RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 TRAPPC10P48553 1259 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 CNNM4Q6P4Q7 775 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 LPIN2Q92539 896 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 CALR3Q96L12 384 aaKnown RBP6.5□□□□□ -1.37
CBX5-201ENST00000209875 NT5C3AQ9H0P0 336 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 CUEDC2Q9H467 287 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 IKBKGQ9Y6K9 419 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 UNC13AQ9UPW8 1703 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 CARMIL3Q8ND23 1372 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 GSTTP1A0A1W2PQM5 241 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 LAD1O00515 517 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 GOLGA1Q92805 767 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 STAP2Q9UGK3 403 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 FEZ2Q9UHY8 353 aaPredicted RBP6.5□□□□□ -1.37
CBX5-201ENST00000209875 PTCD1O75127 700 aaKnown RBP6.5□□□□□ -1.37
CBX5-201ENST00000209875 RBM17Q96I25 401 aaKnown RBP6.5□□□□□ -1.37
CBX5-201ENST00000209875 TSNARE1Q96NA8 513 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 MTUS1Q9ULD2 1270 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 CTAGE9A4FU28 777 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 CIAO1O76071 339 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 ALDH3A1P30838 453 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 TMTC1Q8IUR5 882 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 GOLGA5Q8TBA6 731 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 THUMPD2Q9BTF0 503 aaKnown RBP6.5□□□□□ -1.37
CBX5-201ENST00000209875 MTRF1LQ9UGC7 380 aaKnown RBP6.5□□□□□ -1.37
CBX5-201ENST00000209875 SLC4A4Q9Y6R1 1079 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 KDRP35968 1356 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 HAUS2Q9NVX0 235 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 ATP10DQ9P241 1426 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 SOS2Q07890 1332 aaPredicted RBP6.5□□□□□ -1.37
CBX5-201ENST00000209875 SPDYE3A6NKU9 549 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 PPFIA3O75145 1194 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 RNF187Q5TA31 235 aaPredicted RBP6.5□□□□□ -1.37
CBX5-201ENST00000209875 CCDC65Q8IXS2 484 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 RNF168Q8IYW5 571 aaPredicted RBP6.5□□□□□ -1.37
CBX5-201ENST00000209875 SLC26A6Q9BXS9 759 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 ARPP21Q9UBL0 812 aaPredicted RBP6.5□□□□□ -1.37
CBX5-201ENST00000209875 SKILP12757 684 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 CYP7A1P22680 504 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 RPS6KB1P23443 525 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 ZNF790Q6PG37 636 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 PHF23Q9BUL5 403 aaPredicted RBP6.5□□□□□ -1.37
CBX5-201ENST00000209875 FOSBP53539 338 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 NOLC1Q14978 699 aaKnown RBP eCLIP6.5□□□□□ -1.375e-6■■■□□ 18.8
CBX5-201ENST00000209875 GRIPAP1Q4V328 841 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 TRMT2AQ8IZ69 625 aaKnown RBP6.5□□□□□ -1.37
CBX5-201ENST00000209875 C8orf58Q8NAV2 365 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 ERO1AQ96HE7 468 aa6.5□□□□□ -1.37
CBX5-201ENST00000209875 TMC6Q7Z403 805 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 CCDC42Q96M95 316 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 ZBTB3Q9H5J0 574 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 LUC7L2Q9Y383 392 aaKnown RBP6.49□□□□□ -1.37
CBX5-201ENST00000209875 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.49□□□□□ -1.37
CBX5-201ENST00000209875 RTCBQ9Y3I0 505 aaKnown RBP6.49□□□□□ -1.37
CBX5-201ENST00000209875 SARNPP82979 210 aaKnown RBP6.49□□□□□ -1.37
CBX5-201ENST00000209875 HDXQ7Z353 690 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 MIS12Q9H081 205 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 ABCC12Q96J65 1359 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 EFCAB6Q5THR3 1501 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 APBA1Q02410 837 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.49□□□□□ -1.37
CBX5-201ENST00000209875 CLSTN2Q9H4D0 955 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 ANGEL1Q9UNK9 670 aaKnown RBP6.49□□□□□ -1.37
CBX5-201ENST00000209875 ARHGAP6O43182 974 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 CAPN2P17655 700 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 VAV2P52735 878 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 CCDC6Q16204 474 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 DZIP3Q86Y13 1208 aaKnown RBP6.49□□□□□ -1.37
CBX5-201ENST00000209875 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.49□□□□□ -1.373e-6■■■■■ 38.3
CBX5-201ENST00000209875 MAP4K4O95819 1239 aaPredicted RBP6.49□□□□□ -1.37
CBX5-201ENST00000209875 RRAGBQ5VZM2 374 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 SLC52A2Q9HAB3 445 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 SAMD15Q9P1V8 674 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 MAGI3Q5TCQ9 1506 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 XPCQ01831 940 aaPredicted RBP6.49□□□□□ -1.37
CBX5-201ENST00000209875 ORC2Q13416 577 aaPredicted RBP6.49□□□□□ -1.37
CBX5-201ENST00000209875 CDK12Q9NYV4 1490 aaPredicted RBP6.49□□□□□ -1.37
CBX5-201ENST00000209875 ATP8B1O43520 1251 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 GNG11P61952 73 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 CCDC14Q49A88 953 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 DTHD1Q6ZMT9 781 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 VCXQ9H320 206 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 PHLPP2Q6ZVD8 1323 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 A0A1W2PQ27 194 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 A0A1W2PQ64 194 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 A0A1W2PQD8 194 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 TYRO3Q06418 890 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 NMIQ13287 307 aaPredicted RBP6.49□□□□□ -1.37
CBX5-201ENST00000209875 SETDB1Q15047 1291 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 CACNA2D3Q8IZS8 1091 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 CARD14Q9BXL6 1004 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 GIGYF1O75420 1035 aaPredicted RBP6.49□□□□□ -1.37
CBX5-201ENST00000209875 SKIDA1Q1XH10 827 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 MICU3Q86XE3 530 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 SMARCC2Q8TAQ2 1214 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 PSMD1Q99460 953 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 FAM114A2Q9NRY5 505 aa6.49□□□□□ -1.37
CBX5-201ENST00000209875 PTPDC1A2A3K4 754 aa6.48□□□□□ -1.37
CBX5-201ENST00000209875 UBE3CQ15386 1083 aa6.48□□□□□ -1.37
CBX5-201ENST00000209875 TNNI3KQ59H18 835 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms