RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 WDHD1O75717 1129 aaPredicted RBP16.84■□□□□ 0.29
VEGFA-201ENST00000230480 IGHDP01880 384 aa16.84■□□□□ 0.29
VEGFA-201ENST00000230480 SLURP2P0DP57 97 aa16.84■□□□□ 0.29
VEGFA-201ENST00000230480 CCDC158Q5M9N0 1113 aa16.84■□□□□ 0.29
VEGFA-201ENST00000230480 IFFO2Q5TF58 517 aa16.84■□□□□ 0.29
VEGFA-201ENST00000230480 SH3BP5LQ7L8J4 393 aa16.84■□□□□ 0.29
VEGFA-201ENST00000230480 EDC3Q96F86 508 aaKnown RBP16.84■□□□□ 0.29
VEGFA-201ENST00000230480 CAPNS2Q96L46 248 aa16.84■□□□□ 0.29
VEGFA-201ENST00000230480 DDX4Q9NQI0 724 aaKnown RBP16.84■□□□□ 0.29
VEGFA-201ENST00000230480 MAST3O60307 1309 aa16.83■□□□□ 0.28
VEGFA-201ENST00000230480 HUNKP57058 714 aa16.83■□□□□ 0.28
VEGFA-201ENST00000230480 HDAC1Q13547 482 aaPredicted RBP16.83■□□□□ 0.28
VEGFA-201ENST00000230480 MAP3K11Q16584 847 aa16.83■□□□□ 0.28
VEGFA-201ENST00000230480 FKBP1CQ5VVH2 108 aa16.83■□□□□ 0.28
VEGFA-201ENST00000230480 ERICH6Q7L0X2 663 aa16.83■□□□□ 0.28
VEGFA-201ENST00000230480 SALL3Q9BXA9 1300 aa16.83■□□□□ 0.28
VEGFA-201ENST00000230480 MAST2Q6P0Q8 1798 aa16.82■□□□□ 0.28
VEGFA-201ENST00000230480 ATRNL1Q5VV63 1379 aa16.82■□□□□ 0.28
VEGFA-201ENST00000230480 MROH7-TTC4A0A0A0MT08 1334 aa16.82■□□□□ 0.28
VEGFA-201ENST00000230480 CHGBP05060 677 aa16.82■□□□□ 0.28
VEGFA-201ENST00000230480 CLASRPQ8N2M8 674 aaKnown RBP16.82■□□□□ 0.28
VEGFA-201ENST00000230480 LRRCC1Q9C099 1032 aa16.82■□□□□ 0.28
VEGFA-201ENST00000230480 PPP2R3BQ9Y5P8 575 aa16.82■□□□□ 0.28
VEGFA-201ENST00000230480 BTDP43251 543 aa16.81■□□□□ 0.28
VEGFA-201ENST00000230480 IRX6P78412 446 aaPredicted RBP16.81■□□□□ 0.28
VEGFA-201ENST00000230480 PRKG1Q13976 671 aa16.81■□□□□ 0.28
VEGFA-201ENST00000230480 SLFNL1Q499Z3 407 aa16.81■□□□□ 0.28
VEGFA-201ENST00000230480 RGMBQ6NW40 437 aa16.81■□□□□ 0.28
VEGFA-201ENST00000230480 FAM83AQ86UY5 434 aa16.81■□□□□ 0.28
VEGFA-201ENST00000230480 ZGPATQ8N5A5 531 aaKnown RBP16.81■□□□□ 0.28
VEGFA-201ENST00000230480 C2orf69Q8N8R5 385 aa16.81■□□□□ 0.28
VEGFA-201ENST00000230480 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.81■□□□□ 0.28
VEGFA-201ENST00000230480 IDI2Q9BXS1 227 aa16.81■□□□□ 0.28
VEGFA-201ENST00000230480 USP40Q9NVE5 1235 aa16.81■□□□□ 0.28
VEGFA-201ENST00000230480 SIPA1L1O43166 1804 aa16.81■□□□□ 0.28
VEGFA-201ENST00000230480 FOCADQ5VW36 1801 aa16.8■□□□□ 0.28
VEGFA-201ENST00000230480 MYO1BO43795 1136 aa16.8■□□□□ 0.28
VEGFA-201ENST00000230480 ATP5JP18859 108 aa16.8■□□□□ 0.28
VEGFA-201ENST00000230480 FKBP1BP68106 108 aa16.8■□□□□ 0.28
VEGFA-201ENST00000230480 SPTY2D1Q68D10 685 aaPredicted RBP16.8■□□□□ 0.28
VEGFA-201ENST00000230480 RASAL3Q86YV0 1011 aa16.8■□□□□ 0.28
VEGFA-201ENST00000230480 CLMNQ96JQ2 1002 aa16.8■□□□□ 0.28
VEGFA-201ENST00000230480 AK9Q5TCS8 1911 aa16.79■□□□□ 0.28
VEGFA-201ENST00000230480 SLC10A3P09131 477 aa16.79■□□□□ 0.28
VEGFA-201ENST00000230480 PPP4CP60510 307 aa16.79■□□□□ 0.28
VEGFA-201ENST00000230480 TSHZ3Q63HK5 1081 aa16.79■□□□□ 0.28
VEGFA-201ENST00000230480 FAM151AQ8WW52 585 aa16.79■□□□□ 0.28
VEGFA-201ENST00000230480 WBP1LQ9NX94 342 aa16.79■□□□□ 0.28
VEGFA-201ENST00000230480 RAI14Q9P0K7 980 aa16.79■□□□□ 0.28
VEGFA-201ENST00000230480 LAMB1P07942 1786 aa16.79■□□□□ 0.28
VEGFA-201ENST00000230480 TCRBV5S4A2TA0A5A2 114 aa16.78■□□□□ 0.28
VEGFA-201ENST00000230480 IFIT2P09913 472 aaKnown RBP16.78■□□□□ 0.28
VEGFA-201ENST00000230480 GJA5P36382 358 aa16.78■□□□□ 0.28
VEGFA-201ENST00000230480 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.78■□□□□ 0.28
VEGFA-201ENST00000230480 DZIP1Q86YF9 867 aaKnown RBP16.78■□□□□ 0.28
VEGFA-201ENST00000230480 SMC5Q8IY18 1101 aa16.78■□□□□ 0.28
VEGFA-201ENST00000230480 BOLA2Q9H3K6 86 aa16.78■□□□□ 0.28
VEGFA-201ENST00000230480 LRP2BPQ9P2M1 347 aa16.78■□□□□ 0.28
VEGFA-201ENST00000230480 ANGEL1Q9UNK9 670 aaKnown RBP16.78■□□□□ 0.28
VEGFA-201ENST00000230480 RPAP1Q9BWH6 1393 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-201ENST00000230480 MYH7P12883 1935 aa16.77■□□□□ 0.28
VEGFA-201ENST00000230480 DDTLA6NHG4 134 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-201ENST00000230480 RGS3P49796 1198 aa16.77■□□□□ 0.28
VEGFA-201ENST00000230480 DYNLL1P63167 89 aaKnown RBP16.77■□□□□ 0.28
VEGFA-201ENST00000230480 MAP3K10Q02779 954 aa16.77■□□□□ 0.28
VEGFA-201ENST00000230480 TCP10Q12799 353 aa16.77■□□□□ 0.28
VEGFA-201ENST00000230480 SH3RF3Q8TEJ3 882 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-201ENST00000230480 HAUS7Q99871 368 aa16.77■□□□□ 0.28
VEGFA-201ENST00000230480 BCL11AQ9H165 835 aa16.77■□□□□ 0.28
VEGFA-201ENST00000230480 AAMPQ13685 434 aa16.76■□□□□ 0.27
VEGFA-201ENST00000230480 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.76■□□□□ 0.272e-42■□□□□ 11.1
VEGFA-201ENST00000230480 PI4K2BQ8TCG2 481 aa16.76■□□□□ 0.27
VEGFA-201ENST00000230480 GOLIM4O00461 696 aa16.75■□□□□ 0.27
VEGFA-201ENST00000230480 ENTPD3O75355 529 aa16.75■□□□□ 0.27
VEGFA-201ENST00000230480 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
VEGFA-201ENST00000230480 HSPA1AP0DMV8 641 aaKnown RBP16.75■□□□□ 0.27
VEGFA-201ENST00000230480 HSPA1BP0DMV9 641 aaKnown RBP16.75■□□□□ 0.27
VEGFA-201ENST00000230480 MAP2K2P36507 400 aa16.75■□□□□ 0.27
VEGFA-201ENST00000230480 ZNF157P51786 506 aaPredicted RBP16.75■□□□□ 0.27
VEGFA-201ENST00000230480 KIF23Q02241 960 aaPredicted RBP16.75■□□□□ 0.27
VEGFA-201ENST00000230480 GRM1Q13255 1194 aa16.75■□□□□ 0.27
VEGFA-201ENST00000230480 TNFAIP1Q13829 316 aa16.75■□□□□ 0.27
VEGFA-201ENST00000230480 SUPT20HL1Q3ZLR7 823 aa16.75■□□□□ 0.27
VEGFA-201ENST00000230480 NAA16Q6N069 864 aaPredicted RBP16.75■□□□□ 0.27
VEGFA-201ENST00000230480 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
VEGFA-201ENST00000230480 CSRNP1Q96S65 589 aa16.75■□□□□ 0.27
VEGFA-201ENST00000230480 RIOK1Q9BRS2 568 aaKnown RBP16.75■□□□□ 0.27
VEGFA-201ENST00000230480 ZNF112Q9UJU3 913 aa16.75■□□□□ 0.27
VEGFA-201ENST00000230480 FOXN1O15353 648 aa16.74■□□□□ 0.27
VEGFA-201ENST00000230480 IDH1O75874 414 aaKnown RBP16.74■□□□□ 0.27
VEGFA-201ENST00000230480 LDHCP07864 332 aa16.74■□□□□ 0.27
VEGFA-201ENST00000230480 CYP7A1P22680 504 aa16.74■□□□□ 0.27
VEGFA-201ENST00000230480 RRP1BQ14684 758 aaKnown RBP16.74■□□□□ 0.27
VEGFA-201ENST00000230480 MIGA2Q7L4E1 593 aa16.74■□□□□ 0.27
VEGFA-201ENST00000230480 MAGEB6Q8N7X4 407 aa16.74■□□□□ 0.27
VEGFA-201ENST00000230480 ECHDC1Q9NTX5 307 aa16.74■□□□□ 0.27
VEGFA-201ENST00000230480 AATFQ9NY61 560 aaKnown RBP eCLIP16.74■□□□□ 0.27
VEGFA-201ENST00000230480 PHF20L1A8MW92 1017 aa16.73■□□□□ 0.27
VEGFA-201ENST00000230480 IGSF3O75054 1194 aa16.73■□□□□ 0.27
VEGFA-201ENST00000230480 PDE6AP16499 860 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms