RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Ubxn2aQ99KJ0 258 aa23.76■■□□□ 1.39
Lig3-204ENSMUST00000131537 Zbed3Q9D0L1 228 aa23.76■■□□□ 1.39
Lig3-204ENSMUST00000131537 Ercc3P49135 783 aa23.75■■□□□ 1.39
Lig3-204ENSMUST00000131537 Jakmip1Q8BVL9 626 aa23.75■■□□□ 1.39
Lig3-204ENSMUST00000131537 Rad50P70388 1312 aa23.75■■□□□ 1.39
Lig3-204ENSMUST00000131537 NapbP28663 298 aa23.75■■□□□ 1.39
Lig3-204ENSMUST00000131537 Myo1bP46735 1107 aa23.75■■□□□ 1.39
Lig3-204ENSMUST00000131537 LeprP48356 1162 aa23.75■■□□□ 1.39
Lig3-204ENSMUST00000131537 Ppm1gQ61074 542 aa23.75■■□□□ 1.39
Lig3-204ENSMUST00000131537 MlphQ91V27 590 aa23.75■■□□□ 1.39
Lig3-204ENSMUST00000131537 Ccdc39Q9D5Y1 937 aa23.75■■□□□ 1.39
Lig3-204ENSMUST00000131537 Sept14Q9DA97 430 aa23.75■■□□□ 1.39
Lig3-204ENSMUST00000131537 Rai14Q9EP71 979 aaKnown RBP23.75■■□□□ 1.39
Lig3-204ENSMUST00000131537 Tbc1d32Q3URV1 1296 aa23.74■■□□□ 1.39
Lig3-204ENSMUST00000131537 Pramel6Q810Y9 485 aa23.74■■□□□ 1.39
Lig3-204ENSMUST00000131537 Flvcr1B2RXV4 560 aa23.73■■□□□ 1.39
Lig3-204ENSMUST00000131537 Anp32aO35381 247 aa23.73■■□□□ 1.39
Lig3-204ENSMUST00000131537 Prl7a2O54831 253 aa23.73■■□□□ 1.39
Lig3-204ENSMUST00000131537 DnttP09838 530 aa23.73■■□□□ 1.39
Lig3-204ENSMUST00000131537 Tmed8Q3UHI4 326 aa23.73■■□□□ 1.39
Lig3-204ENSMUST00000131537 Klhdc9Q3USL1 350 aa23.73■■□□□ 1.39
Lig3-204ENSMUST00000131537 Hand2Q61039 217 aa23.73■■□□□ 1.39
Lig3-204ENSMUST00000131537 HelbQ6NVF4 1074 aa23.73■■□□□ 1.39
Lig3-204ENSMUST00000131537 Acap3Q6NXL5 833 aa23.73■■□□□ 1.39
Lig3-204ENSMUST00000131537 Borcs6Q9D6W8 360 aa23.73■■□□□ 1.39
Lig3-204ENSMUST00000131537 Tfip11Q9ERA6 838 aaKnown RBP23.73■■□□□ 1.39
Lig3-204ENSMUST00000131537 Dennd3A2RT67 1274 aa23.72■■□□□ 1.39
Lig3-204ENSMUST00000131537 Ces1aE9PYP1 563 aa23.72■■□□□ 1.39
Lig3-204ENSMUST00000131537 Tigd5Q499M4 642 aa23.72■■□□□ 1.39
Lig3-204ENSMUST00000131537 Ctr9Q62018 1173 aaKnown RBP23.72■■□□□ 1.39
Lig3-204ENSMUST00000131537 DaglaQ6WQJ1 1044 aa23.72■■□□□ 1.39
Lig3-204ENSMUST00000131537 Usp44Q8C2S0 711 aa23.72■■□□□ 1.39
Lig3-204ENSMUST00000131537 Rassf8Q8CJ96 419 aa23.72■■□□□ 1.39
Lig3-204ENSMUST00000131537 Ms4a2P20490 235 aa23.71■■□□□ 1.39
Lig3-204ENSMUST00000131537 Myh6Q02566 1938 aaKnown RBP23.71■■□□□ 1.39
Lig3-204ENSMUST00000131537 Prss51A0A286YDY8 319 aa23.7■■□□□ 1.39
Lig3-204ENSMUST00000131537 1700003F12RikA2AKE5 210 aa23.7■■□□□ 1.39
Lig3-204ENSMUST00000131537 Eef2P58252 858 aaKnown RBP23.7■■□□□ 1.39
Lig3-204ENSMUST00000131537 Ehmt1Q5DW34 1296 aa23.7■■□□□ 1.39
Lig3-204ENSMUST00000131537 Trmt2aQ8BNV1 574 aaKnown RBP23.7■■□□□ 1.39
Lig3-204ENSMUST00000131537 Yipf1Q91VU1 306 aa23.7■■□□□ 1.39
Lig3-204ENSMUST00000131537 Eaf2Q91ZD6 262 aa23.7■■□□□ 1.39
Lig3-204ENSMUST00000131537 Col24a1Q30D77 1733 aa23.7■■□□□ 1.38
Lig3-204ENSMUST00000131537 NrapQ80XB4 1728 aa23.7■■□□□ 1.38
Lig3-204ENSMUST00000131537 Mex3cQ05A36 652 aaKnown RBP23.7■■□□□ 1.38
Lig3-204ENSMUST00000131537 Prpf38aQ4FK66 312 aaKnown RBP23.7■■□□□ 1.38
Lig3-204ENSMUST00000131537 GnptabQ69ZN6 1235 aa23.7■■□□□ 1.38
Lig3-204ENSMUST00000131537 Abl1P00520 1123 aa23.69■■□□□ 1.38
Lig3-204ENSMUST00000131537 Tex2Q6ZPJ0 1128 aaKnown RBP23.69■■□□□ 1.38
Lig3-204ENSMUST00000131537 Shisa4Q8CA71 197 aa23.69■■□□□ 1.38
Lig3-204ENSMUST00000131537 Irf6P97431 467 aa23.68■■□□□ 1.38
Lig3-204ENSMUST00000131537 RubcnlQ3TD16 648 aa23.68■■□□□ 1.38
Lig3-204ENSMUST00000131537 Spata5Q3UMC0 893 aaKnown RBP23.68■■□□□ 1.38
Lig3-204ENSMUST00000131537 Ttc12Q8BW49 704 aa23.68■■□□□ 1.38
Lig3-204ENSMUST00000131537 Stac3Q8BZ71 360 aa23.68■■□□□ 1.38
Lig3-204ENSMUST00000131537 Atxn7Q8R4I1 867 aa23.68■■□□□ 1.38
Lig3-204ENSMUST00000131537 Tsc2Q61037 1814 aa23.68■■□□□ 1.38
Lig3-204ENSMUST00000131537 Rnf123Q5XPI3 1314 aa23.68■■□□□ 1.38
Lig3-204ENSMUST00000131537 MccE9PWI3 1003 aa23.68■■□□□ 1.38
Lig3-204ENSMUST00000131537 Gtpbp6Q3U6U5 514 aa23.68■■□□□ 1.38
Lig3-204ENSMUST00000131537 Klrg2Q3UM83 387 aa23.68■■□□□ 1.38
Lig3-204ENSMUST00000131537 Spty2d1Q68FG3 682 aa23.68■■□□□ 1.38
Lig3-204ENSMUST00000131537 Olfr118Q7TRJ6 321 aa23.68■■□□□ 1.38
Lig3-204ENSMUST00000131537 Ythdc1E9Q5K9 736 aaKnown RBP23.67■■□□□ 1.38
Lig3-204ENSMUST00000131537 Q3UJP5 209 aa23.67■■□□□ 1.38
Lig3-204ENSMUST00000131537 Tmem39bQ810L4 492 aa23.67■■□□□ 1.38
Lig3-204ENSMUST00000131537 HibadhQ99L13 335 aaKnown RBP23.67■■□□□ 1.38
Lig3-204ENSMUST00000131537 Slc27a3O88561 667 aa23.66■■□□□ 1.38
Lig3-204ENSMUST00000131537 Fam178bQ24JP3 464 aa23.66■■□□□ 1.38
Lig3-204ENSMUST00000131537 Fam170aQ66LM6 333 aa23.66■■□□□ 1.38
Lig3-204ENSMUST00000131537 Clrn2B2RVW2 232 aa23.65■■□□□ 1.38
Lig3-204ENSMUST00000131537 Psen2Q61144 448 aa23.65■■□□□ 1.38
Lig3-204ENSMUST00000131537 PaoxQ8C0L6 504 aa23.65■■□□□ 1.38
Lig3-204ENSMUST00000131537 Dynll2Q9D0M5 89 aa23.65■■□□□ 1.38
Lig3-204ENSMUST00000131537 Fzd9Q9R216 592 aa23.65■■□□□ 1.38
Lig3-204ENSMUST00000131537 Nova2D3YVV7 556 aaKnown RBP23.65■■□□□ 1.38
Lig3-204ENSMUST00000131537 Kif20aP97329 887 aa23.65■■□□□ 1.38
Lig3-204ENSMUST00000131537 Ncbp1Q3UYV9 790 aaKnown RBP23.65■■□□□ 1.38
Lig3-204ENSMUST00000131537 Rnf20Q5DTM8 973 aa23.65■■□□□ 1.38
Lig3-204ENSMUST00000131537 Ttll4Q80UG8 1193 aa23.65■■□□□ 1.38
Lig3-204ENSMUST00000131537 ImmtQ8CAQ8 757 aaKnown RBP23.65■■□□□ 1.38
Lig3-204ENSMUST00000131537 Pappa2E9PZ87 1789 aa23.64■■□□□ 1.38
Lig3-204ENSMUST00000131537 Slc4a9E9PUP3 929 aa23.64■■□□□ 1.37
Lig3-204ENSMUST00000131537 Pde11aP0C1Q2 933 aa23.64■■□□□ 1.37
Lig3-204ENSMUST00000131537 Tnni2P13412 182 aa23.64■■□□□ 1.37
Lig3-204ENSMUST00000131537 Lgr6Q3UVD5 967 aa23.64■■□□□ 1.37
Lig3-204ENSMUST00000131537 Tbc1d9bQ5SVR0 1263 aa23.64■■□□□ 1.37
Lig3-204ENSMUST00000131537 PdgfdQ925I7 370 aa23.64■■□□□ 1.37
Lig3-204ENSMUST00000131537 Igf2bp3Q9CPN8 579 aaKnown RBP23.64■■□□□ 1.37
Lig3-204ENSMUST00000131537 Efcc1Q9JJF6 558 aa23.64■■□□□ 1.37
Lig3-204ENSMUST00000131537 Usp42B2RQC2 1324 aaKnown RBP23.64■■□□□ 1.37
Lig3-204ENSMUST00000131537 Vcam1P29533 739 aa23.63■■□□□ 1.37
Lig3-204ENSMUST00000131537 Cnot6lQ8VEG6 555 aa23.63■■□□□ 1.37
Lig3-204ENSMUST00000131537 VrtnQ3SYK4 740 aa23.63■■□□□ 1.37
Lig3-204ENSMUST00000131537 Angel2Q8K1C0 544 aa23.63■■□□□ 1.37
Lig3-204ENSMUST00000131537 Gbp7Q91Z40 638 aa23.63■■□□□ 1.37
Lig3-204ENSMUST00000131537 Zkscan16A2ALW2 728 aa23.62■■□□□ 1.37
Lig3-204ENSMUST00000131537 Fam186bD3Z420 943 aa23.62■■□□□ 1.37
Lig3-204ENSMUST00000131537 Il7P10168 154 aa23.62■■□□□ 1.37
Lig3-204ENSMUST00000131537 Tmc4Q7TQ65 694 aa23.62■■□□□ 1.37
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms