RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 SLC4A4Q9Y6R1 1079 aa13.32□□□□□ -0.28
CTSC-201ENST00000227266 EIF5BO60841 1220 aaKnown RBP13.31□□□□□ -0.28
CTSC-201ENST00000227266 APOBEC3HQ6NTF7 200 aaKnown RBP13.31□□□□□ -0.28
CTSC-201ENST00000227266 DPY19L2Q6NUT2 758 aa13.31□□□□□ -0.28
CTSC-201ENST00000227266 SH3RF3Q8TEJ3 882 aaPredicted RBP13.31□□□□□ -0.28
CTSC-201ENST00000227266 LSG1Q9H089 658 aaKnown RBP13.31□□□□□ -0.28
CTSC-201ENST00000227266 CNOT7Q9UIV1 285 aaKnown RBP13.31□□□□□ -0.28
CTSC-201ENST00000227266 HSPD1P10809 573 aaKnown RBP13.31□□□□□ -0.28
CTSC-201ENST00000227266 PPP4CP60510 307 aa13.31□□□□□ -0.28
CTSC-201ENST00000227266 DLGAP5Q15398 846 aa13.31□□□□□ -0.28
CTSC-201ENST00000227266 RBM26Q5T8P6 1007 aaKnown RBP13.31□□□□□ -0.28
CTSC-201ENST00000227266 CRNKL1Q9BZJ0 848 aaKnown RBP13.31□□□□□ -0.28
CTSC-201ENST00000227266 UPF2Q9HAU5 1272 aaKnown RBP13.31□□□□□ -0.28
CTSC-201ENST00000227266 ZC3H4Q9UPT8 1303 aaKnown RBP13.3□□□□□ -0.28
CTSC-201ENST00000227266 SBF1O95248 1867 aa13.3□□□□□ -0.28
CTSC-201ENST00000227266 CCDC88AQ3V6T2 1871 aa13.3□□□□□ -0.28
CTSC-201ENST00000227266 PLCG2P16885 1265 aa13.3□□□□□ -0.28
CTSC-201ENST00000227266 GNAT2P19087 354 aa13.3□□□□□ -0.28
CTSC-201ENST00000227266 ZNF280AP59817 542 aaPredicted RBP13.3□□□□□ -0.28
CTSC-201ENST00000227266 SDR42E1Q8WUS8 393 aa13.3□□□□□ -0.28
CTSC-201ENST00000227266 PRMT6Q96LA8 375 aaPredicted RBP13.3□□□□□ -0.28
CTSC-201ENST00000227266 MYOZ2Q9NPC6 264 aa13.3□□□□□ -0.28
CTSC-201ENST00000227266 USP40Q9NVE5 1235 aa13.3□□□□□ -0.28
CTSC-201ENST00000227266 GPRC5DQ9NZD1 345 aa13.3□□□□□ -0.28
CTSC-201ENST00000227266 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 H7C1D1 291 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 RHBDL3P58872 404 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 TBC1D10BQ4KMP7 808 aaPredicted RBP13.29□□□□□ -0.28
CTSC-201ENST00000227266 CDC42EP5Q6NZY7 148 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 SAMD7Q7Z3H4 446 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 CERS3Q8IU89 383 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 TEX11Q8IYF3 940 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 USP26Q9BXU7 913 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 MAST2Q6P0Q8 1798 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 ZNF646O15015 1829 aaPredicted RBP13.29□□□□□ -0.28
CTSC-201ENST00000227266 GSG1L2A8MUP6 293 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 PATL2C9JE40 543 aaKnown RBP13.29□□□□□ -0.28
CTSC-201ENST00000227266 FOXP2O15409 715 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 EGFRP00533 1210 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 LMOD1P29536 600 aaPredicted RBP13.29□□□□□ -0.28
CTSC-201ENST00000227266 EPS15P42566 896 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 USP5P45974 858 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 DSCC1Q9BVC3 393 aa13.29□□□□□ -0.28
CTSC-201ENST00000227266 TDRD3Q9H7E2 651 aaKnown RBP13.29□□□□□ -0.28
CTSC-201ENST00000227266 TIAM2Q8IVF5 1701 aa13.28□□□□□ -0.28
CTSC-201ENST00000227266 PSME4Q14997 1843 aa13.28□□□□□ -0.28
CTSC-201ENST00000227266 GLTPD2A6NH11 291 aa13.28□□□□□ -0.28
CTSC-201ENST00000227266 MMP14P50281 582 aa13.28□□□□□ -0.28
CTSC-201ENST00000227266 CACNB3P54284 484 aa13.28□□□□□ -0.28
CTSC-201ENST00000227266 TGFBRAP1Q8WUH2 860 aa13.28□□□□□ -0.28
CTSC-201ENST00000227266 MAP4K1Q92918 833 aa13.28□□□□□ -0.28
CTSC-201ENST00000227266 NACAP1Q9BZK3 213 aa13.28□□□□□ -0.28
CTSC-201ENST00000227266 EPB41L4AQ9HCS5 686 aaPredicted RBP13.28□□□□□ -0.28
CTSC-201ENST00000227266 RBM8AQ9Y5S9 174 aaKnown RBP13.28□□□□□ -0.28
CTSC-201ENST00000227266 MYH7P12883 1935 aa13.28□□□□□ -0.28
CTSC-201ENST00000227266 CLRN2A0PK11 232 aa13.27□□□□□ -0.28
CTSC-201ENST00000227266 PRKCSHP14314 528 aaPredicted RBP13.27□□□□□ -0.28
CTSC-201ENST00000227266 TDO2P48775 406 aa13.27□□□□□ -0.28
CTSC-201ENST00000227266 PICALMQ13492 652 aa13.27□□□□□ -0.28
CTSC-201ENST00000227266 NBPF9Q3BBW0 867 aa13.27□□□□□ -0.28
CTSC-201ENST00000227266 MAPKAPK5Q8IW41 473 aa13.27□□□□□ -0.28
CTSC-201ENST00000227266 IFNL3Q8IZI9 196 aa13.27□□□□□ -0.28
CTSC-201ENST00000227266 DDRGK1Q96HY6 314 aa13.27□□□□□ -0.28
CTSC-201ENST00000227266 U3KPZ7 1027 aaPredicted RBP13.27□□□□□ -0.28
CTSC-201ENST00000227266 DICER1Q9UPY3 1922 aaKnown RBP13.27□□□□□ -0.29
CTSC-201ENST00000227266 WNT10BO00744 389 aa13.27□□□□□ -0.29
CTSC-201ENST00000227266 MYO1BO43795 1136 aa13.27□□□□□ -0.29
CTSC-201ENST00000227266 FGAP02671 866 aa13.27□□□□□ -0.29
CTSC-201ENST00000227266 KIF4BQ2VIQ3 1234 aa13.27□□□□□ -0.29
CTSC-201ENST00000227266 MTMR14Q8NCE2 650 aa13.27□□□□□ -0.29
CTSC-201ENST00000227266 C22orf23Q9BZE7 217 aa13.27□□□□□ -0.29
CTSC-201ENST00000227266 NAPBQ9H115 298 aa13.27□□□□□ -0.29
CTSC-201ENST00000227266 WDHD1O75717 1129 aaPredicted RBP13.26□□□□□ -0.29
CTSC-201ENST00000227266 MCCP23508 829 aa13.26□□□□□ -0.29
CTSC-201ENST00000227266 NFIAQ12857 509 aa13.26□□□□□ -0.29
CTSC-201ENST00000227266 VEZTQ9HBM0 779 aa13.26□□□□□ -0.29
CTSC-201ENST00000227266 DCP1AQ9NPI6 582 aaPredicted RBP13.26□□□□□ -0.29
CTSC-201ENST00000227266 ATP8A2Q9NTI2 1148 aa13.26□□□□□ -0.29
CTSC-201ENST00000227266 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
CTSC-201ENST00000227266 ZNF70Q9UC06 446 aaPredicted RBP13.26□□□□□ -0.29
CTSC-201ENST00000227266 CTNNA3Q9UI47 895 aa13.26□□□□□ -0.29
CTSC-201ENST00000227266 MYH2Q9UKX2 1941 aa13.26□□□□□ -0.29
CTSC-201ENST00000227266 ADAMTSL1Q8N6G6 1762 aa13.25□□□□□ -0.29
CTSC-201ENST00000227266 RPAP1Q9BWH6 1393 aaPredicted RBP13.25□□□□□ -0.29
CTSC-201ENST00000227266 SLC4A8Q2Y0W8 1093 aa13.25□□□□□ -0.29
CTSC-201ENST00000227266 TRPM4Q8TD43 1214 aa13.25□□□□□ -0.29
CTSC-201ENST00000227266 ZBED3Q96IU2 234 aaPredicted RBP13.25□□□□□ -0.29
CTSC-201ENST00000227266 L3MBTL3Q96JM7 780 aaPredicted RBP13.25□□□□□ -0.29
CTSC-201ENST00000227266 MCM9Q9NXL9 1143 aa13.25□□□□□ -0.29
CTSC-201ENST00000227266 SAP30BPQ9UHR5 308 aaKnown RBP13.25□□□□□ -0.29
CTSC-201ENST00000227266 FLT1P17948 1338 aa13.25□□□□□ -0.29
CTSC-201ENST00000227266 EPB41L2O43491 1005 aaKnown RBP13.25□□□□□ -0.29
CTSC-201ENST00000227266 HAND2P61296 217 aa13.25□□□□□ -0.29
CTSC-201ENST00000227266 TCP10Q12799 353 aa13.25□□□□□ -0.29
CTSC-201ENST00000227266 ALX1Q15699 326 aa13.25□□□□□ -0.29
CTSC-201ENST00000227266 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
CTSC-201ENST00000227266 DDX4Q9NQI0 724 aaKnown RBP13.25□□□□□ -0.29
CTSC-201ENST00000227266 ADARB2Q9NS39 739 aaKnown RBP13.25□□□□□ -0.29
CTSC-201ENST00000227266 HACL1Q9UJ83 578 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms