ 1.2
TMEM88-201ENST00000301599 RASGRF1Q13972 1273 aa22.53■■□□□ 1.2
TMEM88-201ENST00000301599 PKN2Q16513 984 aaKnown RBP22.53■■□□□ 1.2
TMEM88-201ENST00000301599 DCAF15Q66K64 600 aa22.53■■□□□ 1.2
TMEM88-201ENST00000301599 SLF2Q8IX21 1173 aa22.53■■□□□ 1.2
TMEM88-201ENST00000301599 ABCF2Q9UG63 623 aa22.53■■□□□ 1.2
TMEM88-201ENST00000301599 VGLL4Q14135 290 aa22.52■■□□□ 1.2
TMEM88-201ENST00000301599 R3HDMLQ9H3Y0 253 aa22.52■■□□□ 1.2
TMEM88-201ENST00000301599 IGF2BP3O00425 579 aaKnown RBP eCLIP22.51■■□□□ 1.19
TMEM88-201ENST00000301599 ZBTB7BO15156 539 aaPredicted RBP22.51■■□□□ 1.19
TMEM88-201ENST00000301599 POLA2Q14181 598 aa22.51■■□□□ 1.19
TMEM88-201ENST00000301599 ITPRIPQ8IWB1 547 aa22.51■■□□□ 1.19
TMEM88-201ENST00000301599 SSH3Q8TE77 659 aa22.51■■□□□ 1.19
TMEM88-201ENST00000301599 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.51■■□□□ 1.19
TMEM88-201ENST00000301599 GTF2A2P52657 109 aa22.5■■□□□ 1.19
TMEM88-201ENST00000301599 TCP10Q12799 353 aa22.5■■□□□ 1.19
TMEM88-201ENST00000301599 DZIP1Q86YF9 867 aaKnown RBP22.5■■□□□ 1.19
TMEM88-201ENST00000301599 FAM163AQ96GL9 167 aaPredicted RBP22.5■■□□□ 1.19
TMEM88-201ENST00000301599 MS4A4AQ96JQ5 239 aa22.5■■□□□ 1.19
TMEM88-201ENST00000301599 WRNIP1Q96S55 665 aa22.5■■□□□ 1.19
TMEM88-201ENST00000301599 ZNF341Q9BYN7 854 aa22.5■■□□□ 1.19
TMEM88-201ENST00000301599 RGS19P49795 217 aa22.49■■□□□ 1.19
TMEM88-201ENST00000301599 ERICH6Q7L0X2 663 aa22.49■■□□□ 1.19
TMEM88-201ENST00000301599 MIGA2Q7L4E1 593 aa22.49■■□□□ 1.19
TMEM88-201ENST00000301599 ERO1BQ86YB8 467 aa22.49■■□□□ 1.19
TMEM88-201ENST00000301599 PTPN18Q99952 460 aa22.49■■□□□ 1.19
TMEM88-201ENST00000301599 GPR108Q9NPR9 543 aa22.49■■□□□ 1.19
TMEM88-201ENST00000301599 RPAP1Q9BWH6 1393 aaPredicted RBP22.49■■□□□ 1.19
TMEM88-201ENST00000301599 RLBP1P12271 317 aa22.48■■□□□ 1.19
TMEM88-201ENST00000301599 NFIAQ12857 509 aa22.48■■□□□ 1.19
TMEM88-201ENST00000301599 OS9Q13438 667 aaPredicted RBP22.48■■□□□ 1.19
TMEM88-201ENST00000301599 SPATA5Q8NB90 893 aa22.48■■□□□ 1.19
TMEM88-201ENST00000301599 CNKSR2Q8WXI2 1034 aa22.48■■□□□ 1.19
TMEM88-201ENST00000301599 ZKSCAN4Q969J2 545 aaPredicted RBP22.48■■□□□ 1.19
TMEM88-201ENST00000301599 OTUD5Q96G74 571 aa22.48■■□□□ 1.19
TMEM88-201ENST00000301599 HMG20BQ9P0W2 317 aa22.48■■□□□ 1.19
TMEM88-201ENST00000301599 FAM198AQ9UFP1 575 aa22.48■■□□□ 1.19
TMEM88-201ENST00000301599 MYH13Q9UKX3 1938 aa22.48■■□□□ 1.19
TMEM88-201ENST00000301599 SPDYE5A6NIY4 337 aa22.47■■□□□ 1.19
TMEM88-201ENST00000301599 SURF6O75683 361 aaKnown RBP22.47■■□□□ 1.19
TMEM88-201ENST00000301599 UQCRFS1P1P0C7P4 283 aa22.47■■□□□ 1.19
TMEM88-201ENST00000301599 IDI2Q9BXS1 227 aa22.47■■□□□ 1.19
TMEM88-201ENST00000301599 GAKO14976 1311 aa22.47■■□□□ 1.19
TMEM88-201ENST00000301599 CCL15-CCL14A0A0B4J2E2 113 aa22.46■■□□□ 1.19
TMEM88-201ENST00000301599 ENTPD3O75355 529 aa22.46■■□□□ 1.19
TMEM88-201ENST00000301599 LDHCP07864 332 aa22.46■■□□□ 1.19
TMEM88-201ENST00000301599 MS4A1P11836 297 aa22.46■■□□□ 1.19
TMEM88-201ENST00000301599 ARID4AP29374 1257 aaPredicted RBP22.46■■□□□ 1.19
TMEM88-201ENST00000301599 CCL15Q16663 113 aa22.46■■□□□ 1.19
TMEM88-201ENST00000301599 C1orf115Q9H7X2 142 aa22.46■■□□□ 1.19
TMEM88-201ENST00000301599 SNCAIPQ9Y6H5 919 aa22.46■■□□□ 1.19
TMEM88-201ENST00000301599 GSTO1P78417 241 aa22.45■■□□□ 1.18
TMEM88-201ENST00000301599 MECOMQ03112 1051 aa22.45■■□□□ 1.18
TMEM88-201ENST00000301599 CRHR2Q13324 411 aa22.45■■□□□ 1.18
TMEM88-201ENST00000301599 BRI3BPQ8WY22 251 aa22.45■■□□□ 1.18
TMEM88-201ENST00000301599 ZNF112Q9UJU3 913 aa22.45■■□□□ 1.18
TMEM88-201ENST00000301599 NOP58Q9Y2X3 529 aaKnown RBP22.45■■□□□ 1.18
TMEM88-201ENST00000301599 CETPP11597 493 aa22.44■■□□□ 1.18
TMEM88-201ENST00000301599 RGS3P49796 1198 aa22.44■■□□□ 1.18
TMEM88-201ENST00000301599 MLLT1Q03111 559 aaPredicted RBP22.44■■□□□ 1.18
TMEM88-201ENST00000301599 TNNI3KQ59H18 835 aa22.44■■□□□ 1.18
TMEM88-201ENST00000301599 CCDC158Q5M9N0 1113 aa22.44■■□□□ 1.18
TMEM88-201ENST00000301599 ZFPM1Q8IX07 1006 aa22.44■■□□□ 1.18
TMEM88-201ENST00000301599 HPS5Q9UPZ3 1129 aa22.44■■□□□ 1.18
TMEM88-201ENST00000301599 FPGT-TNNI3KV9GXZ4 949 aa22.44■■□□□ 1.18
TMEM88-201ENST00000301599 GPR75-ASB3A0A0A6YYF3 556 aa22.43■■□□□ 1.18
TMEM88-201ENST00000301599 WDHD1O75717 1129 aaPredicted RBP22.43■■□□□ 1.18
TMEM88-201ENST00000301599 BTDP43251 543 aa22.43■■□□□ 1.18
TMEM88-201ENST00000301599 PPATQ06203 517 aa22.43■■□□□ 1.18
TMEM88-201ENST00000301599 PPIL2Q13356 520 aa22.43■■□□□ 1.18
TMEM88-201ENST00000301599 SNAPC2Q13487 334 aa22.43■■□□□ 1.18
TMEM88-201ENST00000301599 FBXO46Q6PJ61 603 aaPredicted RBP22.43■■□□□ 1.18
TMEM88-201ENST00000301599 TBC1D9Q6ZT07 1266 aa22.43■■□□□ 1.18
TMEM88-201ENST00000301599 ZFYVE28Q9HCC9 887 aa22.43■■□□□ 1.18
TMEM88-201ENST00000301599 MROH7-TTC4A0A0A0MT08 1334 aa22.42■■□□□ 1.18
TMEM88-201ENST00000301599 IRF6O14896 467 aa22.42■■□□□ 1.18
TMEM88-201ENST00000301599 INPP5BP32019 993 aa22.42■■□□□ 1.18
TMEM88-201ENST00000301599 TTC39AQ5SRH9 613 aa22.42■■□□□ 1.18
TMEM88-201ENST00000301599 PI16Q6UXB8 463 aa22.42■■□□□ 1.18
TMEM88-201ENST00000301599 PANK1Q8TE04 598 aa22.42■■□□□ 1.18
TMEM88-201ENST00000301599 ERO1AQ96HE7 468 aa22.42■■□□□ 1.18
TMEM88-201ENST00000301599 RAI14Q9P0K7 980 aa22.42■■□□□ 1.18
TMEM88-201ENST00000301599 LRP2BPQ9P2M1 347 aa22.42■■□□□ 1.18
TMEM88-201ENST00000301599 MAP4K4O95819 1239 aaPredicted RBP22.41■■□□□ 1.18
TMEM88-201ENST00000301599 MCAMP43121 646 aa22.41■■□□□ 1.18
TMEM88-201ENST00000301599 SP3Q02447 781 aa22.41■■□□□ 1.18
TMEM88-201ENST00000301599 TAF1CQ15572 869 aaPredicted RBP22.41■■□□□ 1.18
TMEM88-201ENST00000301599 ZSCAN29Q8IWY8 852 aaPredicted RBP22.41■■□□□ 1.18
TMEM88-201ENST00000301599 NSUN4Q96CB9 384 aaKnown RBP22.41■■□□□ 1.18
TMEM88-201ENST00000301599 FAM43AQ8N2R8 423 aa22.4■■□□□ 1.18
TMEM88-201ENST00000301599 DBNDD2Q9BQY9 259 aa22.4■■□□□ 1.18
TMEM88-201ENST00000301599 ZCCHC17Q9NP64 241 aaKnown RBP22.4■■□□□ 1.18
TMEM88-201ENST00000301599 TRIM17Q9Y577 477 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms