RNA–Protein interactions for RNA: ENST00000221784.8

PDCD5-201, Transcript of programmed cell death 5, humanhuman

TSL 3

Gene PDCD5, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-201ENST00000221784 TFCP2Q12800 502 aa17.12■□□□□ 0.33
PDCD5-201ENST00000221784 CRHR2Q13324 411 aa17.12■□□□□ 0.33
PDCD5-201ENST00000221784 CDC42EP5Q6NZY7 148 aa17.12■□□□□ 0.33
PDCD5-201ENST00000221784 MIER1Q8N108 512 aa17.12■□□□□ 0.33
PDCD5-201ENST00000221784 ZGPATQ8N5A5 531 aaKnown RBP17.12■□□□□ 0.33
PDCD5-201ENST00000221784 OTUD5Q96G74 571 aa17.12■□□□□ 0.33
PDCD5-201ENST00000221784 WRNIP1Q96S55 665 aa17.12■□□□□ 0.33
PDCD5-201ENST00000221784 USP40Q9NVE5 1235 aa17.12■□□□□ 0.33
PDCD5-201ENST00000221784 TNNQ9UQP3 1299 aa17.12■□□□□ 0.33
PDCD5-201ENST00000221784 CCL15-CCL14A0A0B4J2E2 113 aa17.11■□□□□ 0.33
PDCD5-201ENST00000221784 A0A1B0GUL7 405 aa17.11■□□□□ 0.33
PDCD5-201ENST00000221784 SPDYE5A6NIY4 337 aa17.11■□□□□ 0.33
PDCD5-201ENST00000221784 TCP10Q12799 353 aa17.11■□□□□ 0.33
PDCD5-201ENST00000221784 CCL15Q16663 113 aa17.11■□□□□ 0.33
PDCD5-201ENST00000221784 MIGA2Q7L4E1 593 aa17.11■□□□□ 0.33
PDCD5-201ENST00000221784 ERO1BQ86YB8 467 aa17.11■□□□□ 0.33
PDCD5-201ENST00000221784 BRI3BPQ8WY22 251 aa17.11■□□□□ 0.33
PDCD5-201ENST00000221784 ZKSCAN4Q969J2 545 aaPredicted RBP17.11■□□□□ 0.33
PDCD5-201ENST00000221784 XAGE2Q96GT9 111 aa17.11■□□□□ 0.33
PDCD5-201ENST00000221784 ZNF341Q9BYN7 854 aa17.11■□□□□ 0.33
PDCD5-201ENST00000221784 TRIM17Q9Y577 477 aa17.11■□□□□ 0.33
PDCD5-201ENST00000221784 SNCAIPQ9Y6H5 919 aa17.11■□□□□ 0.33
PDCD5-201ENST00000221784 HNRNPUQ00839 825 aaKnown RBP eCLIP17.1■□□□□ 0.33
PDCD5-201ENST00000221784 NFIAQ12857 509 aa17.1■□□□□ 0.33
PDCD5-201ENST00000221784 RASGRF1Q13972 1273 aa17.1■□□□□ 0.33
PDCD5-201ENST00000221784 MVPQ14764 893 aaKnown RBP17.1■□□□□ 0.33
PDCD5-201ENST00000221784 ZKSCAN2Q63HK3 967 aa17.1■□□□□ 0.33
PDCD5-201ENST00000221784 ERO1AQ96HE7 468 aa17.1■□□□□ 0.33
PDCD5-201ENST00000221784 NEUROD6Q96NK8 337 aa17.1■□□□□ 0.33
PDCD5-201ENST00000221784 RPAP1Q9BWH6 1393 aaPredicted RBP17.1■□□□□ 0.33
PDCD5-201ENST00000221784 SP3Q02447 781 aa17.09■□□□□ 0.33
PDCD5-201ENST00000221784 SPTY2D1Q68D10 685 aaPredicted RBP17.09■□□□□ 0.33
PDCD5-201ENST00000221784 OTOP1Q7RTM1 612 aa17.09■□□□□ 0.33
PDCD5-201ENST00000221784 ZFYVE28Q9HCC9 887 aa17.09■□□□□ 0.33
PDCD5-201ENST00000221784 ABCF2Q9UG63 623 aa17.09■□□□□ 0.33
PDCD5-201ENST00000221784 ARAP2Q8WZ64 1704 aa17.09■□□□□ 0.33
PDCD5-201ENST00000221784 PDS5AQ29RF7 1337 aaKnown RBP17.08■□□□□ 0.32
PDCD5-201ENST00000221784 CETPP11597 493 aa17.08■□□□□ 0.32
PDCD5-201ENST00000221784 G3BP1Q13283 466 aaKnown RBP eCLIP17.08■□□□□ 0.32
PDCD5-201ENST00000221784 TAF1CQ15572 869 aaPredicted RBP17.08■□□□□ 0.32
PDCD5-201ENST00000221784 DIEXFQ68CQ4 756 aaKnown RBP17.08■□□□□ 0.32
PDCD5-201ENST00000221784 DZIP1Q86YF9 867 aaKnown RBP17.08■□□□□ 0.32
PDCD5-201ENST00000221784 SLF2Q8IX21 1173 aa17.08■□□□□ 0.32
PDCD5-201ENST00000221784 FAM43AQ8N2R8 423 aa17.08■□□□□ 0.32
PDCD5-201ENST00000221784 TMEM57Q8N5G2 664 aa17.08■□□□□ 0.32
PDCD5-201ENST00000221784 FAM198AQ9UFP1 575 aa17.08■□□□□ 0.32
PDCD5-201ENST00000221784 PNMA6EA0A0J9YXQ4 647 aa17.07■□□□□ 0.32
PDCD5-201ENST00000221784 IRF6O14896 467 aa17.07■□□□□ 0.32
PDCD5-201ENST00000221784 WDHD1O75717 1129 aaPredicted RBP17.07■□□□□ 0.32
PDCD5-201ENST00000221784 INPP5BP32019 993 aa17.07■□□□□ 0.32
PDCD5-201ENST00000221784 PPATQ06203 517 aa17.07■□□□□ 0.32
PDCD5-201ENST00000221784 PPIL2Q13356 520 aa17.07■□□□□ 0.32
PDCD5-201ENST00000221784 SNAPC2Q13487 334 aa17.07■□□□□ 0.32
PDCD5-201ENST00000221784 GORABQ5T7V8 394 aa17.07■□□□□ 0.32
PDCD5-201ENST00000221784 CD99L2Q8TCZ2 262 aa17.07■□□□□ 0.32
PDCD5-201ENST00000221784 FAM163AQ96GL9 167 aaPredicted RBP17.07■□□□□ 0.32
PDCD5-201ENST00000221784 EFCC1Q9HA90 598 aa17.07■□□□□ 0.32
PDCD5-201ENST00000221784 ZNF112Q9UJU3 913 aa17.07■□□□□ 0.32
PDCD5-201ENST00000221784 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.07■□□□□ 0.32
PDCD5-201ENST00000221784 GAKO14976 1311 aa17.06■□□□□ 0.32
PDCD5-201ENST00000221784 ZFPM1Q8IX07 1006 aa17.06■□□□□ 0.32
PDCD5-201ENST00000221784 IDI2Q9BXS1 227 aa17.06■□□□□ 0.32
PDCD5-201ENST00000221784 ENTPD3O75355 529 aa17.05■□□□□ 0.32
PDCD5-201ENST00000221784 RGS3P49796 1198 aa17.05■□□□□ 0.32
PDCD5-201ENST00000221784 ARHGEF6Q15052 776 aa17.05■□□□□ 0.32
PDCD5-201ENST00000221784 ERICH6Q7L0X2 663 aa17.05■□□□□ 0.32
PDCD5-201ENST00000221784 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
PDCD5-201ENST00000221784 HMG20BQ9P0W2 317 aa17.05■□□□□ 0.32
PDCD5-201ENST00000221784 PTPN22Q9Y2R2 807 aa17.05■□□□□ 0.32
PDCD5-201ENST00000221784 BTBD19C9JJ37 291 aa17.04■□□□□ 0.32
PDCD5-201ENST00000221784 SPATA5Q8NB90 893 aa17.04■□□□□ 0.32
PDCD5-201ENST00000221784 BTDP43251 543 aa17.03■□□□□ 0.32
PDCD5-201ENST00000221784 ATP8B2P98198 1209 aa17.03■□□□□ 0.32
PDCD5-201ENST00000221784 MECOMQ03112 1051 aa17.03■□□□□ 0.32
PDCD5-201ENST00000221784 POLA2Q14181 598 aa17.03■□□□□ 0.32
PDCD5-201ENST00000221784 NOL9Q5SY16 702 aaKnown RBP17.03■□□□□ 0.32
PDCD5-201ENST00000221784 ZSCAN29Q8IWY8 852 aaPredicted RBP17.03■□□□□ 0.32
PDCD5-201ENST00000221784 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
PDCD5-201ENST00000221784 MROH7-TTC4A0A0A0MT08 1334 aa17.02■□□□□ 0.32
PDCD5-201ENST00000221784 GPR75-ASB3A0A0A6YYF3 556 aa17.02■□□□□ 0.32
PDCD5-201ENST00000221784 TLR2O60603 784 aa17.02■□□□□ 0.32
PDCD5-201ENST00000221784 LDHCP07864 332 aa17.02■□□□□ 0.32
PDCD5-201ENST00000221784 UQCRFS1P1P0C7P4 283 aa17.02■□□□□ 0.32
PDCD5-201ENST00000221784 ARID4AP29374 1257 aaPredicted RBP17.02■□□□□ 0.32
PDCD5-201ENST00000221784 GSTO1P78417 241 aa17.02■□□□□ 0.32
PDCD5-201ENST00000221784 TBC1D9Q6ZT07 1266 aa17.02■□□□□ 0.32
PDCD5-201ENST00000221784 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.02■□□□□ 0.32
PDCD5-201ENST00000221784 KCNH4Q9UQ05 1017 aa17.02■□□□□ 0.32
PDCD5-201ENST00000221784 CAP1Q01518 475 aa17.01■□□□□ 0.31
PDCD5-201ENST00000221784 OS9Q13438 667 aaPredicted RBP17.01■□□□□ 0.31
PDCD5-201ENST00000221784 PI16Q6UXB8 463 aa17.01■□□□□ 0.31
PDCD5-201ENST00000221784 SH3BP5LQ7L8J4 393 aa17.01■□□□□ 0.31
PDCD5-201ENST00000221784 SSH3Q8TE77 659 aa17.01■□□□□ 0.31
PDCD5-201ENST00000221784 GPR108Q9NPR9 543 aa17.01■□□□□ 0.31
PDCD5-201ENST00000221784 OTOFQ9HC10 1997 aa17■□□□□ 0.31
PDCD5-201ENST00000221784 DDTLA6NHG4 134 aaPredicted RBP17■□□□□ 0.31
PDCD5-201ENST00000221784 PHF20L1A8MW92 1017 aa17■□□□□ 0.31
PDCD5-201ENST00000221784 ZBTB7BO15156 539 aaPredicted RBP17■□□□□ 0.31
PDCD5-201ENST00000221784 SURF6O75683 361 aaKnown RBP17■□□□□ 0.31
PDCD5-201ENST00000221784 RHBDL3P58872 404 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms