RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Fchsd2Q3USJ8 740 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 RalylQ8BTF8 293 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Skor1Q8BX46 964 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Evc2Q8K1G2 1220 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Sclt1G5E861 688 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Ipo5Q8BKC5 1097 aaKnown RBP8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Trpa1Q8BLA8 1125 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Vps33aQ9D2N9 598 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Stag1Q9D3E6 1258 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 MajinQ9D992 256 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Ptpn23Q6PB44 1692 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Gng11P61953 73 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Serpinb6Q60854 378 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Slfnl1Q8BHW9 410 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Slc5a4aQ9ET37 656 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Aox2Q5SGK3 1345 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Znf568E9PYI1 671 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Q3TQI7 289 aaKnown RBP8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Ppp1r12cQ3UMT1 782 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Ccdc85aQ5SP85 500 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Luc7l3Q5SUF2 432 aaKnown RBP8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Jmjd4Q8BFT6 427 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Rassf2Q8BMS9 326 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Anapc5Q8BTZ4 740 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Afg3l2Q8JZQ2 802 aaKnown RBP8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Erlin1Q91X78 346 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Ccdc91Q9D8L5 442 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Wdr33Q8K4P0 1330 aaKnown RBP8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Zscan20B2KFW1 1030 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Taf4bG5E8Z2 855 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Specc1lQ2KN98 1118 aaKnown RBP8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Rps6ka6Q7TPS0 764 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Dcaf5Q80T85 946 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Q8C5K5 320 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Frat2Q8K025 231 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Gle1Q8R322 699 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 IqcdQ9D3V1 458 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Ccdc121E9Q6D3 323 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Gm3415J3QMS8 315 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Syde2E9PUP1 1314 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Fam81bA0A140LI28 432 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Ccdc162pQ0VG85 912 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 SkilQ60665 675 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Hps6Q8BLY7 805 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Kirrel3Q8BR86 778 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Frmd4bQ920B0 1035 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Gnl2Q99LH1 728 aaKnown RBP8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Tex19.1Q99MV2 351 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Six6os1Q9CTN5 574 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Gkap1Q9JMB0 366 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 RpgrQ9R0X5 1001 aa8.12□□□□□ -1.11
Chm-202ENSMUST00000113388 Ccdc110Q3V125 848 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Foxd4Q60688 444 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Dtnbp1Q91WZ8 352 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Klhl10Q9D5V2 608 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Mx2Q9WVP9 655 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Phlpp2Q8BXA7 1320 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 ZfxP17012 799 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Zc3h18Q0P678 948 aaKnown RBP8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Slc39a6Q8C145 765 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Gramd4Q8CB44 633 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Znf830Q8R1N0 363 aaKnown RBP8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Usp16Q99LG0 825 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Mst1rQ62190 1378 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Cplx2P84086 134 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Usp11Q99K46 921 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Ppil4Q9CXG3 492 aaKnown RBP8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Get4Q9D1H7 327 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Ifi35Q9D8C4 286 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Ahnak2E9PYB0 1738 aaKnown RBP8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Aplp1Q03157 653 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Klra5Q60652 266 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Ccdc148Q6P5U8 527 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Ccdc30Q8BVF4 654 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Kiaa0319lQ8K135 1048 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 PawrQ925B0 333 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Prc1Q99K43 603 aaKnown RBP8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 CenphQ9QYM8 241 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Snx1Q9WV80 522 aa8.11□□□□□ -1.11
Chm-202ENSMUST00000113388 Heatr4E9Q357 955 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Usp48Q3V0C5 1052 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Atp1a2Q6PIE5 1020 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Spata16Q8C636 571 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Tbx22Q8K402 517 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Rps6ka4Q9Z2B9 773 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Ksr2Q3UVC0 959 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 BcanQ61361 883 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Map2k2Q63932 401 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Secisbp2lQ6A098 1086 aaKnown RBP8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Kiaa1524Q8BWY9 907 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Ccdc12Q8R344 166 aaKnown RBP8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Znf24Q91VN1 368 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Nop2Q922K7 793 aaKnown RBP8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Adamtsl1Q8BLI0 1745 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Apba2P98084 750 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Gas2l2Q5SSG4 860 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Gngt1Q61012 74 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Prkab2Q6PAM0 271 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Tbc1d7Q9D0K0 293 aa8.1□□□□□ -1.11
Chm-202ENSMUST00000113388 Zbtb22Q9Z0G7 638 aa8.1□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms