RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 CHMP4CQ96CF2 233 aa17.56■□□□□ 0.4
CCDC47-201ENST00000225726 ZSCAN22P10073 491 aaPredicted RBP17.55■□□□□ 0.4
CCDC47-201ENST00000225726 DYNLL1P63167 89 aaKnown RBP17.55■□□□□ 0.4
CCDC47-201ENST00000225726 LLPHQ9BRT6 129 aaKnown RBP17.55■□□□□ 0.4
CCDC47-201ENST00000225726 CNNM2Q9H8M5 875 aa17.55■□□□□ 0.4
CCDC47-201ENST00000225726 LDHBP07195 334 aaKnown RBP17.55■□□□□ 0.4
CCDC47-201ENST00000225726 MCTP1Q6DN14 999 aa17.55■□□□□ 0.4
CCDC47-201ENST00000225726 DZIP1Q86YF9 867 aaKnown RBP17.55■□□□□ 0.4
CCDC47-201ENST00000225726 NEDD4P46934 1319 aa17.55■□□□□ 0.4
CCDC47-201ENST00000225726 SCRN1Q12765 414 aa17.55■□□□□ 0.4
CCDC47-201ENST00000225726 SKOR2Q2VWA4 1001 aaPredicted RBP17.55■□□□□ 0.4
CCDC47-201ENST00000225726 GIMAP6Q6P9H5 292 aa17.55■□□□□ 0.4
CCDC47-201ENST00000225726 STAG1Q8WVM7 1258 aa17.55■□□□□ 0.4
CCDC47-201ENST00000225726 C6orf229H3BNL8 230 aa17.54■□□□□ 0.4
CCDC47-201ENST00000225726 PDCP20941 246 aa17.54■□□□□ 0.4
CCDC47-201ENST00000225726 CTDSPL2Q05D32 466 aa17.54■□□□□ 0.4
CCDC47-201ENST00000225726 AKNAD1Q5T1N1 836 aa17.54■□□□□ 0.4
CCDC47-201ENST00000225726 JAG2Q9Y219 1238 aa17.54■□□□□ 0.4
CCDC47-201ENST00000225726 SDR42E1Q8WUS8 393 aa17.54■□□□□ 0.4
CCDC47-201ENST00000225726 KRT23Q9C075 422 aa17.54■□□□□ 0.4
CCDC47-201ENST00000225726 PDIA3P30101 505 aaKnown RBP17.53■□□□□ 0.4
CCDC47-201ENST00000225726 GSTO1P78417 241 aa17.53■□□□□ 0.4
CCDC47-201ENST00000225726 STYK1Q6J9G0 422 aa17.53■□□□□ 0.4
CCDC47-201ENST00000225726 ANAPC4Q9UJX5 808 aa17.53■□□□□ 0.4
CCDC47-201ENST00000225726 CYB5R4Q7L1T6 521 aa17.53■□□□□ 0.4
CCDC47-201ENST00000225726 C2CD5Q86YS7 1000 aa17.53■□□□□ 0.4
CCDC47-201ENST00000225726 MFSD6Q6ZSS7 791 aa17.53■□□□□ 0.4
CCDC47-201ENST00000225726 CRNKL1Q9BZJ0 848 aaKnown RBP17.53■□□□□ 0.4
CCDC47-201ENST00000225726 RNF41Q9H4P4 317 aaPredicted RBP17.53■□□□□ 0.4
CCDC47-201ENST00000225726 B4E1Z4 1266 aa17.52■□□□□ 0.4
CCDC47-201ENST00000225726 PPARAQ07869 468 aa17.52■□□□□ 0.4
CCDC47-201ENST00000225726 MPNDQ8N594 471 aa17.52■□□□□ 0.4
CCDC47-201ENST00000225726 SMARCC2Q8TAQ2 1214 aa17.52■□□□□ 0.4
CCDC47-201ENST00000225726 TMEM87BQ96K49 555 aa17.52■□□□□ 0.4
CCDC47-201ENST00000225726 ZMYND15Q9H091 742 aa17.52■□□□□ 0.4
CCDC47-201ENST00000225726 TMX4Q9H1E5 349 aaPredicted RBP17.52■□□□□ 0.4
CCDC47-201ENST00000225726 MTMR6Q9Y217 621 aa17.52■□□□□ 0.4
CCDC47-201ENST00000225726 LARP1BQ659C4 914 aaKnown RBP17.52■□□□□ 0.4
CCDC47-201ENST00000225726 GPHNQ9NQX3 736 aaPredicted RBP17.52■□□□□ 0.4
CCDC47-201ENST00000225726 H0YIN7 160 aa17.52■□□□□ 0.39
CCDC47-201ENST00000225726 F13A1P00488 732 aa17.52■□□□□ 0.39
CCDC47-201ENST00000225726 AATFQ9NY61 560 aaKnown RBP eCLIP17.52■□□□□ 0.39
CCDC47-201ENST00000225726 LAMB1P07942 1786 aa17.52■□□□□ 0.39
CCDC47-201ENST00000225726 SH2B2O14492 632 aaPredicted RBP17.51■□□□□ 0.39
CCDC47-201ENST00000225726 GSE1Q14687 1217 aa17.51■□□□□ 0.39
CCDC47-201ENST00000225726 ANGEL1Q9UNK9 670 aaKnown RBP17.51■□□□□ 0.39
CCDC47-201ENST00000225726 TACC3Q9Y6A5 838 aa17.51■□□□□ 0.39
CCDC47-201ENST00000225726 ZNF622Q969S3 477 aaKnown RBP eCLIP17.51■□□□□ 0.395e-8■■■■□ 19.9
CCDC47-201ENST00000225726 COA1Q9GZY4 146 aa17.51■□□□□ 0.39
CCDC47-201ENST00000225726 NAP1L2Q9ULW6 460 aaPredicted RBP17.51■□□□□ 0.39
CCDC47-201ENST00000225726 KLF18A0A0U1RQI7 1052 aa17.51■□□□□ 0.39
CCDC47-201ENST00000225726 DPP8Q6V1X1 898 aaPredicted RBP17.51■□□□□ 0.39
CCDC47-201ENST00000225726 NSUN7Q8NE18 718 aaKnown RBP17.51■□□□□ 0.39
CCDC47-201ENST00000225726 TBC1D22AQ8WUA7 517 aa17.51■□□□□ 0.39
CCDC47-201ENST00000225726 LMBRD1Q9NUN5 540 aa17.51■□□□□ 0.39
CCDC47-201ENST00000225726 ATP6V1DQ9Y5K8 247 aa17.51■□□□□ 0.39
CCDC47-201ENST00000225726 JAK2O60674 1132 aa17.5■□□□□ 0.39
CCDC47-201ENST00000225726 LDHCP07864 332 aa17.5■□□□□ 0.39
CCDC47-201ENST00000225726 HMGN5P82970 282 aaKnown RBP17.5■□□□□ 0.39
CCDC47-201ENST00000225726 ATP8A2Q9NTI2 1148 aa17.5■□□□□ 0.39
CCDC47-201ENST00000225726 FAM205AQ6ZU69 1335 aa17.5■□□□□ 0.39
CCDC47-201ENST00000225726 BAZ2AQ9UIF9 1905 aaKnown RBP17.5■□□□□ 0.39
CCDC47-201ENST00000225726 DTNBO60941 627 aa17.5■□□□□ 0.39
CCDC47-201ENST00000225726 CCT2P78371 535 aaKnown RBP17.5■□□□□ 0.39
CCDC47-201ENST00000225726 DEFB132Q7Z7B7 95 aa17.5■□□□□ 0.39
CCDC47-201ENST00000225726 NKX2-3Q8TAU0 364 aa17.5■□□□□ 0.39
CCDC47-201ENST00000225726 MTA3Q9BTC8 594 aa17.49■□□□□ 0.39
CCDC47-201ENST00000225726 INCENPQ9NQS7 918 aa17.49■□□□□ 0.39
CCDC47-201ENST00000225726 VPS37CA5D8V6 355 aaPredicted RBP17.49■□□□□ 0.39
CCDC47-201ENST00000225726 GOLGA8BA8MQT2 603 aa17.49■□□□□ 0.39
CCDC47-201ENST00000225726 MINDY4BA8MYZ0 360 aa17.49■□□□□ 0.39
CCDC47-201ENST00000225726 KDM4AO75164 1064 aa17.49■□□□□ 0.39
CCDC47-201ENST00000225726 CTDNEP1O95476 244 aa17.49■□□□□ 0.39
CCDC47-201ENST00000225726 GRIK5Q16478 980 aa17.49■□□□□ 0.39
CCDC47-201ENST00000225726 IGDCC4Q8TDY8 1250 aa17.49■□□□□ 0.39
CCDC47-201ENST00000225726 MYH2Q9UKX2 1941 aa17.49■□□□□ 0.39
CCDC47-201ENST00000225726 MROH7-TTC4A0A0A0MT08 1334 aa17.48■□□□□ 0.39
CCDC47-201ENST00000225726 CERS3Q8IU89 383 aa17.48■□□□□ 0.39
CCDC47-201ENST00000225726 ZC3H12CQ9C0D7 883 aaKnown RBP17.48■□□□□ 0.39
CCDC47-201ENST00000225726 ZSWIM5Q9P217 1185 aa17.48■□□□□ 0.39
CCDC47-201ENST00000225726 KIF3AQ9Y496 699 aa17.48■□□□□ 0.39
CCDC47-201ENST00000225726 PTPDC1A2A3K4 754 aa17.48■□□□□ 0.39
CCDC47-201ENST00000225726 PCP11498 1178 aaKnown RBP17.48■□□□□ 0.39
CCDC47-201ENST00000225726 CTR9Q6PD62 1173 aa17.48■□□□□ 0.39
CCDC47-201ENST00000225726 OLFM4Q6UX06 510 aa17.48■□□□□ 0.39
CCDC47-201ENST00000225726 EYA3Q99504 573 aa17.48■□□□□ 0.39
CCDC47-201ENST00000225726 NOL10Q9BSC4 688 aaKnown RBP17.48■□□□□ 0.39
CCDC47-201ENST00000225726 NCOA5Q9HCD5 579 aaKnown RBP17.48■□□□□ 0.39
CCDC47-201ENST00000225726 DCP1AQ9NPI6 582 aaPredicted RBP17.48■□□□□ 0.39
CCDC47-201ENST00000225726 HPS5Q9UPZ3 1129 aa17.48■□□□□ 0.39
CCDC47-201ENST00000225726 RIMBP2O15034 1052 aa17.48■□□□□ 0.39
CCDC47-201ENST00000225726 DHX16O60231 1041 aaKnown RBP17.48■□□□□ 0.39
CCDC47-201ENST00000225726 BAG3O95817 575 aa17.48■□□□□ 0.39
CCDC47-201ENST00000225726 PPP4CP60510 307 aa17.48■□□□□ 0.39
CCDC47-201ENST00000225726 CNKSR1Q969H4 720 aa17.48■□□□□ 0.39
CCDC47-201ENST00000225726 LIFRP42702 1097 aa17.47■□□□□ 0.39
CCDC47-201ENST00000225726 TMEM67Q5HYA8 995 aa17.47■□□□□ 0.39
CCDC47-201ENST00000225726 FAM184AQ8NB25 1140 aa17.47■□□□□ 0.39
CCDC47-201ENST00000225726 CHAMP1Q96JM3 812 aa17.47■□□□□ 0.39
CCDC47-201ENST00000225726 LY9Q9HBG7 655 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 194.9 ms