RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 C16orf45Q96MC5 204 aaPredicted RBP17.87■□□□□ 0.45
SHANK3-201ENST00000262795 RIOK1Q9BRS2 568 aaKnown RBP17.87■□□□□ 0.45
SHANK3-201ENST00000262795 AKR1B10O60218 316 aa17.86■□□□□ 0.45
SHANK3-201ENST00000262795 RAD17O75943 681 aa17.86■□□□□ 0.45
SHANK3-201ENST00000262795 ZFYP08048 801 aaPredicted RBP17.86■□□□□ 0.45
SHANK3-201ENST00000262795 SSFA2P28290 1259 aa17.86■□□□□ 0.45
SHANK3-201ENST00000262795 CCDC102BQ68D86 513 aa17.86■□□□□ 0.45
SHANK3-201ENST00000262795 KLHDC4Q8TBB5 520 aa17.86■□□□□ 0.45
SHANK3-201ENST00000262795 FRMD4BQ9Y2L6 1034 aa17.86■□□□□ 0.45
SHANK3-201ENST00000262795 STX17P56962 302 aa17.86■□□□□ 0.45
SHANK3-201ENST00000262795 IGSF3O75054 1194 aa17.86■□□□□ 0.45
SHANK3-201ENST00000262795 ZWINTO95229 277 aa17.86■□□□□ 0.45
SHANK3-201ENST00000262795 MAST3O60307 1309 aa17.86■□□□□ 0.45
SHANK3-201ENST00000262795 FTOQ9C0B1 505 aaKnown RBP eCLIP17.86■□□□□ 0.45
SHANK3-201ENST00000262795 GNAT2P19087 354 aa17.86■□□□□ 0.45
SHANK3-201ENST00000262795 CTDSPL2Q05D32 466 aa17.86■□□□□ 0.45
SHANK3-201ENST00000262795 CCT6BQ92526 530 aa17.86■□□□□ 0.45
SHANK3-201ENST00000262795 RMND1Q9NWS8 449 aa17.85■□□□□ 0.45
SHANK3-201ENST00000262795 RBM8AQ9Y5S9 174 aaKnown RBP17.85■□□□□ 0.45
SHANK3-201ENST00000262795 DHX29Q7Z478 1369 aaKnown RBP17.85■□□□□ 0.45
SHANK3-201ENST00000262795 PTPN23Q9H3S7 1636 aa17.85■□□□□ 0.45
SHANK3-201ENST00000262795 STX10O60499 249 aa17.85■□□□□ 0.45
SHANK3-201ENST00000262795 CUL4BQ13620 913 aa17.85■□□□□ 0.45
SHANK3-201ENST00000262795 RNF113AO15541 343 aaKnown RBP17.85■□□□□ 0.45
SHANK3-201ENST00000262795 TNPO1Q92973 898 aaKnown RBP17.85■□□□□ 0.45
SHANK3-201ENST00000262795 FAM107BQ9H098 131 aa17.85■□□□□ 0.45
SHANK3-201ENST00000262795 ARMC9Q7Z3E5 817 aa17.85■□□□□ 0.45
SHANK3-201ENST00000262795 ARHGEF35A5YM69 484 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 B4E1Z4 1266 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 PDE8AO60658 829 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 CDAN1Q8IWY9 1227 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 C8orf58Q8NAV2 365 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.84■□□□□ 0.45
SHANK3-201ENST00000262795 SMC1BQ8NDV3 1235 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 DBNDD1Q9H9R9 158 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 GNA11P29992 359 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 FAM47AQ5JRC9 791 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 MFSD14BQ5SR56 506 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 PRDM5Q9NQX1 630 aaPredicted RBP17.84■□□□□ 0.45
SHANK3-201ENST00000262795 NOC2LQ9Y3T9 749 aaKnown RBP17.84■□□□□ 0.45
SHANK3-201ENST00000262795 OATP04181 439 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 DTHD1Q6ZMT9 781 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 HACE1Q8IYU2 909 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 GANCQ8TET4 914 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 EYA1Q99502 592 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 SCAND2PQ9GZW5 306 aaPredicted RBP17.84■□□□□ 0.45
SHANK3-201ENST00000262795 SUGCTQ9HAC7 445 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 SH3TC1Q8TE82 1336 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 RNASELQ05823 741 aaKnown RBP17.84■□□□□ 0.45
SHANK3-201ENST00000262795 ITKQ08881 620 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 CCDC25Q86WR0 208 aa17.84■□□□□ 0.45
SHANK3-201ENST00000262795 hCG_1642624A0A1W2PR95 340 aa17.83■□□□□ 0.45
SHANK3-201ENST00000262795 XRCC6P12956 609 aaKnown RBP eCLIP17.83■□□□□ 0.45
SHANK3-201ENST00000262795 TXKP42681 527 aa17.83■□□□□ 0.45
SHANK3-201ENST00000262795 PDE4DQ08499 809 aa17.83■□□□□ 0.45
SHANK3-201ENST00000262795 PUM3Q15397 648 aaKnown RBP17.83■□□□□ 0.45
SHANK3-201ENST00000262795 NDUFB9Q9Y6M9 179 aa17.83■□□□□ 0.44
SHANK3-201ENST00000262795 SYNJ2BP-COX16A0A087WUM0 186 aa17.83■□□□□ 0.44
SHANK3-201ENST00000262795 COX16Q9P0S2 106 aa17.83■□□□□ 0.44
SHANK3-201ENST00000262795 YTHDC2Q9H6S0 1430 aaKnown RBP17.83■□□□□ 0.44
SHANK3-201ENST00000262795 ERCC5P28715 1186 aaPredicted RBP17.82■□□□□ 0.44
SHANK3-201ENST00000262795 EEPD1Q7L9B9 569 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 CD2APQ9Y5K6 639 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 UBN2Q6ZU65 1347 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 ZSCAN12O43309 604 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 ERFEQ4G0M1 354 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 USP25Q9UHP3 1055 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 MAP3K5Q99683 1374 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 VWA3AA6NCI4 1184 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 TNFAIP1Q13829 316 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 TEKT1Q969V4 418 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 USTQ9Y2C2 406 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 NCOA1Q15788 1441 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 ZBBXA8MT70 800 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 OSBPP22059 807 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 DALRD3Q5D0E6 543 aaKnown RBP17.82■□□□□ 0.44
SHANK3-201ENST00000262795 MMS19Q96T76 1030 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 AP5M1Q9H0R1 490 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 FLOT1O75955 427 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 FAM102BQ5T8I3 360 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 RYBPQ8N488 228 aaPredicted RBP17.82■□□□□ 0.44
SHANK3-201ENST00000262795 PARD3BQ8TEW8 1205 aa17.82■□□□□ 0.44
SHANK3-201ENST00000262795 PCF11O94913 1555 aaKnown RBP17.81■□□□□ 0.44
SHANK3-201ENST00000262795 UBXN4Q92575 508 aa17.81■□□□□ 0.44
SHANK3-201ENST00000262795 SEPT14Q6ZU15 432 aa17.81■□□□□ 0.44
SHANK3-201ENST00000262795 USPL1Q5W0Q7 1092 aa17.81■□□□□ 0.44
SHANK3-201ENST00000262795 PPEF1O14829 653 aaPredicted RBP17.81■□□□□ 0.44
SHANK3-201ENST00000262795 PARP10Q53GL7 1025 aa17.81■□□□□ 0.44
SHANK3-201ENST00000262795 ABCC1P33527 1531 aa17.81■□□□□ 0.44
SHANK3-201ENST00000262795 PABPC4Q13310 644 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHANK3-201ENST00000262795 CCDC183Q5T5S1 534 aa17.81■□□□□ 0.44
SHANK3-201ENST00000262795 KANK3Q6NY19 840 aa17.81■□□□□ 0.44
SHANK3-201ENST00000262795 WDR66Q8TBY9 1149 aa17.81■□□□□ 0.44
SHANK3-201ENST00000262795 TIGD1Q96MW7 591 aa17.81■□□□□ 0.44
SHANK3-201ENST00000262795 CARD10Q9BWT7 1032 aa17.81■□□□□ 0.44
SHANK3-201ENST00000262795 SHTN1A0MZ66 631 aa17.8■□□□□ 0.44
SHANK3-201ENST00000262795 PTPN14Q15678 1187 aa17.8■□□□□ 0.44
SHANK3-201ENST00000262795 PPP4R4Q6NUP7 873 aa17.8■□□□□ 0.44
SHANK3-201ENST00000262795 NSMCE1Q8WV22 266 aa17.8■□□□□ 0.44
SHANK3-201ENST00000262795 ATP6V0A2Q9Y487 856 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms