RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 GUCY1B3Q02153 619 aa13□□□□□ -0.33
NPC1L1-201ENST00000289547 DLGAP5Q15398 846 aa13□□□□□ -0.33
NPC1L1-201ENST00000289547 ENOX2Q16206 610 aaKnown RBP13□□□□□ -0.33
NPC1L1-201ENST00000289547 DNAJC25Q9H1X3 360 aa13□□□□□ -0.33
NPC1L1-201ENST00000289547 ZNF500O60304 480 aaPredicted RBP13□□□□□ -0.33
NPC1L1-201ENST00000289547 DACT1Q9NYF0 836 aa13□□□□□ -0.33
NPC1L1-201ENST00000289547 A0A1B0GUL7 405 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 GBP2P32456 591 aaPredicted RBP12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 KLHL10Q6JEL2 608 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 CEP85Q6P2H3 762 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 RNF216Q9NWF9 866 aaPredicted RBP12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 XDHP47989 1333 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 PSDA5PKW4 1024 aaPredicted RBP12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 PHACTR2O75167 634 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 PPP1R9BQ96SB3 815 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 SH2D4AQ9H788 454 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 VPS18Q9P253 973 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 TNNQ9UQP3 1299 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 KDM2BQ8NHM5 1336 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 ITSN1Q15811 1721 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 EIF5P55010 431 aaKnown RBP12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 CATIPQ7Z7H3 387 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 SUCLG2Q96I99 432 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 CDK5RAP3Q96JB5 506 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 KIF5BP33176 963 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 CCDC91Q7Z6B0 441 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 GAS2L3Q86XJ1 694 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 ZNF408Q9H9D4 720 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 CARMIL3Q8ND23 1372 aa12.99□□□□□ -0.33
NPC1L1-201ENST00000289547 CD163L1Q9NR16 1453 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 NEFHP12036 1026 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 SDSP20132 328 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 TYRO3Q06418 890 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 KAT14Q9H8E8 782 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 LEMD3Q9Y2U8 911 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 TSPY3P0CV98 308 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 TSPY8P0CW00 308 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 STIM1Q13586 685 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 ERO1AQ96HE7 468 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 SRRTQ9BXP5 876 aaKnown RBP12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 PICK1Q9NRD5 415 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 IQSEC2Q5JU85 1478 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 SYT10Q6XYQ8 523 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 ADAMTSL3P82987 1691 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 KRT23Q9C075 422 aa12.98□□□□□ -0.33
NPC1L1-201ENST00000289547 RLBP1P12271 317 aa12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 DNM1Q05193 864 aaKnown RBP12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 DRC1Q96MC2 740 aa12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 CNNM2Q9H8M5 875 aa12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 FSD2A1L4K1 749 aa12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 ISM2Q6H9L7 571 aa12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 FNBP4Q8N3X1 1017 aaPredicted RBP12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 DCPSQ96C86 337 aaKnown RBP12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 EBAG9O00559 213 aa12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 IFIT3O14879 490 aaKnown RBP12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 TSHZ3Q63HK5 1081 aa12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 TEX11Q8IYF3 940 aa12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 GRIN3BO60391 1043 aa12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 ERFEQ4G0M1 354 aa12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 MAGEB6Q8N7X4 407 aa12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 SLC12A7Q9Y666 1083 aa12.97□□□□□ -0.33
NPC1L1-201ENST00000289547 CYP19A1P11511 503 aaPredicted RBP12.96□□□□□ -0.33
NPC1L1-201ENST00000289547 TAF5LO75529 589 aa12.96□□□□□ -0.33
NPC1L1-201ENST00000289547 TMEM132AQ24JP5 1023 aa12.96□□□□□ -0.33
NPC1L1-201ENST00000289547 ZFYVE27Q5T4F4 411 aa12.96□□□□□ -0.33
NPC1L1-201ENST00000289547 UTP14CQ5TAP6 766 aaKnown RBP12.96□□□□□ -0.33
NPC1L1-201ENST00000289547 LUZP1Q86V48 1076 aa12.96□□□□□ -0.33
NPC1L1-201ENST00000289547 CEP57Q86XR8 500 aa12.96□□□□□ -0.33
NPC1L1-201ENST00000289547 RNF113AO15541 343 aaKnown RBP12.96□□□□□ -0.34
NPC1L1-201ENST00000289547 ATP2C2O75185 946 aa12.96□□□□□ -0.34
NPC1L1-201ENST00000289547 MAP2K1Q02750 393 aaPredicted RBP12.96□□□□□ -0.34
NPC1L1-201ENST00000289547 ESR2Q92731 530 aa12.96□□□□□ -0.34
NPC1L1-201ENST00000289547 XAGE2Q96GT9 111 aa12.96□□□□□ -0.34
NPC1L1-201ENST00000289547 HMG20BQ9P0W2 317 aa12.96□□□□□ -0.34
NPC1L1-201ENST00000289547 TNNI3KQ59H18 835 aa12.96□□□□□ -0.34
NPC1L1-201ENST00000289547 ZNF594Q96JF6 807 aaPredicted RBP12.96□□□□□ -0.34
NPC1L1-201ENST00000289547 BCCIPQ9P287 314 aaKnown RBP eCLIP12.96□□□□□ -0.34
NPC1L1-201ENST00000289547 FPGT-TNNI3KV9GXZ4 949 aa12.96□□□□□ -0.34
NPC1L1-201ENST00000289547 ELF2Q15723 593 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 TAOK3Q9H2K8 898 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.95□□□□□ -0.347e-6■■■■□ 21.9
NPC1L1-201ENST00000289547 B4DLN1 442 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 PAFAH1B1P43034 410 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 MRPL12P52815 198 aaKnown RBP12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 MCMDC2Q4G0Z9 681 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 NLRP10Q86W26 655 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 NCOA7Q8NI08 942 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 TAF4BQ92750 862 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 MCM9Q9NXL9 1143 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 F13A1P00488 732 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 SLC15A2Q16348 729 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 SULF1Q8IWU6 871 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 TANGO6Q9C0B7 1094 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 USP32Q8NFA0 1604 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 GBP6Q6ZN66 633 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 TEKT1Q969V4 418 aa12.95□□□□□ -0.34
NPC1L1-201ENST00000289547 JAG2Q9Y219 1238 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms