RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 ZFYVE9O95405 1425 aa17.12■□□□□ 0.33
HOXC12-201ENST00000243103 MEX3CQ5U5Q3 659 aaKnown RBP17.12■□□□□ 0.33
HOXC12-201ENST00000243103 SARM1Q6SZW1 724 aa17.12■□□□□ 0.33
HOXC12-201ENST00000243103 ZNF396Q96N95 335 aaPredicted RBP17.12■□□□□ 0.33
HOXC12-201ENST00000243103 AIFM3Q96NN9 605 aa17.12■□□□□ 0.33
HOXC12-201ENST00000243103 CTAGE15A4D2H0 777 aa17.12■□□□□ 0.33
HOXC12-201ENST00000243103 CTAGE8P0CG41 777 aa17.12■□□□□ 0.33
HOXC12-201ENST00000243103 NF2P35240 595 aa17.12■□□□□ 0.33
HOXC12-201ENST00000243103 CCT6AP40227 531 aaKnown RBP17.12■□□□□ 0.33
HOXC12-201ENST00000243103 GNGT1P63211 74 aa17.12■□□□□ 0.33
HOXC12-201ENST00000243103 NECTIN1Q15223 517 aa17.12■□□□□ 0.33
HOXC12-201ENST00000243103 WASHC4Q2M389 1173 aa17.12■□□□□ 0.33
HOXC12-201ENST00000243103 CTAGE6Q86UF2 777 aa17.12■□□□□ 0.33
HOXC12-201ENST00000243103 CTAGE4Q8IX94 777 aa17.12■□□□□ 0.33
HOXC12-201ENST00000243103 HGSO14964 777 aaPredicted RBP17.11■□□□□ 0.33
HOXC12-201ENST00000243103 SLC4A8Q2Y0W8 1093 aa17.11■□□□□ 0.33
HOXC12-201ENST00000243103 RABGGTAQ92696 567 aa17.11■□□□□ 0.33
HOXC12-201ENST00000243103 TBC1D31Q96DN5 1066 aa17.11■□□□□ 0.33
HOXC12-201ENST00000243103 ZC3H13Q5T200 1668 aaKnown RBP17.11■□□□□ 0.33
HOXC12-201ENST00000243103 NDUFAB1O14561 156 aa17.11■□□□□ 0.33
HOXC12-201ENST00000243103 CTAGE5O15320 804 aa17.11■□□□□ 0.33
HOXC12-201ENST00000243103 CASP1P29466 404 aa17.11■□□□□ 0.33
HOXC12-201ENST00000243103 EIF4A1P60842 406 aaKnown RBP17.11■□□□□ 0.33
HOXC12-201ENST00000243103 OTUD6BQ8N6M0 293 aa17.11■□□□□ 0.33
HOXC12-201ENST00000243103 TFCP2Q12800 502 aa17.11■□□□□ 0.33
HOXC12-201ENST00000243103 DBNDD2Q9BQY9 259 aa17.11■□□□□ 0.33
HOXC12-201ENST00000243103 KAT14Q9H8E8 782 aa17.11■□□□□ 0.33
HOXC12-201ENST00000243103 TRIM10Q9UDY6 481 aa17.11■□□□□ 0.33
HOXC12-201ENST00000243103 MRFAP1Q9Y605 127 aa17.11■□□□□ 0.33
HOXC12-201ENST00000243103 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
HOXC12-201ENST00000243103 UPP2O95045 317 aa17.1■□□□□ 0.33
HOXC12-201ENST00000243103 CDC25AP30304 524 aa17.1■□□□□ 0.33
HOXC12-201ENST00000243103 PDCLQ13371 301 aa17.1■□□□□ 0.33
HOXC12-201ENST00000243103 SHTN1A0MZ66 631 aa17.1■□□□□ 0.33
HOXC12-201ENST00000243103 SSH3Q8TE77 659 aa17.1■□□□□ 0.33
HOXC12-201ENST00000243103 ANKRD24Q8TF21 1146 aa17.1■□□□□ 0.33
HOXC12-201ENST00000243103 SLF1Q9BQI6 1058 aa17.1■□□□□ 0.33
HOXC12-201ENST00000243103 ZSCAN16Q9H4T2 348 aaPredicted RBP17.1■□□□□ 0.33
HOXC12-201ENST00000243103 REREQ9P2R6 1566 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 CCDC151A5D8V7 595 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 CCP110O43303 1012 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 GGCXP38435 758 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 BEND6Q5SZJ8 279 aaPredicted RBP17.09■□□□□ 0.33
HOXC12-201ENST00000243103 PPFIBP1Q86W92 1011 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 OSBPL5Q9H0X9 879 aaPredicted RBP17.09■□□□□ 0.33
HOXC12-201ENST00000243103 PHLPP2Q6ZVD8 1323 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 SYKP43405 635 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 BEND3Q5T5X7 828 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 PI16Q6UXB8 463 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 SMYD4Q8IYR2 804 aaPredicted RBP17.09■□□□□ 0.33
HOXC12-201ENST00000243103 SH2D3CQ8N5H7 860 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 CALR3Q96L12 384 aaKnown RBP17.09■□□□□ 0.33
HOXC12-201ENST00000243103 ANKZF1Q9H8Y5 726 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 MAPK8IP1Q9UQF2 711 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 A0A087WZG4 1122 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 EPB41L2O43491 1005 aaKnown RBP17.09■□□□□ 0.33
HOXC12-201ENST00000243103 CLNS1AP54105 237 aaKnown RBP17.09■□□□□ 0.33
HOXC12-201ENST00000243103 SAMSN1Q9NSI8 373 aaKnown RBP17.09■□□□□ 0.33
HOXC12-201ENST00000243103 FLT4P35916 1363 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 TNRQ92752 1358 aa17.09■□□□□ 0.33
HOXC12-201ENST00000243103 ARHGEF28Q8N1W1 1705 aaKnown RBP17.08■□□□□ 0.33
HOXC12-201ENST00000243103 MLH3Q9UHC1 1453 aa17.08■□□□□ 0.33
HOXC12-201ENST00000243103 GOLGA6CA6NDK9 693 aa17.08■□□□□ 0.33
HOXC12-201ENST00000243103 TULP1O00294 542 aaPredicted RBP17.08■□□□□ 0.33
HOXC12-201ENST00000243103 SPTLC2O15270 562 aa17.08■□□□□ 0.33
HOXC12-201ENST00000243103 GOLGA6DP0CG33 693 aa17.08■□□□□ 0.33
HOXC12-201ENST00000243103 GPTP24298 496 aa17.08■□□□□ 0.33
HOXC12-201ENST00000243103 AFMP43652 599 aa17.08■□□□□ 0.33
HOXC12-201ENST00000243103 RNASE9P60153 205 aaKnown RBP17.08■□□□□ 0.33
HOXC12-201ENST00000243103 EFCAB13Q8IY85 973 aa17.08■□□□□ 0.33
HOXC12-201ENST00000243103 RNF217Q8TC41 542 aa17.08■□□□□ 0.33
HOXC12-201ENST00000243103 GOLGA6AQ9NYA3 693 aa17.08■□□□□ 0.33
HOXC12-201ENST00000243103 NFE2L3Q9Y4A8 694 aa17.08■□□□□ 0.33
HOXC12-201ENST00000243103 A0A087WUV0 522 aaPredicted RBP17.08■□□□□ 0.32
HOXC12-201ENST00000243103 PPFIA4O75335 1185 aa17.08■□□□□ 0.32
HOXC12-201ENST00000243103 ERCC3P19447 782 aa17.08■□□□□ 0.32
HOXC12-201ENST00000243103 MAP3K9P80192 1104 aa17.08■□□□□ 0.32
HOXC12-201ENST00000243103 ANKRD1Q15327 319 aa17.08■□□□□ 0.32
HOXC12-201ENST00000243103 C8orf76Q96K31 380 aa17.08■□□□□ 0.32
HOXC12-201ENST00000243103 RUFY1Q96T51 708 aa17.08■□□□□ 0.32
HOXC12-201ENST00000243103 MPHOSPH8Q99549 860 aa17.08■□□□□ 0.32
HOXC12-201ENST00000243103 MTMR7Q9Y216 660 aa17.08■□□□□ 0.32
HOXC12-201ENST00000243103 SNAP23O00161 211 aa17.08■□□□□ 0.32
HOXC12-201ENST00000243103 SASH1O94885 1247 aa17.08■□□□□ 0.32
HOXC12-201ENST00000243103 PFKFB1P16118 471 aa17.08■□□□□ 0.32
HOXC12-201ENST00000243103 RBM43Q6ZSC3 357 aaKnown RBP17.08■□□□□ 0.32
HOXC12-201ENST00000243103 SRGAP1Q7Z6B7 1085 aa17.08■□□□□ 0.32
HOXC12-201ENST00000243103 RAPGEF4Q8WZA2 1011 aa17.08■□□□□ 0.32
HOXC12-201ENST00000243103 CUTAO60888 179 aa17.07■□□□□ 0.32
HOXC12-201ENST00000243103 HPDP32754 393 aaPredicted RBP17.07■□□□□ 0.32
HOXC12-201ENST00000243103 CTCFLQ8NI51 663 aaPredicted RBP17.07■□□□□ 0.32
HOXC12-201ENST00000243103 ZNF622Q969S3 477 aaKnown RBP eCLIP17.07■□□□□ 0.32
HOXC12-201ENST00000243103 A2ML1A8K2U0 1454 aa17.07■□□□□ 0.32
HOXC12-201ENST00000243103 VWDEQ8N2E2 1590 aa17.07■□□□□ 0.32
HOXC12-201ENST00000243103 HECW2Q9P2P5 1572 aa17.07■□□□□ 0.32
HOXC12-201ENST00000243103 ARHGAP6O43182 974 aa17.07■□□□□ 0.32
HOXC12-201ENST00000243103 CCDC175P0C221 793 aa17.07■□□□□ 0.32
HOXC12-201ENST00000243103 SLC7A5Q01650 507 aa17.07■□□□□ 0.32
HOXC12-201ENST00000243103 NEXNQ0ZGT2 675 aa17.07■□□□□ 0.32
HOXC12-201ENST00000243103 TTC5Q8N0Z6 440 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms