RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 TBCAO75347 108 aaKnown RBP19.01■□□□□ 0.63
PHRF1-201ENST00000264555 DIS3L2Q8IYB7 885 aaKnown RBP19.01■□□□□ 0.63
PHRF1-201ENST00000264555 SEC62Q99442 399 aaKnown RBP19.01■□□□□ 0.63
PHRF1-201ENST00000264555 KCNH3Q9ULD8 1083 aa19.01■□□□□ 0.63
PHRF1-201ENST00000264555 CIAO1O76071 339 aa19.01■□□□□ 0.63
PHRF1-201ENST00000264555 DNAI1Q9UI46 699 aa19.01■□□□□ 0.63
PHRF1-201ENST00000264555 CUTAO60888 179 aa19.01■□□□□ 0.63
PHRF1-201ENST00000264555 CTDSPL2Q05D32 466 aa19.01■□□□□ 0.63
PHRF1-201ENST00000264555 PKP1Q13835 747 aa19.01■□□□□ 0.63
PHRF1-201ENST00000264555 POLA2Q14181 598 aa19.01■□□□□ 0.63
PHRF1-201ENST00000264555 DBNLQ9UJU6 430 aaKnown RBP19.01■□□□□ 0.63
PHRF1-201ENST00000264555 PRAMEF22A3QJZ6 481 aa19■□□□□ 0.63
PHRF1-201ENST00000264555 WDR66Q8TBY9 1149 aa19■□□□□ 0.63
PHRF1-201ENST00000264555 EYA3Q99504 573 aa19■□□□□ 0.63
PHRF1-201ENST00000264555 TFCP2L1Q9NZI6 479 aa19■□□□□ 0.63
PHRF1-201ENST00000264555 HDAC9Q9UKV0 1011 aa19■□□□□ 0.63
PHRF1-201ENST00000264555 CYLC1P35663 651 aaPredicted RBP19■□□□□ 0.63
PHRF1-201ENST00000264555 KRT79Q5XKE5 535 aa19■□□□□ 0.63
PHRF1-201ENST00000264555 MTMR6Q9Y217 621 aa19■□□□□ 0.63
PHRF1-201ENST00000264555 MAP3K15Q6ZN16 1313 aa19■□□□□ 0.63
PHRF1-201ENST00000264555 PFKFB2O60825 505 aa19■□□□□ 0.63
PHRF1-201ENST00000264555 PARP1P09874 1014 aaKnown RBP19■□□□□ 0.63
PHRF1-201ENST00000264555 KRT40Q6A162 431 aa19■□□□□ 0.63
PHRF1-201ENST00000264555 CERS3Q8IU89 383 aa19■□□□□ 0.63
PHRF1-201ENST00000264555 PPP4R3AQ6IN85 833 aa19■□□□□ 0.63
PHRF1-201ENST00000264555 TEX11Q8IYF3 940 aa19■□□□□ 0.63
PHRF1-201ENST00000264555 V9GY48 417 aaPredicted RBP19■□□□□ 0.63
PHRF1-201ENST00000264555 RASEFQ8IZ41 740 aa18.99■□□□□ 0.63
PHRF1-201ENST00000264555 AKR1B10O60218 316 aa18.99■□□□□ 0.63
PHRF1-201ENST00000264555 DTNBO60941 627 aa18.99■□□□□ 0.63
PHRF1-201ENST00000264555 ZNF174Q15697 407 aa18.99■□□□□ 0.63
PHRF1-201ENST00000264555 ANTXR1Q9H6X2 564 aa18.99■□□□□ 0.63
PHRF1-201ENST00000264555 AKNAD1Q5T1N1 836 aa18.99■□□□□ 0.63
PHRF1-201ENST00000264555 CBX8Q9HC52 389 aa18.99■□□□□ 0.63
PHRF1-201ENST00000264555 PARP3Q9Y6F1 533 aa18.99■□□□□ 0.63
PHRF1-201ENST00000264555 TULP4Q9NRJ4 1543 aa18.99■□□□□ 0.63
PHRF1-201ENST00000264555 VWA3AA6NCI4 1184 aa18.99■□□□□ 0.63
PHRF1-201ENST00000264555 CD2BP2O95400 341 aaKnown RBP18.99■□□□□ 0.63
PHRF1-201ENST00000264555 CCDC175P0C221 793 aa18.99■□□□□ 0.63
PHRF1-201ENST00000264555 OGFOD1Q8N543 542 aa18.99■□□□□ 0.63
PHRF1-201ENST00000264555 WDR17Q8IZU2 1322 aa18.98■□□□□ 0.63
PHRF1-201ENST00000264555 PPRC1Q5VV67 1664 aaKnown RBP18.98■□□□□ 0.63
PHRF1-201ENST00000264555 BICDL2A1A5D9 508 aa18.98■□□□□ 0.63
PHRF1-201ENST00000264555 UFL1O94874 794 aa18.98■□□□□ 0.63
PHRF1-201ENST00000264555 STX17P56962 302 aa18.98■□□□□ 0.63
PHRF1-201ENST00000264555 PHKBQ93100 1093 aa18.98■□□□□ 0.63
PHRF1-201ENST00000264555 TLR7Q9NYK1 1049 aaKnown RBP18.98■□□□□ 0.63
PHRF1-201ENST00000264555 RIMBP2O15034 1052 aa18.98■□□□□ 0.63
PHRF1-201ENST00000264555 PRDM1O75626 825 aa18.98■□□□□ 0.63
PHRF1-201ENST00000264555 FAM98CQ17RN3 349 aaKnown RBP18.98■□□□□ 0.63
PHRF1-201ENST00000264555 SRRTQ9BXP5 876 aaKnown RBP18.98■□□□□ 0.63
PHRF1-201ENST00000264555 INO80Q9ULG1 1556 aaPredicted RBP18.97■□□□□ 0.63
PHRF1-201ENST00000264555 ZNF202O95125 648 aa18.97■□□□□ 0.63
PHRF1-201ENST00000264555 CETN2P41208 172 aa18.97■□□□□ 0.63
PHRF1-201ENST00000264555 TNNI2P48788 182 aa18.97■□□□□ 0.63
PHRF1-201ENST00000264555 MYL10Q9BUA6 226 aa18.97■□□□□ 0.63
PHRF1-201ENST00000264555 CDC42BPGQ6DT37 1551 aa18.97■□□□□ 0.63
PHRF1-201ENST00000264555 BMS1Q14692 1282 aaKnown RBP18.97■□□□□ 0.63
PHRF1-201ENST00000264555 SYCP3Q8IZU3 236 aa18.97■□□□□ 0.63
PHRF1-201ENST00000264555 TSPYL1Q9H0U9 437 aa18.97■□□□□ 0.63
PHRF1-201ENST00000264555 AATFQ9NY61 560 aaKnown RBP eCLIP18.97■□□□□ 0.634e-7■■■■■ 34.9
PHRF1-201ENST00000264555 NCAPD2Q15021 1401 aa18.97■□□□□ 0.63
PHRF1-201ENST00000264555 SMARCC2Q8TAQ2 1214 aa18.96■□□□□ 0.63
PHRF1-201ENST00000264555 CAMSAP1Q5T5Y3 1602 aa18.96■□□□□ 0.63
PHRF1-201ENST00000264555 JADE2Q9NQC1 790 aa18.96■□□□□ 0.63
PHRF1-201ENST00000264555 GGA1Q9UJY5 639 aa18.96■□□□□ 0.63
PHRF1-201ENST00000264555 ADCY9O60503 1353 aa18.96■□□□□ 0.63
PHRF1-201ENST00000264555 NAA15Q9BXJ9 866 aaKnown RBP18.96■□□□□ 0.63
PHRF1-201ENST00000264555 SAMM50Q9Y512 469 aa18.96■□□□□ 0.63
PHRF1-201ENST00000264555 ADGRL3Q9HAR2 1447 aa18.96■□□□□ 0.63
PHRF1-201ENST00000264555 PDE6AP16499 860 aa18.96■□□□□ 0.63
PHRF1-201ENST00000264555 CUL4AQ13619 759 aa18.96■□□□□ 0.63
PHRF1-201ENST00000264555 ADCK5Q3MIX3 580 aa18.96■□□□□ 0.63
PHRF1-201ENST00000264555 SLU7O95391 586 aaKnown RBP18.96■□□□□ 0.63
PHRF1-201ENST00000264555 DNA2P51530 1060 aa18.96■□□□□ 0.63
PHRF1-201ENST00000264555 GIGYF2Q6Y7W6 1299 aaKnown RBP18.96■□□□□ 0.63
PHRF1-201ENST00000264555 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.96■□□□□ 0.631e-6■■■■■ 66.2
PHRF1-201ENST00000264555 SAP30BPQ9UHR5 308 aaKnown RBP18.96■□□□□ 0.63
PHRF1-201ENST00000264555 KIAA0754O94854 1291 aa18.95■□□□□ 0.62
PHRF1-201ENST00000264555 PLCD1P51178 756 aa18.95■□□□□ 0.62
PHRF1-201ENST00000264555 ATG3Q9NT62 314 aa18.95■□□□□ 0.62
PHRF1-201ENST00000264555 ZNF75DP51815 510 aa18.95■□□□□ 0.62
PHRF1-201ENST00000264555 FGAP02671 866 aa18.95■□□□□ 0.62
PHRF1-201ENST00000264555 RRAGDQ9NQL2 400 aaPredicted RBP18.95■□□□□ 0.62
PHRF1-201ENST00000264555 SPDYE3A6NKU9 549 aa18.95■□□□□ 0.62
PHRF1-201ENST00000264555 SSR1P43307 286 aaKnown RBP18.94■□□□□ 0.62
PHRF1-201ENST00000264555 RPS8P62241 208 aaKnown RBP18.94■□□□□ 0.62
PHRF1-201ENST00000264555 ZMYM1Q5SVZ6 1142 aa18.94■□□□□ 0.62
PHRF1-201ENST00000264555 LRRC7Q96NW7 1537 aa18.94■□□□□ 0.62
PHRF1-201ENST00000264555 PIK3AP1Q6ZUJ8 805 aa18.94■□□□□ 0.62
PHRF1-201ENST00000264555 GPT2Q8TD30 523 aa18.94■□□□□ 0.62
PHRF1-201ENST00000264555 NAP1L4Q99733 375 aaKnown RBP18.94■□□□□ 0.62
PHRF1-201ENST00000264555 NLRP12P59046 1061 aa18.94■□□□□ 0.62
PHRF1-201ENST00000264555 PPARAQ07869 468 aa18.94■□□□□ 0.62
PHRF1-201ENST00000264555 MYSM1Q5VVJ2 828 aa18.94■□□□□ 0.62
PHRF1-201ENST00000264555 IFNL3Q8IZI9 196 aa18.94■□□□□ 0.62
PHRF1-201ENST00000264555 ASAP1Q9ULH1 1129 aa18.94■□□□□ 0.62
PHRF1-201ENST00000264555 UBXN1Q04323 297 aa18.94■□□□□ 0.62
PHRF1-201ENST00000264555 PDE8BO95263 885 aa18.93■□□□□ 0.62
PHRF1-201ENST00000264555 DESP17661 470 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 408.1 ms