RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ARHGAP45Q92619 1136 aa14.87□□□□□ -0.03
COL1A1-201ENST00000225964 TRIM7Q9C029 511 aa14.87□□□□□ -0.03
COL1A1-201ENST00000225964 FAM204AQ9H8W3 233 aa14.87□□□□□ -0.03
COL1A1-201ENST00000225964 TTC41PQ6P2S7 1318 aa14.87□□□□□ -0.03
COL1A1-201ENST00000225964 GMNNO75496 209 aa14.87□□□□□ -0.03
COL1A1-201ENST00000225964 LARGE2Q8N3Y3 721 aa14.87□□□□□ -0.03
COL1A1-201ENST00000225964 GPATCH11Q8N954 259 aa14.87□□□□□ -0.03
COL1A1-201ENST00000225964 SEC62Q99442 399 aaKnown RBP14.87□□□□□ -0.03
COL1A1-201ENST00000225964 ARMT1Q9H993 441 aa14.87□□□□□ -0.03
COL1A1-201ENST00000225964 CALUO43852 315 aaPredicted RBP14.87□□□□□ -0.03
COL1A1-201ENST00000225964 NCAPH2Q6IBW4 605 aa14.87□□□□□ -0.03
COL1A1-201ENST00000225964 M0QZ92 97 aa14.86□□□□□ -0.03
COL1A1-201ENST00000225964 CDAN1Q8IWY9 1227 aa14.86□□□□□ -0.03
COL1A1-201ENST00000225964 MTUS1Q9ULD2 1270 aa14.86□□□□□ -0.03
COL1A1-201ENST00000225964 ITGA6P23229 1130 aa14.86□□□□□ -0.03
COL1A1-201ENST00000225964 USH1GQ495M9 461 aa14.86□□□□□ -0.03
COL1A1-201ENST00000225964 IPO4Q8TEX9 1081 aaKnown RBP14.86□□□□□ -0.03
COL1A1-201ENST00000225964 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
COL1A1-201ENST00000225964 ZBED4O75132 1171 aa14.86□□□□□ -0.03
COL1A1-201ENST00000225964 ZNF569Q5MCW4 686 aa14.86□□□□□ -0.03
COL1A1-201ENST00000225964 LEO1Q8WVC0 666 aaPredicted RBP14.86□□□□□ -0.03
COL1A1-201ENST00000225964 URB2Q14146 1524 aaKnown RBP14.86□□□□□ -0.03
COL1A1-201ENST00000225964 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.86□□□□□ -0.03
COL1A1-201ENST00000225964 HDAC1Q13547 482 aaPredicted RBP14.86□□□□□ -0.03
COL1A1-201ENST00000225964 DPP8Q6V1X1 898 aaPredicted RBP14.86□□□□□ -0.03
COL1A1-201ENST00000225964 TBC1D32Q96NH3 1257 aa14.86□□□□□ -0.03
COL1A1-201ENST00000225964 LZTFL1Q9NQ48 299 aa14.86□□□□□ -0.03
COL1A1-201ENST00000225964 PPANQ9NQ55 473 aaKnown RBP14.86□□□□□ -0.03
COL1A1-201ENST00000225964 MTRF1LQ9UGC7 380 aaKnown RBP14.86□□□□□ -0.03
COL1A1-201ENST00000225964 ABCA10Q8WWZ4 1543 aa14.86□□□□□ -0.03
COL1A1-201ENST00000225964 EIF4G3O43432 1585 aaKnown RBP14.86□□□□□ -0.03
COL1A1-201ENST00000225964 TRAF5O00463 557 aa14.86□□□□□ -0.03
COL1A1-201ENST00000225964 RUFY3Q7L099 469 aa14.86□□□□□ -0.03
COL1A1-201ENST00000225964 UBLCP1Q8WVY7 318 aaPredicted RBP14.86□□□□□ -0.03
COL1A1-201ENST00000225964 AK2P54819 239 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 TCIRG1Q13488 830 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 CCDC186Q7Z3E2 898 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 JAKMIP2Q96AA8 810 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 TNFAIP3P21580 790 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 TCP10Q12799 353 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 INF2Q27J81 1249 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 EP400NLQ6ZTU2 488 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 NAP1L3Q99457 506 aaPredicted RBP14.85□□□□□ -0.03
COL1A1-201ENST00000225964 FNBP4Q8N3X1 1017 aaPredicted RBP14.85□□□□□ -0.03
COL1A1-201ENST00000225964 LINS1Q8NG48 757 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 UIMC1Q96RL1 719 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.85□□□□□ -0.03
COL1A1-201ENST00000225964 FLT4P35916 1363 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 ITSN2Q9NZM3 1697 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 TLDC2A0PJX2 215 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 ARFGAP3Q9NP61 516 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 B4E1Z4 1266 aa14.85□□□□□ -0.03
COL1A1-201ENST00000225964 MRRFQ96E11 262 aaKnown RBP14.85□□□□□ -0.03
COL1A1-201ENST00000225964 GTPBP4Q9BZE4 634 aaKnown RBP14.85□□□□□ -0.03
COL1A1-201ENST00000225964 AATFQ9NY61 560 aaKnown RBP eCLIP14.84□□□□□ -0.03
COL1A1-201ENST00000225964 MAST3O60307 1309 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 ALDH3A1P30838 453 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 PPP2R5DQ14738 602 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 KLHL40Q2TBA0 621 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 FAM89AQ96GI7 184 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 PKNOX2Q96KN3 472 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 EXOC7Q9UPT5 735 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 ARHGEF35A5YM69 484 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 SPOPO43791 374 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 PIK3AP1Q6ZUJ8 805 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 NOC4LQ9BVI4 516 aaKnown RBP14.84□□□□□ -0.03
COL1A1-201ENST00000225964 AZI2Q9H6S1 392 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 PDE4DQ08499 809 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 IQUBQ8NA54 791 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 HELLSQ9NRZ9 838 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 PUM3Q15397 648 aaKnown RBP14.84□□□□□ -0.03
COL1A1-201ENST00000225964 BRAPQ7Z569 592 aa14.84□□□□□ -0.03
COL1A1-201ENST00000225964 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.84□□□□□ -0.03
COL1A1-201ENST00000225964 V9GYY5 206 aaPredicted RBP14.84□□□□□ -0.03
COL1A1-201ENST00000225964 PPP2R5CQ13362 524 aa14.83□□□□□ -0.03
COL1A1-201ENST00000225964 DHX32Q7L7V1 743 aaKnown RBP14.83□□□□□ -0.03
COL1A1-201ENST00000225964 ZNF710Q8N1W2 664 aa14.83□□□□□ -0.03
COL1A1-201ENST00000225964 STK10O94804 968 aaKnown RBP14.83□□□□□ -0.04
COL1A1-201ENST00000225964 IRX5P78411 483 aaPredicted RBP14.83□□□□□ -0.04
COL1A1-201ENST00000225964 LIN9Q5TKA1 542 aa14.83□□□□□ -0.04
COL1A1-201ENST00000225964 CCDC24Q8N4L8 307 aa14.83□□□□□ -0.04
COL1A1-201ENST00000225964 FAM200AQ8TCP9 573 aa14.83□□□□□ -0.04
COL1A1-201ENST00000225964 NPATQ14207 1427 aa14.83□□□□□ -0.04
COL1A1-201ENST00000225964 NOL3O60936 208 aaKnown RBP14.83□□□□□ -0.04
COL1A1-201ENST00000225964 ERCC5P28715 1186 aaPredicted RBP14.83□□□□□ -0.04
COL1A1-201ENST00000225964 C19orf44Q9H6X5 657 aa14.83□□□□□ -0.04
COL1A1-201ENST00000225964 CCDC87Q9NVE4 849 aa14.83□□□□□ -0.04
COL1A1-201ENST00000225964 KRT19P08727 400 aa14.83□□□□□ -0.04
COL1A1-201ENST00000225964 CALCOCO2Q13137 446 aa14.83□□□□□ -0.04
COL1A1-201ENST00000225964 FAM98CQ17RN3 349 aaKnown RBP14.83□□□□□ -0.04
COL1A1-201ENST00000225964 CPXCR1Q8N123 301 aa14.83□□□□□ -0.04
COL1A1-201ENST00000225964 HOOK2Q96ED9 719 aa14.83□□□□□ -0.04
COL1A1-201ENST00000225964 YTHDC2Q9H6S0 1430 aaKnown RBP14.83□□□□□ -0.04
COL1A1-201ENST00000225964 IFNKQ9P0W0 207 aa14.83□□□□□ -0.04
COL1A1-201ENST00000225964 RSPH14Q9UHP6 348 aa14.83□□□□□ -0.04
COL1A1-201ENST00000225964 RHOXF2BP0C7M4 288 aa14.82□□□□□ -0.04
COL1A1-201ENST00000225964 RHOXF2Q9BQY4 288 aa14.82□□□□□ -0.04
COL1A1-201ENST00000225964 TYRO3Q06418 890 aa14.82□□□□□ -0.04
COL1A1-201ENST00000225964 ASIC2Q16515 512 aa14.82□□□□□ -0.04
COL1A1-201ENST00000225964 HAUS3Q68CZ6 603 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms