RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 KDM2BQ8NHM5 1336 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 MYO1BO43795 1136 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 BRAPQ7Z569 592 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 TRIM47Q96LD4 638 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 CCDC42Q96M95 316 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 PDE11AQ9HCR9 933 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 ABCF2Q9UG63 623 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 NPC1L1Q9UHC9 1359 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 WDHD1O75717 1129 aaPredicted RBP6.39□□□□□ -1.39
VCAN-201ENST00000265077 CALML3P27482 149 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 WTAPQ15007 396 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 TRIM68Q6AZZ1 485 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 PRPF38AQ8NAV1 312 aaKnown RBP6.39□□□□□ -1.39
VCAN-201ENST00000265077 CCDC8Q9H0W5 538 aaPredicted RBP6.39□□□□□ -1.39
VCAN-201ENST00000265077 A0A1W2PRG0 241 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 MICU3Q86XE3 530 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 TEX13AQ9BXU3 409 aaPredicted RBP6.39□□□□□ -1.39
VCAN-201ENST00000265077 TCOF1Q13428 1488 aaKnown RBP6.39□□□□□ -1.39
VCAN-201ENST00000265077 CRYMQ14894 314 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 NAIF1Q69YI7 327 aaPredicted RBP6.39□□□□□ -1.39
VCAN-201ENST00000265077 USP37Q86T82 979 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 ZCRB1Q8TBF4 217 aaKnown RBP6.39□□□□□ -1.39
VCAN-201ENST00000265077 CARD10Q9BWT7 1032 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 SLC26A6Q9BXS9 759 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 NOS1P29475 1434 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 CTNNA2P26232 953 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 ABCD1P33897 745 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 GYS2P54840 703 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 E2F5Q15329 346 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 Q6ZUG5 572 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 RAB11FIP4Q86YS3 637 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 ESR2Q92731 530 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 ABTB1Q969K4 478 aaPredicted RBP6.39□□□□□ -1.39
VCAN-201ENST00000265077 STAT6P42226 847 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 DNAJC25Q9H1X3 360 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 ZBTB40Q9NUA8 1239 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 RTL9Q8NET4 1388 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 NME9Q86XW9 330 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 RHPN1Q8TCX5 695 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 HOMER2Q9NSB8 354 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.39□□□□□ -1.39
VCAN-201ENST00000265077 LAMB3Q13751 1172 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 TTC19Q6DKK2 380 aaPredicted RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 PDCD7Q8N8D1 485 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 DCTPP1Q9H773 170 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 SNUPNO95149 360 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 CUL3Q13618 768 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 MRPL50Q8N5N7 158 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 RBM8AQ9Y5S9 174 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 RNF8O76064 485 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 ATP8B2P98198 1209 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 SEC62Q99442 399 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 C14orf93Q9H972 538 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 TBCAO75347 108 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 DHX32Q7L7V1 743 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 SPINK5Q9NQ38 1064 aaPredicted RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 MACROD2A1Z1Q3 448 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 ATP2A1O14983 1001 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 FAM160A1Q05DH4 1040 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 ACBD5Q5T8D3 534 aaPredicted RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 UBA5Q9GZZ9 404 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 ADAM21Q9UKJ8 722 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 PI4KAP2A4QPH2 592 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 SPTLC2O15270 562 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 FERP16591 822 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 GNGT1P63211 74 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 RNF10Q8N5U6 811 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 PI4KAP1Q8N8J0 262 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 STAG1Q8WVM7 1258 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 TRIM7Q9C029 511 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 HIP1RO75146 1068 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 CALM1P0DP23 149 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 CALM2P0DP24 149 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 CALM3P0DP25 149 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 PRPF4BQ13523 1007 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 PUF60Q9UHX1 559 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 G3BP2Q9UN86 482 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 TPD52L2O43399 206 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 NBPF10Q6P3W6 841 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 RNF217Q8TC41 542 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 OSBPL9Q96SU4 736 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 USP26Q9BXU7 913 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 IMPACTQ9P2X3 320 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 USH1CQ9Y6N9 552 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 PLB1Q6P1J6 1458 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 KLF18A0A0U1RQI7 1052 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 GNAT2P19087 354 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 ATP5DP30049 168 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 MFSD4BQ5TF39 518 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 NAA16Q6N069 864 aaPredicted RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 RABGGTAQ92696 567 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 BRF1Q92994 677 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 STMN2Q93045 179 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 ALG1Q9BT22 464 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 BCAS4Q8TDM0 211 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 UIMC1Q96RL1 719 aa6.38□□□□□ -1.39
VCAN-201ENST00000265077 CDC5LQ99459 802 aaKnown RBP6.38□□□□□ -1.39
VCAN-201ENST00000265077 SPAG5Q96R06 1193 aa6.37□□□□□ -1.39
VCAN-201ENST00000265077 TSPYL2Q9H2G4 693 aaPredicted RBP6.37□□□□□ -1.39
VCAN-201ENST00000265077 F6X3S4 739 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms