RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PDHXO00330 501 aa17.36■□□□□ 0.37
DDX39A-201ENST00000242776 OSBPP22059 807 aa17.36■□□□□ 0.37
DDX39A-201ENST00000242776 TCP10Q12799 353 aa17.36■□□□□ 0.37
DDX39A-201ENST00000242776 KLHDC4Q8TBB5 520 aa17.36■□□□□ 0.37
DDX39A-201ENST00000242776 ZNF341Q9BYN7 854 aa17.36■□□□□ 0.37
DDX39A-201ENST00000242776 MYPNQ86TC9 1320 aa17.35■□□□□ 0.37
DDX39A-201ENST00000242776 NBPF7P0C2Y1 421 aaPredicted RBP17.35■□□□□ 0.37
DDX39A-201ENST00000242776 CCL5P13501 91 aa17.35■□□□□ 0.37
DDX39A-201ENST00000242776 DCAF15Q66K64 600 aa17.35■□□□□ 0.37
DDX39A-201ENST00000242776 C17orf99Q6UX52 265 aa17.35■□□□□ 0.37
DDX39A-201ENST00000242776 TBC1D22AQ8WUA7 517 aa17.35■□□□□ 0.37
DDX39A-201ENST00000242776 BICC1Q9H694 974 aaKnown RBP17.35■□□□□ 0.37
DDX39A-201ENST00000242776 SRRDQ9UH36 339 aa17.35■□□□□ 0.37
DDX39A-201ENST00000242776 GRK4P32298 578 aa17.34■□□□□ 0.37
DDX39A-201ENST00000242776 APOBEC3HQ6NTF7 200 aaKnown RBP17.34■□□□□ 0.37
DDX39A-201ENST00000242776 ZDHHC15Q96MV8 337 aa17.34■□□□□ 0.37
DDX39A-201ENST00000242776 RNF208Q9H0X6 261 aa17.34■□□□□ 0.37
DDX39A-201ENST00000242776 ALDH1L1O75891 902 aa17.33■□□□□ 0.37
DDX39A-201ENST00000242776 GNRH1P01148 92 aa17.33■□□□□ 0.37
DDX39A-201ENST00000242776 PRMT2P55345 433 aa17.33■□□□□ 0.37
DDX39A-201ENST00000242776 HDLBPQ00341 1268 aaKnown RBP17.33■□□□□ 0.37
DDX39A-201ENST00000242776 FAM83AQ86UY5 434 aa17.33■□□□□ 0.37
DDX39A-201ENST00000242776 HOOK2Q96ED9 719 aa17.33■□□□□ 0.37
DDX39A-201ENST00000242776 ZCCHC17Q9NP64 241 aaKnown RBP17.33■□□□□ 0.37
DDX39A-201ENST00000242776 HOXD10P28358 340 aa17.32■□□□□ 0.36
DDX39A-201ENST00000242776 PRKCZQ05513 592 aa17.32■□□□□ 0.36
DDX39A-201ENST00000242776 PPATQ06203 517 aa17.32■□□□□ 0.36
DDX39A-201ENST00000242776 CYP2C8P10632 490 aa17.31■□□□□ 0.36
DDX39A-201ENST00000242776 ANKRD23Q86SG2 305 aa17.31■□□□□ 0.36
DDX39A-201ENST00000242776 GABRQQ9UN88 632 aa17.31■□□□□ 0.36
DDX39A-201ENST00000242776 PDE8BO95263 885 aa17.31■□□□□ 0.36
DDX39A-201ENST00000242776 WDR63Q8IWG1 891 aa17.31■□□□□ 0.36
DDX39A-201ENST00000242776 HTATIP2Q9BUP3 242 aa17.31■□□□□ 0.36
DDX39A-201ENST00000242776 MAST3O60307 1309 aa17.3■□□□□ 0.36
DDX39A-201ENST00000242776 GJA8P48165 433 aa17.3■□□□□ 0.36
DDX39A-201ENST00000242776 NFIAQ12857 509 aa17.3■□□□□ 0.36
DDX39A-201ENST00000242776 DIXDC1Q155Q3 683 aa17.3■□□□□ 0.36
DDX39A-201ENST00000242776 ANKRD44Q8N8A2 993 aa17.3■□□□□ 0.36
DDX39A-201ENST00000242776 VGLL2Q8N8G2 317 aa17.3■□□□□ 0.36
DDX39A-201ENST00000242776 NKX2-3Q8TAU0 364 aa17.3■□□□□ 0.36
DDX39A-201ENST00000242776 UNC93B1Q9H1C4 597 aa17.3■□□□□ 0.36
DDX39A-201ENST00000242776 TAOK2Q9UL54 1235 aa17.3■□□□□ 0.36
DDX39A-201ENST00000242776 ADGRA2Q96PE1 1338 aa17.29■□□□□ 0.36
DDX39A-201ENST00000242776 GJB1P08034 283 aa17.29■□□□□ 0.36
DDX39A-201ENST00000242776 UBXN2AP68543 259 aa17.29■□□□□ 0.36
DDX39A-201ENST00000242776 MOGSQ13724 837 aa17.29■□□□□ 0.36
DDX39A-201ENST00000242776 CDC42EP5Q6NZY7 148 aa17.29■□□□□ 0.36
DDX39A-201ENST00000242776 FAM151AQ8WW52 585 aa17.29■□□□□ 0.36
DDX39A-201ENST00000242776 RANBP2P49792 3224 aaKnown RBP17.29■□□□□ 0.36
DDX39A-201ENST00000242776 FARP2O94887 1054 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-201ENST00000242776 IFIT1P09914 478 aaKnown RBP17.28■□□□□ 0.36
DDX39A-201ENST00000242776 ELNP15502 786 aa17.28■□□□□ 0.36
DDX39A-201ENST00000242776 FCGRTP55899 365 aa17.28■□□□□ 0.36
DDX39A-201ENST00000242776 FKBP1CQ5VVH2 108 aa17.28■□□□□ 0.36
DDX39A-201ENST00000242776 HHIPL2Q6UWX4 724 aa17.28■□□□□ 0.36
DDX39A-201ENST00000242776 GADL1Q6ZQY3 521 aa17.28■□□□□ 0.36
DDX39A-201ENST00000242776 U2AF1L4Q8WU68 220 aaKnown RBP17.28■□□□□ 0.36
DDX39A-201ENST00000242776 DAGLAQ9Y4D2 1042 aa17.28■□□□□ 0.36
DDX39A-201ENST00000242776 RPAP1Q9BWH6 1393 aaPredicted RBP17.27■□□□□ 0.36
DDX39A-201ENST00000242776 DOCK2Q92608 1830 aa17.27■□□□□ 0.36
DDX39A-201ENST00000242776 ZFPM1Q8IX07 1006 aa17.27■□□□□ 0.36
DDX39A-201ENST00000242776 SLC17A8Q8NDX2 589 aa17.27■□□□□ 0.36
DDX39A-201ENST00000242776 PARK7Q99497 189 aaKnown RBP17.27■□□□□ 0.36
DDX39A-201ENST00000242776 KCNH4Q9UQ05 1017 aa17.27■□□□□ 0.36
DDX39A-201ENST00000242776 NR2E3Q9Y5X4 410 aa17.27■□□□□ 0.36
DDX39A-201ENST00000242776 SLURP2P0DP57 97 aa17.26■□□□□ 0.35
DDX39A-201ENST00000242776 PUM3Q15397 648 aaKnown RBP17.26■□□□□ 0.35
DDX39A-201ENST00000242776 RABL6Q3YEC7 729 aaPredicted RBP17.26■□□□□ 0.35
DDX39A-201ENST00000242776 GPAT2Q6NUI2 795 aa17.26■□□□□ 0.35
DDX39A-201ENST00000242776 UBE2Q1Q7Z7E8 422 aa17.26■□□□□ 0.35
DDX39A-201ENST00000242776 MRIQ9BWK5 157 aa17.26■□□□□ 0.35
DDX39A-201ENST00000242776 USP40Q9NVE5 1235 aa17.26■□□□□ 0.35
DDX39A-201ENST00000242776 DLL1O00548 723 aa17.25■□□□□ 0.35
DDX39A-201ENST00000242776 ZBTB7BO15156 539 aaPredicted RBP17.25■□□□□ 0.35
DDX39A-201ENST00000242776 ADCY3O60266 1144 aa17.25■□□□□ 0.35
DDX39A-201ENST00000242776 TFRCP02786 760 aaKnown RBP17.25■□□□□ 0.35
DDX39A-201ENST00000242776 PRDX5P30044 214 aa17.25■□□□□ 0.35
DDX39A-201ENST00000242776 FAM198AQ9UFP1 575 aa17.25■□□□□ 0.35
DDX39A-201ENST00000242776 ZNF112Q9UJU3 913 aa17.25■□□□□ 0.35
DDX39A-201ENST00000242776 SUGT1Q9Y2Z0 365 aa17.25■□□□□ 0.35
DDX39A-201ENST00000242776 DOCK3Q8IZD9 2030 aa17.25■□□□□ 0.35
DDX39A-201ENST00000242776 MYH2Q9UKX2 1941 aa17.25■□□□□ 0.35
DDX39A-201ENST00000242776 SOX1O00570 391 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-201ENST00000242776 EVI5O60447 810 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 BCRP11274 1271 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 SLC5A1P13866 664 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 FGFR2P21802 821 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 SLAIN1Q8ND83 568 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 WDR66Q8TBY9 1149 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 LRCH3Q96II8 777 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-201ENST00000242776 ZHX2Q9Y6X8 837 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 ALPK3Q96L96 1907 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 UTYO14607 1347 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 SGPL1O95470 568 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 INHAP05111 366 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 FLT3LGP49771 235 aa17.24■□□□□ 0.35
DDX39A-201ENST00000242776 HNRNPUQ00839 825 aaKnown RBP eCLIP17.24■□□□□ 0.35
DDX39A-201ENST00000242776 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
DDX39A-201ENST00000242776 CCDC84Q86UT8 332 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms