RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 ERVV-1B6SEH8 477 aa11.55□□□□□ -0.56
HMGCR-201ENST00000287936 MYO1BO43795 1136 aa11.55□□□□□ -0.56
HMGCR-201ENST00000287936 RANBP6O60518 1105 aaKnown RBP11.55□□□□□ -0.56
HMGCR-201ENST00000287936 ANKRD18AQ8IVF6 992 aa11.55□□□□□ -0.56
HMGCR-201ENST00000287936 NIP7Q9Y221 180 aaKnown RBP eCLIP11.55□□□□□ -0.56
HMGCR-201ENST00000287936 LMTK3Q96Q04 1460 aa11.55□□□□□ -0.56
HMGCR-201ENST00000287936 GOLGA6L9A6NEM1 432 aa11.55□□□□□ -0.56
HMGCR-201ENST00000287936 IL6STP40189 918 aaPredicted RBP11.55□□□□□ -0.56
HMGCR-201ENST00000287936 PYM1Q9BRP8 204 aaKnown RBP11.55□□□□□ -0.56
HMGCR-201ENST00000287936 DEXIO95424 95 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 ISM2Q6H9L7 571 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 C11orf57Q6ZUT1 292 aaPredicted RBP11.54□□□□□ -0.56
HMGCR-201ENST00000287936 MB21D2Q8IYB1 491 aaPredicted RBP11.54□□□□□ -0.56
HMGCR-201ENST00000287936 TTLL11Q8NHH1 800 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 ARMT1Q9H993 441 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 CLIC4Q9Y696 253 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 MAGEB6P1A0A0J9YX57 407 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 CALM1P0DP23 149 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 CALM2P0DP24 149 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 CALM3P0DP25 149 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 PFKFB1P16118 471 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 LMOD1P29536 600 aaPredicted RBP11.54□□□□□ -0.56
HMGCR-201ENST00000287936 PPP2R5BQ15173 497 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 DDB1Q16531 1140 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 SLFNL1Q499Z3 407 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 AKNAD1Q5T1N1 836 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 PLA2G4DQ86XP0 818 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 PIGBQ92521 554 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 FTOQ9C0B1 505 aaKnown RBP eCLIP11.54□□□□□ -0.56
HMGCR-201ENST00000287936 CCDC87Q9NVE4 849 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 NDUFA8P51970 172 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 KIF23Q02241 960 aaPredicted RBP11.54□□□□□ -0.56
HMGCR-201ENST00000287936 TIGD1Q96MW7 591 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 JCADQ9P266 1359 aa11.54□□□□□ -0.56
HMGCR-201ENST00000287936 LRMPQ12912 555 aa11.53□□□□□ -0.56
HMGCR-201ENST00000287936 SLC39A14Q15043 492 aa11.53□□□□□ -0.56
HMGCR-201ENST00000287936 PES1O00541 588 aaKnown RBP11.53□□□□□ -0.56
HMGCR-201ENST00000287936 PHKA1P46020 1223 aa11.53□□□□□ -0.56
HMGCR-201ENST00000287936 RBM43Q6ZSC3 357 aaKnown RBP11.53□□□□□ -0.56
HMGCR-201ENST00000287936 LRRC8AQ8IWT6 810 aa11.53□□□□□ -0.56
HMGCR-201ENST00000287936 IFNL3Q8IZI9 196 aa11.53□□□□□ -0.56
HMGCR-201ENST00000287936 SH2B2O14492 632 aaPredicted RBP11.53□□□□□ -0.56
HMGCR-201ENST00000287936 PPP6R2O75170 966 aa11.53□□□□□ -0.56
HMGCR-201ENST00000287936 ZNF771Q7L3S4 317 aaPredicted RBP11.53□□□□□ -0.56
HMGCR-201ENST00000287936 KCNH3Q9ULD8 1083 aa11.53□□□□□ -0.56
HMGCR-201ENST00000287936 ADD1P35611 737 aaKnown RBP11.53□□□□□ -0.56
HMGCR-201ENST00000287936 APOA5Q6Q788 366 aa11.53□□□□□ -0.56
HMGCR-201ENST00000287936 PHKBQ93100 1093 aa11.53□□□□□ -0.56
HMGCR-201ENST00000287936 CHGBP05060 677 aa11.52□□□□□ -0.56
HMGCR-201ENST00000287936 MCAMP43121 646 aa11.52□□□□□ -0.56
HMGCR-201ENST00000287936 IFIT1BQ5T764 474 aaKnown RBP11.52□□□□□ -0.56
HMGCR-201ENST00000287936 CCAR2Q8N163 923 aaKnown RBP11.52□□□□□ -0.56
HMGCR-201ENST00000287936 ZBTB1Q9Y2K1 713 aa11.52□□□□□ -0.56
HMGCR-201ENST00000287936 TRIM75PA6NK02 468 aa11.52□□□□□ -0.57
HMGCR-201ENST00000287936 CSF1RP07333 972 aa11.52□□□□□ -0.57
HMGCR-201ENST00000287936 FANCCQ00597 558 aa11.52□□□□□ -0.57
HMGCR-201ENST00000287936 PI16Q6UXB8 463 aa11.52□□□□□ -0.57
HMGCR-201ENST00000287936 BCL11BQ9C0K0 894 aaPredicted RBP11.52□□□□□ -0.57
HMGCR-201ENST00000287936 SLU7O95391 586 aaKnown RBP11.52□□□□□ -0.57
HMGCR-201ENST00000287936 DIS3L2Q8IYB7 885 aaKnown RBP11.52□□□□□ -0.57
HMGCR-201ENST00000287936 UBXN4Q92575 508 aa11.52□□□□□ -0.57
HMGCR-201ENST00000287936 AGXT2Q9BYV1 514 aa11.52□□□□□ -0.57
HMGCR-201ENST00000287936 CRNKL1Q9BZJ0 848 aaKnown RBP11.52□□□□□ -0.57
HMGCR-201ENST00000287936 BCL2L12Q9HB09 334 aa11.52□□□□□ -0.57
HMGCR-201ENST00000287936 RBM28Q9NW13 759 aaKnown RBP11.52□□□□□ -0.57
HMGCR-201ENST00000287936 NRBP1Q9UHY1 535 aa11.52□□□□□ -0.57
HMGCR-201ENST00000287936 IPO7O95373 1038 aaKnown RBP11.52□□□□□ -0.57
HMGCR-201ENST00000287936 CTDSPL2Q05D32 466 aa11.52□□□□□ -0.57
HMGCR-201ENST00000287936 MIGA1Q8NAN2 632 aa11.52□□□□□ -0.57
HMGCR-201ENST00000287936 ZNF512BQ96KM6 892 aaPredicted RBP11.52□□□□□ -0.57
HMGCR-201ENST00000287936 GOLPH3LQ9H4A5 285 aa11.52□□□□□ -0.57
HMGCR-201ENST00000287936 KIF5BP33176 963 aa11.51□□□□□ -0.57
HMGCR-201ENST00000287936 CBX1P83916 185 aa11.51□□□□□ -0.57
HMGCR-201ENST00000287936 BICDL1Q6ZP65 573 aa11.51□□□□□ -0.57
HMGCR-201ENST00000287936 N4BP2Q86UW6 1770 aaPredicted RBP11.51□□□□□ -0.57
HMGCR-201ENST00000287936 GPS2Q13227 327 aa11.51□□□□□ -0.57
HMGCR-201ENST00000287936 STIM1Q13586 685 aa11.51□□□□□ -0.57
HMGCR-201ENST00000287936 RGS22Q8NE09 1264 aa11.51□□□□□ -0.57
HMGCR-201ENST00000287936 CACTINQ8WUQ7 758 aaKnown RBP11.51□□□□□ -0.57
HMGCR-201ENST00000287936 PIH1D3Q9NQM4 214 aaKnown RBP11.51□□□□□ -0.57
HMGCR-201ENST00000287936 GPHNQ9NQX3 736 aaPredicted RBP11.51□□□□□ -0.57
HMGCR-201ENST00000287936 CTDNEP1O95476 244 aa11.51□□□□□ -0.57
HMGCR-201ENST00000287936 KRT2P35908 639 aa11.51□□□□□ -0.57
HMGCR-201ENST00000287936 LIFRP42702 1097 aa11.51□□□□□ -0.57
HMGCR-201ENST00000287936 PDE4BQ07343 736 aa11.51□□□□□ -0.57
HMGCR-201ENST00000287936 TEX35Q5T0J7 233 aa11.51□□□□□ -0.57
HMGCR-201ENST00000287936 FMR1NBQ8N0W7 255 aaPredicted RBP11.51□□□□□ -0.57
HMGCR-201ENST00000287936 DENND2AQ9ULE3 1009 aa11.51□□□□□ -0.57
HMGCR-201ENST00000287936 LRP10Q7Z4F1 713 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 MYL10Q9BUA6 226 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 XPO4Q9C0E2 1151 aaKnown RBP11.5□□□□□ -0.57
HMGCR-201ENST00000287936 RIPOR2Q9Y4F9 1068 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 ZNF142P52746 1687 aaPredicted RBP11.5□□□□□ -0.57
HMGCR-201ENST00000287936 NLRP5P59047 1200 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 ALX1Q15699 326 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 SPTY2D1Q68D10 685 aaPredicted RBP11.5□□□□□ -0.57
HMGCR-201ENST00000287936 NOSTRINQ8IVI9 506 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 ERCC4Q92889 916 aaPredicted RBP11.5□□□□□ -0.57
HMGCR-201ENST00000287936 FEZ1Q99689 392 aa11.5□□□□□ -0.57
HMGCR-201ENST00000287936 WWC3Q9ULE0 1092 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms