RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 EEF2P13639 858 aaKnown RBP18.49■□□□□ 0.55
SH3RF1-201ENST00000284637 LONRF3Q496Y0 759 aa18.49■□□□□ 0.55
SH3RF1-201ENST00000284637 PUS7Q96PZ0 661 aaKnown RBP18.49■□□□□ 0.55
SH3RF1-201ENST00000284637 KCNK9Q9NPC2 374 aa18.49■□□□□ 0.55
SH3RF1-201ENST00000284637 GOLGA6AQ9NYA3 693 aa18.49■□□□□ 0.55
SH3RF1-201ENST00000284637 NPATQ14207 1427 aa18.49■□□□□ 0.55
SH3RF1-201ENST00000284637 MBD4O95243 580 aa18.49■□□□□ 0.55
SH3RF1-201ENST00000284637 PKP1Q13835 747 aa18.49■□□□□ 0.55
SH3RF1-201ENST00000284637 NOC4LQ9BVI4 516 aaKnown RBP18.49■□□□□ 0.55
SH3RF1-201ENST00000284637 RAPGEF1Q13905 1077 aa18.49■□□□□ 0.55
SH3RF1-201ENST00000284637 TTC14Q96N46 770 aa18.48■□□□□ 0.55
SH3RF1-201ENST00000284637 LLPHQ9BRT6 129 aaKnown RBP18.48■□□□□ 0.55
SH3RF1-201ENST00000284637 NIP7Q9Y221 180 aaKnown RBP eCLIP18.48■□□□□ 0.55
SH3RF1-201ENST00000284637 ERBB4Q15303 1308 aa18.48■□□□□ 0.55
SH3RF1-201ENST00000284637 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
SH3RF1-201ENST00000284637 NFE2L3Q9Y4A8 694 aa18.48■□□□□ 0.55
SH3RF1-201ENST00000284637 PPARDQ03181 441 aa18.48■□□□□ 0.55
SH3RF1-201ENST00000284637 TNNI3KQ59H18 835 aa18.48■□□□□ 0.55
SH3RF1-201ENST00000284637 FPGT-TNNI3KV9GXZ4 949 aa18.48■□□□□ 0.55
SH3RF1-201ENST00000284637 RPAINQ86UA6 219 aa18.48■□□□□ 0.55
SH3RF1-201ENST00000284637 RRP36Q96EU6 259 aaKnown RBP18.48■□□□□ 0.55
SH3RF1-201ENST00000284637 TTF2Q9UNY4 1162 aaKnown RBP18.48■□□□□ 0.55
SH3RF1-201ENST00000284637 DENND4BO75064 1496 aaPredicted RBP18.47■□□□□ 0.55
SH3RF1-201ENST00000284637 COL17A1Q9UMD9 1497 aaPredicted RBP18.47■□□□□ 0.55
SH3RF1-201ENST00000284637 IRS4O14654 1257 aaPredicted RBP18.47■□□□□ 0.55
SH3RF1-201ENST00000284637 BRD3Q15059 726 aa18.47■□□□□ 0.55
SH3RF1-201ENST00000284637 ZNF622Q969S3 477 aaKnown RBP eCLIP18.47■□□□□ 0.55
SH3RF1-201ENST00000284637 CHAMP1Q96JM3 812 aa18.47■□□□□ 0.55
SH3RF1-201ENST00000284637 SPATA24Q86W54 205 aa18.47■□□□□ 0.55
SH3RF1-201ENST00000284637 SAMD15Q9P1V8 674 aa18.47■□□□□ 0.55
SH3RF1-201ENST00000284637 MAP3K19Q56UN5 1328 aa18.47■□□□□ 0.55
SH3RF1-201ENST00000284637 DDX21Q9NR30 783 aaKnown RBP eCLIP18.47■□□□□ 0.55
SH3RF1-201ENST00000284637 RRP15Q9Y3B9 282 aaKnown RBP18.47■□□□□ 0.55
SH3RF1-201ENST00000284637 TRAF5O00463 557 aa18.47■□□□□ 0.55
SH3RF1-201ENST00000284637 SMARCC2Q8TAQ2 1214 aa18.47■□□□□ 0.55
SH3RF1-201ENST00000284637 USP37Q86T82 979 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 DIS3L2Q8IYB7 885 aaKnown RBP18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 LETM2Q2VYF4 491 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 DCAF17Q5H9S7 520 aaPredicted RBP18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 CYP26C1Q6V0L0 522 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 GPIHBP1Q8IV16 184 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 JAG2Q9Y219 1238 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 JRKLQ9Y4A0 524 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 COMMD10Q9Y6G5 202 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 ARHGAP6O43182 974 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 MTX1Q13505 466 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 TSGA10Q9BZW7 698 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 MTRF1LQ9UGC7 380 aaKnown RBP18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 ATP6V0A2Q9Y487 856 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 ZFYVE9O95405 1425 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 ATP2A1O14983 1001 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 NLRP12P59046 1061 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 C8orf74Q6P047 294 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 HS2ST1Q7LGA3 356 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 NLRP3Q96P20 1036 aa18.46■□□□□ 0.55
SH3RF1-201ENST00000284637 GSPT1P15170 499 aaKnown RBP18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 GNA11P29992 359 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 RIMS2Q9UQ26 1411 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 ATP8B1O43520 1251 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 TERF2Q15554 542 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 CHL1O00533 1208 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 LACTBP83111 547 aaPredicted RBP18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 PLS1Q14651 629 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 GPT2Q8TD30 523 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 SYNRGQ9UMZ2 1314 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 FAM13AO94988 1023 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 PDE4DQ08499 809 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 LRMPQ12912 555 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 PPP1R7Q15435 360 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 TSNARE1Q96NA8 513 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 ANGEL1Q9UNK9 670 aaKnown RBP18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 DUOX2Q9NRD8 1548 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 INSRP06213 1382 aa18.45■□□□□ 0.54
SH3RF1-201ENST00000284637 IL13P35225 146 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 RFC4P35249 363 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 PSMD1Q99460 953 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 MYL10Q9BUA6 226 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 XPO4Q9C0E2 1151 aaKnown RBP18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 AOX1Q06278 1338 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 RNMTO43148 476 aaKnown RBP18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 ACSBG1Q96GR2 724 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 KRT9P35527 623 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 CALCOCO2Q13137 446 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 AKNAD1Q5T1N1 836 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 PIK3AP1Q6ZUJ8 805 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 DZIP3Q86Y13 1208 aaKnown RBP18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 MLKLQ8NB16 471 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 PHKBQ93100 1093 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 PSMB7Q99436 277 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 V9GY48 417 aaPredicted RBP18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 DEXIO95424 95 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 ME3Q16798 604 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 AP1ARQ63HQ0 302 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 TRMT44Q8IYL2 757 aaKnown RBP18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 JAKMIP2Q96AA8 810 aa18.44■□□□□ 0.54
SH3RF1-201ENST00000284637 CCDC160A6NGH7 325 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 EYA2O00167 538 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 CUTAO60888 179 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 FAM89AQ96GI7 184 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 FERMT1Q9BQL6 677 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms