RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 NEK1Q96PY6 1258 aa18.51■□□□□ 0.55
MAP1LC3B-201ENST00000268607 NHSQ6T4R5 1651 aa18.5■□□□□ 0.55
MAP1LC3B-201ENST00000268607 SCARF1Q14162 830 aa18.5■□□□□ 0.55
MAP1LC3B-201ENST00000268607 BMS1Q14692 1282 aaKnown RBP18.5■□□□□ 0.55
MAP1LC3B-201ENST00000268607 XAGE2Q96GT9 111 aa18.5■□□□□ 0.55
MAP1LC3B-201ENST00000268607 NARFQ9UHQ1 456 aa18.5■□□□□ 0.55
MAP1LC3B-201ENST00000268607 LRRN4CLQ8ND94 238 aa18.5■□□□□ 0.55
MAP1LC3B-201ENST00000268607 CHMP4CQ96CF2 233 aa18.5■□□□□ 0.55
MAP1LC3B-201ENST00000268607 TAF1P21675 1872 aa18.5■□□□□ 0.55
MAP1LC3B-201ENST00000268607 PPFIA3O75145 1194 aa18.49■□□□□ 0.55
MAP1LC3B-201ENST00000268607 TEX2Q8IWB9 1127 aa18.49■□□□□ 0.55
MAP1LC3B-201ENST00000268607 DDX11Q96FC9 970 aa18.49■□□□□ 0.55
MAP1LC3B-201ENST00000268607 SETDB2Q96T68 719 aa18.49■□□□□ 0.55
MAP1LC3B-201ENST00000268607 FHOD1Q9Y613 1164 aa18.49■□□□□ 0.55
MAP1LC3B-201ENST00000268607 CEBPZQ03701 1054 aaKnown RBP18.49■□□□□ 0.55
MAP1LC3B-201ENST00000268607 STOX1Q6ZVD7 989 aa18.49■□□□□ 0.55
MAP1LC3B-201ENST00000268607 NBPF5PQ86XG9 351 aaPredicted RBP18.49■□□□□ 0.55
MAP1LC3B-201ENST00000268607 TMX1Q9H3N1 280 aa18.49■□□□□ 0.55
MAP1LC3B-201ENST00000268607 GPR108Q9NPR9 543 aa18.49■□□□□ 0.55
MAP1LC3B-201ENST00000268607 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
MAP1LC3B-201ENST00000268607 ZNF652Q9Y2D9 606 aa18.49■□□□□ 0.55
MAP1LC3B-201ENST00000268607 COL5A3P25940 1745 aaPredicted RBP18.49■□□□□ 0.55
MAP1LC3B-201ENST00000268607 ANKRD18BA2A2Z9 1011 aa18.48■□□□□ 0.55
MAP1LC3B-201ENST00000268607 BECN2A8MW95 431 aa18.48■□□□□ 0.55
MAP1LC3B-201ENST00000268607 ZNF827Q17R98 1081 aa18.48■□□□□ 0.55
MAP1LC3B-201ENST00000268607 METTL24Q5JXM2 366 aa18.48■□□□□ 0.55
MAP1LC3B-201ENST00000268607 TTC39AQ5SRH9 613 aa18.48■□□□□ 0.55
MAP1LC3B-201ENST00000268607 Q6ZUG5 572 aa18.48■□□□□ 0.55
MAP1LC3B-201ENST00000268607 CIAO1O76071 339 aa18.48■□□□□ 0.55
MAP1LC3B-201ENST00000268607 TTLL5Q6EMB2 1281 aa18.48■□□□□ 0.55
MAP1LC3B-201ENST00000268607 CHST3Q7LGC8 479 aa18.48■□□□□ 0.55
MAP1LC3B-201ENST00000268607 TFCP2L1Q9NZI6 479 aa18.48■□□□□ 0.55
MAP1LC3B-201ENST00000268607 U3KPZ7 1027 aaPredicted RBP18.48■□□□□ 0.55
MAP1LC3B-201ENST00000268607 CAVIN2O95810 425 aa18.47■□□□□ 0.55
MAP1LC3B-201ENST00000268607 HSP90B1P14625 803 aaKnown RBP18.47■□□□□ 0.55
MAP1LC3B-201ENST00000268607 FBXO41Q8TF61 875 aa18.47■□□□□ 0.55
MAP1LC3B-201ENST00000268607 COL4A1P02462 1669 aa18.47■□□□□ 0.55
MAP1LC3B-201ENST00000268607 POLR3GO15318 223 aaPredicted RBP18.47■□□□□ 0.55
MAP1LC3B-201ENST00000268607 JAK2O60674 1132 aa18.47■□□□□ 0.55
MAP1LC3B-201ENST00000268607 H2AFXP16104 143 aaPredicted RBP18.47■□□□□ 0.55
MAP1LC3B-201ENST00000268607 CCDC158Q5M9N0 1113 aa18.47■□□□□ 0.55
MAP1LC3B-201ENST00000268607 RC3H1Q5TC82 1133 aaKnown RBP18.47■□□□□ 0.55
MAP1LC3B-201ENST00000268607 SECISBP2LQ93073 1101 aaKnown RBP18.47■□□□□ 0.55
MAP1LC3B-201ENST00000268607 ABCC12Q96J65 1359 aa18.47■□□□□ 0.55
MAP1LC3B-201ENST00000268607 M0R2C6 588 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 EN1Q05925 392 aaPredicted RBP18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 WASHC4Q2M389 1173 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 TSGA10IPQ3SY00 556 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 MSL1Q68DK7 614 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 BRF1Q92994 677 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 OSBP2Q969R2 916 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 MAST3O60307 1309 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 CDHR2Q9BYE9 1310 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 CLCN6P51797 869 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 NFIXQ14938 502 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 ZMYM1Q5SVZ6 1142 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 SYT10Q6XYQ8 523 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 FBXW7Q969H0 707 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 EFCC1Q9HA90 598 aa18.46■□□□□ 0.55
MAP1LC3B-201ENST00000268607 RNF113AO15541 343 aaKnown RBP18.46■□□□□ 0.54
MAP1LC3B-201ENST00000268607 HSPD1P10809 573 aaKnown RBP18.46■□□□□ 0.54
MAP1LC3B-201ENST00000268607 ZAP70P43403 619 aa18.46■□□□□ 0.54
MAP1LC3B-201ENST00000268607 PLA2G4AP47712 749 aa18.46■□□□□ 0.54
MAP1LC3B-201ENST00000268607 SNW1Q13573 536 aaKnown RBP18.46■□□□□ 0.54
MAP1LC3B-201ENST00000268607 ANKRD1Q15327 319 aa18.46■□□□□ 0.54
MAP1LC3B-201ENST00000268607 STX1AQ16623 288 aa18.46■□□□□ 0.54
MAP1LC3B-201ENST00000268607 DHX40Q8IX18 779 aaKnown RBP18.46■□□□□ 0.54
MAP1LC3B-201ENST00000268607 PLA2G12BQ9BX93 195 aa18.46■□□□□ 0.54
MAP1LC3B-201ENST00000268607 RASSF4Q9H2L5 321 aa18.46■□□□□ 0.54
MAP1LC3B-201ENST00000268607 TRIM66O15016 1216 aa18.45■□□□□ 0.54
MAP1LC3B-201ENST00000268607 PNMA6AP0CW24 399 aaPredicted RBP18.45■□□□□ 0.54
MAP1LC3B-201ENST00000268607 RIPOR2Q9Y4F9 1068 aa18.45■□□□□ 0.54
MAP1LC3B-201ENST00000268607 FOSBP53539 338 aa18.45■□□□□ 0.54
MAP1LC3B-201ENST00000268607 KRT32Q14532 448 aa18.45■□□□□ 0.54
MAP1LC3B-201ENST00000268607 PARP10Q53GL7 1025 aa18.45■□□□□ 0.54
MAP1LC3B-201ENST00000268607 CLEC4GQ6UXB4 293 aa18.45■□□□□ 0.54
MAP1LC3B-201ENST00000268607 KRBA2Q6ZNG9 492 aa18.45■□□□□ 0.54
MAP1LC3B-201ENST00000268607 ERCC4Q92889 916 aaPredicted RBP18.45■□□□□ 0.54
MAP1LC3B-201ENST00000268607 IQSEC3Q9UPP2 1182 aaPredicted RBP18.45■□□□□ 0.54
MAP1LC3B-201ENST00000268607 CHRM1P11229 460 aaPredicted RBP18.44■□□□□ 0.54
MAP1LC3B-201ENST00000268607 HAND2P61296 217 aa18.44■□□□□ 0.54
MAP1LC3B-201ENST00000268607 C10orf67Q8IYJ2 551 aa18.44■□□□□ 0.54
MAP1LC3B-201ENST00000268607 MPHOSPH8Q99549 860 aa18.44■□□□□ 0.54
MAP1LC3B-201ENST00000268607 HELLSQ9NRZ9 838 aa18.44■□□□□ 0.54
MAP1LC3B-201ENST00000268607 RESTQ13127 1097 aa18.44■□□□□ 0.54
MAP1LC3B-201ENST00000268607 E4F1Q66K89 784 aaPredicted RBP18.44■□□□□ 0.54
MAP1LC3B-201ENST00000268607 DEFB132Q7Z7B7 95 aa18.44■□□□□ 0.54
MAP1LC3B-201ENST00000268607 CELF1Q92879 486 aaKnown RBP18.44■□□□□ 0.54
MAP1LC3B-201ENST00000268607 AKAP2Q9Y2D5 859 aa18.44■□□□□ 0.54
MAP1LC3B-201ENST00000268607 EZH2Q15910 746 aaKnown RBP18.43■□□□□ 0.54
MAP1LC3B-201ENST00000268607 L2HGDHQ9H9P8 463 aa18.43■□□□□ 0.54
MAP1LC3B-201ENST00000268607 C4BP0C0L5 1744 aa18.43■□□□□ 0.54
MAP1LC3B-201ENST00000268607 GYS1P13807 737 aa18.43■□□□□ 0.54
MAP1LC3B-201ENST00000268607 NOP2P46087 812 aaKnown RBP18.43■□□□□ 0.54
MAP1LC3B-201ENST00000268607 GYS2P54840 703 aa18.43■□□□□ 0.54
MAP1LC3B-201ENST00000268607 ST5P78524 1137 aa18.43■□□□□ 0.54
MAP1LC3B-201ENST00000268607 ARHGAP29Q52LW3 1261 aa18.43■□□□□ 0.54
MAP1LC3B-201ENST00000268607 CCAR1Q8IX12 1150 aaKnown RBP18.43■□□□□ 0.54
MAP1LC3B-201ENST00000268607 FTOQ9C0B1 505 aaKnown RBP eCLIP18.43■□□□□ 0.54
MAP1LC3B-201ENST00000268607 PDGFDQ9GZP0 370 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms