RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 AKNAD1Q5T1N1 836 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 SGMS1Q86VZ5 419 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 MICU3Q86XE3 530 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 FSIP1Q8NA03 581 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 PCDHA7Q9UN72 937 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 TIAM2Q8IVF5 1701 aa23.29■■□□□ 1.32
CXCL16-201ENST00000293778 KINO60870 393 aaKnown RBP23.28■■□□□ 1.32
CXCL16-201ENST00000293778 KCNQ4P56696 695 aa23.28■■□□□ 1.32
CXCL16-201ENST00000293778 STK38Q15208 465 aa23.28■■□□□ 1.32
CXCL16-201ENST00000293778 MYSM1Q5VVJ2 828 aa23.28■■□□□ 1.32
CXCL16-201ENST00000293778 LINC00301Q8NCQ3 95 aa23.28■■□□□ 1.32
CXCL16-201ENST00000293778 ENGASEQ8NFI3 743 aa23.28■■□□□ 1.32
CXCL16-201ENST00000293778 KRT23Q9C075 422 aa23.28■■□□□ 1.32
CXCL16-201ENST00000293778 ZSWIM5Q9P217 1185 aa23.28■■□□□ 1.32
CXCL16-201ENST00000293778 IQSEC3Q9UPP2 1182 aaPredicted RBP23.28■■□□□ 1.32
CXCL16-201ENST00000293778 CDC27P30260 824 aa23.28■■□□□ 1.32
CXCL16-201ENST00000293778 KIF23Q02241 960 aaPredicted RBP23.28■■□□□ 1.32
CXCL16-201ENST00000293778 ZNF830Q96NB3 372 aaPredicted RBP23.28■■□□□ 1.32
CXCL16-201ENST00000293778 ALG1Q9BT22 464 aa23.28■■□□□ 1.32
CXCL16-201ENST00000293778 DNAJC25Q9H1X3 360 aa23.28■■□□□ 1.32
CXCL16-201ENST00000293778 POLR3EQ9NVU0 708 aa23.28■■□□□ 1.32
CXCL16-201ENST00000293778 ZNF804BA4D1E1 1349 aa23.28■■□□□ 1.32
CXCL16-201ENST00000293778 CNTNAP4Q9C0A0 1308 aa23.28■■□□□ 1.32
CXCL16-201ENST00000293778 YEATS4O95619 227 aa23.27■■□□□ 1.32
CXCL16-201ENST00000293778 CAVIN2O95810 425 aa23.27■■□□□ 1.32
CXCL16-201ENST00000293778 LIFRP42702 1097 aa23.27■■□□□ 1.32
CXCL16-201ENST00000293778 ZNF165P49910 485 aa23.27■■□□□ 1.32
CXCL16-201ENST00000293778 MFSD6Q6ZSS7 791 aa23.27■■□□□ 1.32
CXCL16-201ENST00000293778 MIGA1Q8NAN2 632 aa23.27■■□□□ 1.32
CXCL16-201ENST00000293778 GNL3LQ9NVN8 582 aaKnown RBP23.27■■□□□ 1.32
CXCL16-201ENST00000293778 CLIC4Q9Y696 253 aa23.27■■□□□ 1.32
CXCL16-201ENST00000293778 TACC3Q9Y6A5 838 aa23.27■■□□□ 1.32
CXCL16-201ENST00000293778 GOLGA8AA7E2F4 631 aa23.27■■□□□ 1.31
CXCL16-201ENST00000293778 KIF28PB7ZC32 967 aa23.27■■□□□ 1.31
CXCL16-201ENST00000293778 IFIT3O14879 490 aaKnown RBP23.27■■□□□ 1.31
CXCL16-201ENST00000293778 SF3A1Q15459 793 aaKnown RBP23.27■■□□□ 1.31
CXCL16-201ENST00000293778 VPS72Q15906 364 aa23.27■■□□□ 1.31
CXCL16-201ENST00000293778 ADALQ6DHV7 355 aa23.27■■□□□ 1.31
CXCL16-201ENST00000293778 BICDL1Q6ZP65 573 aa23.27■■□□□ 1.31
CXCL16-201ENST00000293778 KCNG4Q8TDN1 519 aa23.27■■□□□ 1.31
CXCL16-201ENST00000293778 MRPS27Q92552 414 aaKnown RBP23.27■■□□□ 1.31
CXCL16-201ENST00000293778 BSDC1Q9NW68 430 aaPredicted RBP23.27■■□□□ 1.31
CXCL16-201ENST00000293778 CHD4Q14839 1912 aa23.26■■□□□ 1.31
CXCL16-201ENST00000293778 CYP7A1P22680 504 aa23.26■■□□□ 1.31
CXCL16-201ENST00000293778 GYG1P46976 350 aa23.26■■□□□ 1.31
CXCL16-201ENST00000293778 UBE4AQ14139 1066 aa23.26■■□□□ 1.31
CXCL16-201ENST00000293778 SYNE3Q6ZMZ3 975 aa23.26■■□□□ 1.31
CXCL16-201ENST00000293778 CCDC144CPQ8IYA2 1237 aa23.26■■□□□ 1.31
CXCL16-201ENST00000293778 TTC12Q9H892 705 aaPredicted RBP23.26■■□□□ 1.31
CXCL16-201ENST00000293778 A0A1W2PQ27 194 aa23.25■■□□□ 1.31
CXCL16-201ENST00000293778 A0A1W2PQ64 194 aa23.25■■□□□ 1.31
CXCL16-201ENST00000293778 A0A1W2PQD8 194 aa23.25■■□□□ 1.31
CXCL16-201ENST00000293778 RGL2O15211 777 aa23.25■■□□□ 1.31
CXCL16-201ENST00000293778 GTF2E1P29083 439 aaPredicted RBP23.25■■□□□ 1.31
CXCL16-201ENST00000293778 TDRD7Q8NHU6 1098 aaKnown RBP23.25■■□□□ 1.31
CXCL16-201ENST00000293778 STAG1Q8WVM7 1258 aa23.25■■□□□ 1.31
CXCL16-201ENST00000293778 NGLY1Q96IV0 654 aa23.25■■□□□ 1.31
CXCL16-201ENST00000293778 C8orf37Q96NL8 207 aa23.25■■□□□ 1.31
CXCL16-201ENST00000293778 AIFM3Q96NN9 605 aa23.25■■□□□ 1.31
CXCL16-201ENST00000293778 SLC12A7Q9Y666 1083 aa23.25■■□□□ 1.31
CXCL16-201ENST00000293778 CCDC69A6NI79 296 aa23.25■■□□□ 1.31
CXCL16-201ENST00000293778 PHKBQ93100 1093 aa23.25■■□□□ 1.31
CXCL16-201ENST00000293778 ABCF2Q9UG63 623 aa23.25■■□□□ 1.31
CXCL16-201ENST00000293778 TBC1D9BQ66K14 1250 aa23.24■■□□□ 1.31
CXCL16-201ENST00000293778 MYL10Q9BUA6 226 aa23.24■■□□□ 1.31
CXCL16-201ENST00000293778 SCN7AQ01118 1682 aa23.24■■□□□ 1.31
CXCL16-201ENST00000293778 A0A1B0GUL6 1792 aa23.24■■□□□ 1.31
CXCL16-201ENST00000293778 SPTLC2O15270 562 aa23.24■■□□□ 1.31
CXCL16-201ENST00000293778 IARSP41252 1262 aaKnown RBP23.24■■□□□ 1.31
CXCL16-201ENST00000293778 NTRK3Q16288 839 aa23.24■■□□□ 1.31
CXCL16-201ENST00000293778 STX1AQ16623 288 aa23.24■■□□□ 1.31
CXCL16-201ENST00000293778 RRP12Q5JTH9 1297 aaKnown RBP23.24■■□□□ 1.31
CXCL16-201ENST00000293778 BCL2L12Q9HB09 334 aa23.24■■□□□ 1.31
CXCL16-201ENST00000293778 TOMM22Q9NS69 142 aa23.24■■□□□ 1.31
CXCL16-201ENST00000293778 FAM217BQ9NTX9 383 aaPredicted RBP23.24■■□□□ 1.31
CXCL16-201ENST00000293778 RAI14Q9P0K7 980 aa23.24■■□□□ 1.31
CXCL16-201ENST00000293778 MINPP1Q9UNW1 487 aa23.24■■□□□ 1.31
CXCL16-201ENST00000293778 SLC10A5Q5PT55 438 aa23.23■■□□□ 1.31
CXCL16-201ENST00000293778 KRT40Q6A162 431 aa23.23■■□□□ 1.31
CXCL16-201ENST00000293778 FMR1NBQ8N0W7 255 aaPredicted RBP23.23■■□□□ 1.31
CXCL16-201ENST00000293778 WTIPA6NIX2 430 aaPredicted RBP23.23■■□□□ 1.31
CXCL16-201ENST00000293778 GOLGA6L6A8MZA4 724 aa23.23■■□□□ 1.31
CXCL16-201ENST00000293778 TPM3P06753 285 aa23.23■■□□□ 1.31
CXCL16-201ENST00000293778 CAVIN4Q5BKX8 364 aa23.23■■□□□ 1.31
CXCL16-201ENST00000293778 ANO1Q5XXA6 986 aa23.23■■□□□ 1.31
CXCL16-201ENST00000293778 SMIM5Q71RC9 77 aa23.23■■□□□ 1.31
CXCL16-201ENST00000293778 ADGRA1Q86SQ6 560 aa23.23■■□□□ 1.31
CXCL16-201ENST00000293778 SART3Q15020 963 aaKnown RBP23.22■■□□□ 1.31
CXCL16-201ENST00000293778 PTF1AQ7RTS3 328 aa23.22■■□□□ 1.31
CXCL16-201ENST00000293778 SPC24Q8NBT2 197 aa23.22■■□□□ 1.31
CXCL16-201ENST00000293778 RNF41Q9H4P4 317 aaPredicted RBP23.22■■□□□ 1.31
CXCL16-201ENST00000293778 CASZ1Q86V15 1759 aa23.22■■□□□ 1.31
CXCL16-201ENST00000293778 COL1A1P02452 1464 aaPredicted RBP23.22■■□□□ 1.31
CXCL16-201ENST00000293778 A0A1B0GVL5 298 aa23.21■■□□□ 1.31
CXCL16-201ENST00000293778 RANBP6O60518 1105 aaKnown RBP23.21■■□□□ 1.31
CXCL16-201ENST00000293778 PIBF1Q8WXW3 757 aa23.21■■□□□ 1.31
CXCL16-201ENST00000293778 CELF1Q92879 486 aaKnown RBP23.21■■□□□ 1.31
CXCL16-201ENST00000293778 NARFQ9UHQ1 456 aa23.21■■□□□ 1.31
CXCL16-201ENST00000293778 TAF1P21675 1872 aa23.21■■□□□ 1.31
CXCL16-201ENST00000293778 MAGEB6P1A0A0J9YX57 407 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms