RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 FBXL16Q8N461 479 aa26.4■■□□□ 1.82
SIX3-201ENST00000260653 CHAMP1Q96JM3 812 aa26.4■■□□□ 1.82
SIX3-201ENST00000260653 TACC3Q9Y6A5 838 aa26.4■■□□□ 1.82
SIX3-201ENST00000260653 GOLGB1Q14789 3259 aaKnown RBP26.4■■□□□ 1.82
SIX3-201ENST00000260653 SCRN1Q12765 414 aa26.4■■□□□ 1.82
SIX3-201ENST00000260653 BAZ2AQ9UIF9 1905 aaKnown RBP26.39■■□□□ 1.82
SIX3-201ENST00000260653 WDR33Q9C0J8 1336 aaKnown RBP26.39■■□□□ 1.82
SIX3-201ENST00000260653 B4E1Z4 1266 aa26.39■■□□□ 1.82
SIX3-201ENST00000260653 MPNDQ8N594 471 aa26.39■■□□□ 1.82
SIX3-201ENST00000260653 H0YIN7 160 aa26.39■■□□□ 1.81
SIX3-201ENST00000260653 CYB5R4Q7L1T6 521 aa26.39■■□□□ 1.81
SIX3-201ENST00000260653 RIMBP2O15034 1052 aa26.38■■□□□ 1.81
SIX3-201ENST00000260653 STX6O43752 255 aa26.38■■□□□ 1.81
SIX3-201ENST00000260653 PFKFB2O60825 505 aa26.38■■□□□ 1.81
SIX3-201ENST00000260653 NAP1L2Q9ULW6 460 aaPredicted RBP26.38■■□□□ 1.81
SIX3-201ENST00000260653 KIAA1551Q9HCM1 1747 aa26.38■■□□□ 1.81
SIX3-201ENST00000260653 CHRNA5P30532 468 aa26.38■■□□□ 1.81
SIX3-201ENST00000260653 WDR19Q8NEZ3 1342 aa26.37■■□□□ 1.81
SIX3-201ENST00000260653 AKNAD1Q5T1N1 836 aa26.37■■□□□ 1.81
SIX3-201ENST00000260653 DPP8Q6V1X1 898 aaPredicted RBP26.37■■□□□ 1.81
SIX3-201ENST00000260653 MCTP1Q6DN14 999 aa26.37■■□□□ 1.81
SIX3-201ENST00000260653 JAK2O60674 1132 aa26.36■■□□□ 1.81
SIX3-201ENST00000260653 PDIA3P30101 505 aaKnown RBP26.36■■□□□ 1.81
SIX3-201ENST00000260653 DIXDC1Q155Q3 683 aa26.36■■□□□ 1.81
SIX3-201ENST00000260653 TMED8Q6PL24 325 aaPredicted RBP26.36■■□□□ 1.81
SIX3-201ENST00000260653 STK11IPQ8N1F8 1099 aa26.36■■□□□ 1.81
SIX3-201ENST00000260653 CCT2P78371 535 aaKnown RBP26.36■■□□□ 1.81
SIX3-201ENST00000260653 PPARAQ07869 468 aa26.36■■□□□ 1.81
SIX3-201ENST00000260653 STYK1Q6J9G0 422 aa26.36■■□□□ 1.81
SIX3-201ENST00000260653 SLX4Q8IY92 1834 aa26.36■■□□□ 1.81
SIX3-201ENST00000260653 SMIM22K7EJ46 135 aa26.35■■□□□ 1.81
SIX3-201ENST00000260653 EVCP57679 992 aa26.35■■□□□ 1.81
SIX3-201ENST00000260653 MFSD6Q6ZSS7 791 aa26.35■■□□□ 1.81
SIX3-201ENST00000260653 STAG1Q8WVM7 1258 aa26.35■■□□□ 1.81
SIX3-201ENST00000260653 ZNF274Q96GC6 653 aaPredicted RBP26.35■■□□□ 1.81
SIX3-201ENST00000260653 MINDY4BA8MYZ0 360 aa26.35■■□□□ 1.81
SIX3-201ENST00000260653 TMX4Q9H1E5 349 aaPredicted RBP26.35■■□□□ 1.81
SIX3-201ENST00000260653 NCOA5Q9HCD5 579 aaKnown RBP26.35■■□□□ 1.81
SIX3-201ENST00000260653 BRPF3Q9ULD4 1205 aa26.35■■□□□ 1.81
SIX3-201ENST00000260653 GOLGA6L22H0YM25 854 aa26.34■■□□□ 1.81
SIX3-201ENST00000260653 ZSCAN22P10073 491 aaPredicted RBP26.34■■□□□ 1.81
SIX3-201ENST00000260653 CRNKL1Q9BZJ0 848 aaKnown RBP26.34■■□□□ 1.81
SIX3-201ENST00000260653 TRAK2O60296 914 aa26.34■■□□□ 1.81
SIX3-201ENST00000260653 MYH2Q9UKX2 1941 aa26.33■■□□□ 1.81
SIX3-201ENST00000260653 KDM4AO75164 1064 aa26.33■■□□□ 1.81
SIX3-201ENST00000260653 MFSD14BQ5SR56 506 aa26.33■■□□□ 1.81
SIX3-201ENST00000260653 ZC3H12CQ9C0D7 883 aaKnown RBP26.33■■□□□ 1.81
SIX3-201ENST00000260653 CNNM2Q9H8M5 875 aa26.33■■□□□ 1.81
SIX3-201ENST00000260653 CYP2D7A0A087X1C5 515 aa26.33■■□□□ 1.81
SIX3-201ENST00000260653 KLF18A0A0U1RQI7 1052 aa26.33■■□□□ 1.81
SIX3-201ENST00000260653 COA1Q9GZY4 146 aa26.33■■□□□ 1.81
SIX3-201ENST00000260653 MTMR6Q9Y217 621 aa26.33■■□□□ 1.81
SIX3-201ENST00000260653 IGSF3O75054 1194 aa26.32■■□□□ 1.8
SIX3-201ENST00000260653 FOXD4L6Q3SYB3 417 aaPredicted RBP26.32■■□□□ 1.8
SIX3-201ENST00000260653 RRP12Q5JTH9 1297 aaKnown RBP26.32■■□□□ 1.8
SIX3-201ENST00000260653 FOXD4L3Q6VB84 417 aaPredicted RBP26.32■■□□□ 1.8
SIX3-201ENST00000260653 TOMM22Q9NS69 142 aa26.32■■□□□ 1.8
SIX3-201ENST00000260653 ZSWIM5Q9P217 1185 aa26.32■■□□□ 1.8
SIX3-201ENST00000260653 ANGEL1Q9UNK9 670 aaKnown RBP26.32■■□□□ 1.8
SIX3-201ENST00000260653 LARP1BQ659C4 914 aaKnown RBP26.32■■□□□ 1.8
SIX3-201ENST00000260653 GIMAP6Q6P9H5 292 aa26.32■■□□□ 1.8
SIX3-201ENST00000260653 KRT23Q9C075 422 aa26.32■■□□□ 1.8
SIX3-201ENST00000260653 ZNF219Q9P2Y4 722 aaPredicted RBP26.32■■□□□ 1.8
SIX3-201ENST00000260653 ANAPC4Q9UJX5 808 aa26.32■■□□□ 1.8
SIX3-201ENST00000260653 SH2B2O14492 632 aaPredicted RBP26.31■■□□□ 1.8
SIX3-201ENST00000260653 CTDNEP1O95476 244 aa26.31■■□□□ 1.8
SIX3-201ENST00000260653 GSTO1P78417 241 aa26.31■■□□□ 1.8
SIX3-201ENST00000260653 NSUN7Q8NE18 718 aaKnown RBP26.31■■□□□ 1.8
SIX3-201ENST00000260653 DCP1AQ9NPI6 582 aaPredicted RBP26.31■■□□□ 1.8
SIX3-201ENST00000260653 VPS37CA5D8V6 355 aaPredicted RBP26.31■■□□□ 1.8
SIX3-201ENST00000260653 GTF2IP78347 998 aa26.31■■□□□ 1.8
SIX3-201ENST00000260653 CTR9Q6PD62 1173 aa26.31■■□□□ 1.8
SIX3-201ENST00000260653 DDX11Q96FC9 970 aa26.31■■□□□ 1.8
SIX3-201ENST00000260653 GOLGA8BA8MQT2 603 aa26.3■■□□□ 1.8
SIX3-201ENST00000260653 RAB11FIP4Q86YS3 637 aa26.3■■□□□ 1.8
SIX3-201ENST00000260653 LLPHQ9BRT6 129 aaKnown RBP26.3■■□□□ 1.8
SIX3-201ENST00000260653 SENP2Q9HC62 589 aa26.3■■□□□ 1.8
SIX3-201ENST00000260653 HPS5Q9UPZ3 1129 aa26.3■■□□□ 1.8
SIX3-201ENST00000260653 FAM205AQ6ZU69 1335 aa26.3■■□□□ 1.8
SIX3-201ENST00000260653 USP17L12C9JPN9 530 aa26.3■■□□□ 1.8
SIX3-201ENST00000260653 USP17L21D6R901 530 aa26.3■■□□□ 1.8
SIX3-201ENST00000260653 DOK7Q18PE1 504 aa26.3■■□□□ 1.8
SIX3-201ENST00000260653 SMARCC2Q8TAQ2 1214 aa26.3■■□□□ 1.8
SIX3-201ENST00000260653 RNF41Q9H4P4 317 aaPredicted RBP26.3■■□□□ 1.8
SIX3-201ENST00000260653 F13A1P00488 732 aa26.29■■□□□ 1.8
SIX3-201ENST00000260653 IGDCC4Q8TDY8 1250 aa26.29■■□□□ 1.8
SIX3-201ENST00000260653 TBC1D22AQ8WUA7 517 aa26.29■■□□□ 1.8
SIX3-201ENST00000260653 TMEM87BQ96K49 555 aa26.29■■□□□ 1.8
SIX3-201ENST00000260653 MROH7-TTC4A0A0A0MT08 1334 aa26.29■■□□□ 1.8
SIX3-201ENST00000260653 PDCP20941 246 aa26.29■■□□□ 1.8
SIX3-201ENST00000260653 EVX2Q03828 476 aa26.29■■□□□ 1.8
SIX3-201ENST00000260653 SH3RF3Q8TEJ3 882 aaPredicted RBP26.29■■□□□ 1.8
SIX3-201ENST00000260653 CNKSR1Q969H4 720 aa26.29■■□□□ 1.8
SIX3-201ENST00000260653 ATP8A2Q9NTI2 1148 aa26.29■■□□□ 1.8
SIX3-201ENST00000260653 PTMSP20962 102 aa26.28■■□□□ 1.8
SIX3-201ENST00000260653 C10orf71Q711Q0 1435 aa26.28■■□□□ 1.8
SIX3-201ENST00000260653 PTPDC1A2A3K4 754 aa26.28■■□□□ 1.8
SIX3-201ENST00000260653 FBXW7Q969H0 707 aa26.28■■□□□ 1.8
SIX3-201ENST00000260653 RTFDC1Q9BY42 306 aaPredicted RBP26.28■■□□□ 1.8
SIX3-201ENST00000260653 LY9Q9HBG7 655 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms