RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 U2AF2P26368 475 aaKnown RBP eCLIP19.41■□□□□ 0.7
PDE4C-201ENST00000262805 METAP2P50579 478 aaKnown RBP eCLIP19.41■□□□□ 0.7
PDE4C-201ENST00000262805 CEP135Q66GS9 1140 aa19.41■□□□□ 0.7
PDE4C-201ENST00000262805 CCDC102BQ68D86 513 aa19.41■□□□□ 0.7
PDE4C-201ENST00000262805 APOA5Q6Q788 366 aa19.41■□□□□ 0.7
PDE4C-201ENST00000262805 XPO4Q9C0E2 1151 aaKnown RBP19.41■□□□□ 0.7
PDE4C-201ENST00000262805 WDR19Q8NEZ3 1342 aa19.41■□□□□ 0.7
PDE4C-201ENST00000262805 SPDYE4A6NLX3 237 aa19.41■□□□□ 0.7
PDE4C-201ENST00000262805 STARD3NLO95772 234 aa19.41■□□□□ 0.7
PDE4C-201ENST00000262805 PDE6AP16499 860 aa19.41■□□□□ 0.7
PDE4C-201ENST00000262805 TRDNQ13061 729 aa19.41■□□□□ 0.7
PDE4C-201ENST00000262805 VPS37DQ86XT2 251 aa19.41■□□□□ 0.7
PDE4C-201ENST00000262805 ZBTB1Q9Y2K1 713 aa19.41■□□□□ 0.7
PDE4C-201ENST00000262805 TACC3Q9Y6A5 838 aa19.41■□□□□ 0.7
PDE4C-201ENST00000262805 NCAPHQ15003 741 aa19.4■□□□□ 0.7
PDE4C-201ENST00000262805 KRT40Q6A162 431 aa19.4■□□□□ 0.7
PDE4C-201ENST00000262805 NYAP1Q6ZVC0 841 aa19.4■□□□□ 0.7
PDE4C-201ENST00000262805 IFNKQ9P0W0 207 aa19.4■□□□□ 0.7
PDE4C-201ENST00000262805 ATRNO75882 1429 aa19.4■□□□□ 0.7
PDE4C-201ENST00000262805 TCRBV5S4A2TA0A5A2 114 aa19.4■□□□□ 0.7
PDE4C-201ENST00000262805 RANBP6O60518 1105 aaKnown RBP19.4■□□□□ 0.7
PDE4C-201ENST00000262805 PDE8BO95263 885 aa19.4■□□□□ 0.7
PDE4C-201ENST00000262805 SLC39A14Q15043 492 aa19.4■□□□□ 0.7
PDE4C-201ENST00000262805 TRMT112Q9UI30 125 aaKnown RBP19.4■□□□□ 0.7
PDE4C-201ENST00000262805 NEMFO60524 1076 aa19.39■□□□□ 0.69
PDE4C-201ENST00000262805 SMC2O95347 1197 aa19.39■□□□□ 0.69
PDE4C-201ENST00000262805 CMA1P23946 247 aa19.39■□□□□ 0.69
PDE4C-201ENST00000262805 CCDC112Q8NEF3 446 aa19.39■□□□□ 0.69
PDE4C-201ENST00000262805 SHC4Q6S5L8 630 aa19.39■□□□□ 0.69
PDE4C-201ENST00000262805 IGDCC4Q8TDY8 1250 aa19.39■□□□□ 0.69
PDE4C-201ENST00000262805 TEX13AQ9BXU3 409 aaPredicted RBP19.39■□□□□ 0.69
PDE4C-201ENST00000262805 EPB41L4AQ9HCS5 686 aaPredicted RBP19.39■□□□□ 0.69
PDE4C-201ENST00000262805 FAM217BQ9NTX9 383 aaPredicted RBP19.39■□□□□ 0.69
PDE4C-201ENST00000262805 PAXBP1Q9Y5B6 917 aa19.39■□□□□ 0.69
PDE4C-201ENST00000262805 NUP98P52948 1817 aa19.38■□□□□ 0.69
PDE4C-201ENST00000262805 CYP19A1P11511 503 aaPredicted RBP19.38■□□□□ 0.69
PDE4C-201ENST00000262805 NLRP12P59046 1061 aa19.38■□□□□ 0.69
PDE4C-201ENST00000262805 UBE3CQ15386 1083 aa19.38■□□□□ 0.69
PDE4C-201ENST00000262805 ZRSR1Q15695 479 aaKnown RBP19.38■□□□□ 0.69
PDE4C-201ENST00000262805 NTRK3Q16288 839 aa19.38■□□□□ 0.69
PDE4C-201ENST00000262805 CCAR2Q8N163 923 aaKnown RBP19.38■□□□□ 0.69
PDE4C-201ENST00000262805 ZNF512BQ96KM6 892 aaPredicted RBP19.38■□□□□ 0.69
PDE4C-201ENST00000262805 CLIC6Q96NY7 704 aa19.38■□□□□ 0.69
PDE4C-201ENST00000262805 TBC1D2BQ9UPU7 963 aa19.38■□□□□ 0.69
PDE4C-201ENST00000262805 ROBO1Q9Y6N7 1651 aa19.38■□□□□ 0.69
PDE4C-201ENST00000262805 UBN2Q6ZU65 1347 aa19.38■□□□□ 0.69
PDE4C-201ENST00000262805 ANKRD36CQ5JPF3 1778 aa19.38■□□□□ 0.69
PDE4C-201ENST00000262805 CTDSPL2Q05D32 466 aa19.37■□□□□ 0.69
PDE4C-201ENST00000262805 PTPAQ15257 358 aa19.37■□□□□ 0.69
PDE4C-201ENST00000262805 ARMCX5Q6P1M9 558 aa19.37■□□□□ 0.69
PDE4C-201ENST00000262805 STRBPQ96SI9 672 aaKnown RBP19.37■□□□□ 0.69
PDE4C-201ENST00000262805 BPIFA3Q9BQP9 254 aa19.37■□□□□ 0.69
PDE4C-201ENST00000262805 HSD3B7Q9H2F3 369 aa19.37■□□□□ 0.69
PDE4C-201ENST00000262805 LY9Q9HBG7 655 aa19.37■□□□□ 0.69
PDE4C-201ENST00000262805 LMOD1P29536 600 aaPredicted RBP19.37■□□□□ 0.69
PDE4C-201ENST00000262805 PTPN14Q15678 1187 aa19.37■□□□□ 0.69
PDE4C-201ENST00000262805 TMC6Q7Z403 805 aa19.37■□□□□ 0.69
PDE4C-201ENST00000262805 OSBPL5Q9H0X9 879 aaPredicted RBP19.37■□□□□ 0.69
PDE4C-201ENST00000262805 LRP6O75581 1613 aa19.37■□□□□ 0.69
PDE4C-201ENST00000262805 NHSL1Q5SYE7 1610 aa19.37■□□□□ 0.69
PDE4C-201ENST00000262805 ATP1A3P13637 1013 aa19.36■□□□□ 0.69
PDE4C-201ENST00000262805 ARID4AP29374 1257 aaPredicted RBP19.36■□□□□ 0.69
PDE4C-201ENST00000262805 TTF1Q15361 905 aaPredicted RBP19.36■□□□□ 0.69
PDE4C-201ENST00000262805 SMAP1Q8IYB5 467 aaPredicted RBP19.36■□□□□ 0.69
PDE4C-201ENST00000262805 MAP3K14Q99558 947 aa19.36■□□□□ 0.69
PDE4C-201ENST00000262805 SLIT2O94813 1529 aa19.36■□□□□ 0.69
PDE4C-201ENST00000262805 UBAP1LF5GYI3 381 aa19.36■□□□□ 0.69
PDE4C-201ENST00000262805 SYTL4Q96C24 671 aaPredicted RBP19.36■□□□□ 0.69
PDE4C-201ENST00000262805 SYKP43405 635 aa19.35■□□□□ 0.69
PDE4C-201ENST00000262805 PNOCQ13519 176 aa19.35■□□□□ 0.69
PDE4C-201ENST00000262805 NFXL1Q6ZNB6 911 aa19.35■□□□□ 0.69
PDE4C-201ENST00000262805 AIDAQ96BJ3 306 aa19.35■□□□□ 0.69
PDE4C-201ENST00000262805 HPSEQ9Y251 543 aa19.35■□□□□ 0.69
PDE4C-201ENST00000262805 ZBTB43O43298 467 aa19.35■□□□□ 0.69
PDE4C-201ENST00000262805 ZSWIM5Q9P217 1185 aa19.35■□□□□ 0.69
PDE4C-201ENST00000262805 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.35■□□□□ 0.69
PDE4C-201ENST00000262805 V9GYY5 206 aaPredicted RBP19.35■□□□□ 0.69
PDE4C-201ENST00000262805 CHD4Q14839 1912 aa19.35■□□□□ 0.69
PDE4C-201ENST00000262805 PDE8AO60658 829 aa19.34■□□□□ 0.69
PDE4C-201ENST00000262805 TMEM67Q5HYA8 995 aa19.34■□□□□ 0.69
PDE4C-201ENST00000262805 E4F1Q66K89 784 aaPredicted RBP19.34■□□□□ 0.69
PDE4C-201ENST00000262805 ARMT1Q9H993 441 aa19.34■□□□□ 0.69
PDE4C-201ENST00000262805 GOLGA8AA7E2F4 631 aa19.34■□□□□ 0.69
PDE4C-201ENST00000262805 PRKAB2O43741 272 aa19.34■□□□□ 0.69
PDE4C-201ENST00000262805 MBD4O95243 580 aa19.34■□□□□ 0.69
PDE4C-201ENST00000262805 FGFR2P21802 821 aa19.34■□□□□ 0.69
PDE4C-201ENST00000262805 GUCY1A2P33402 732 aa19.34■□□□□ 0.69
PDE4C-201ENST00000262805 GSDMDP57764 484 aa19.34■□□□□ 0.69
PDE4C-201ENST00000262805 GNL2Q13823 731 aaKnown RBP19.34■□□□□ 0.69
PDE4C-201ENST00000262805 RASGRF1Q13972 1273 aa19.34■□□□□ 0.69
PDE4C-201ENST00000262805 PTPN21Q16825 1174 aa19.34■□□□□ 0.69
PDE4C-201ENST00000262805 STK11IPQ8N1F8 1099 aa19.34■□□□□ 0.69
PDE4C-201ENST00000262805 MAGEB6Q8N7X4 407 aa19.34■□□□□ 0.69
PDE4C-201ENST00000262805 ZNF215Q9UL58 517 aaPredicted RBP19.34■□□□□ 0.69
PDE4C-201ENST00000262805 IARSP41252 1262 aaKnown RBP19.33■□□□□ 0.69
PDE4C-201ENST00000262805 IFNL3Q8IZI9 196 aa19.33■□□□□ 0.69
PDE4C-201ENST00000262805 DPF2Q92785 391 aa19.33■□□□□ 0.69
PDE4C-201ENST00000262805 PKNOX2Q96KN3 472 aa19.33■□□□□ 0.69
PDE4C-201ENST00000262805 BTG4Q9NY30 223 aa19.33■□□□□ 0.69
PDE4C-201ENST00000262805 PRDM4Q9UKN5 801 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms