RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Izumo3A6PWV3 263 aa18.06■□□□□ 0.48
Vcan-201ENSMUST00000109543 Prl7d1P04769 244 aa18.06■□□□□ 0.48
Vcan-201ENSMUST00000109543 Dbndd1Q9CZ00 160 aa18.06■□□□□ 0.48
Vcan-201ENSMUST00000109543 Stag1Q9D3E6 1258 aa18.06■□□□□ 0.48
Vcan-201ENSMUST00000109543 Lgr5Q9Z1P4 907 aa18.06■□□□□ 0.48
Vcan-201ENSMUST00000109543 Dennd3A2RT67 1274 aa18.06■□□□□ 0.48
Vcan-201ENSMUST00000109543 Tpm3P21107 285 aaKnown RBP18.06■□□□□ 0.48
Vcan-201ENSMUST00000109543 CebpzP53569 1052 aaKnown RBP18.06■□□□□ 0.48
Vcan-201ENSMUST00000109543 Hps6Q8BLY7 805 aa18.06■□□□□ 0.48
Vcan-201ENSMUST00000109543 Nrbp1Q99J45 535 aa18.06■□□□□ 0.48
Vcan-201ENSMUST00000109543 Mei1Q9D4I2 1268 aa18.06■□□□□ 0.48
Vcan-201ENSMUST00000109543 Syt10Q9R0N4 523 aa18.06■□□□□ 0.48
Vcan-201ENSMUST00000109543 Irs4Q9Z0Y7 1216 aa18.06■□□□□ 0.48
Vcan-201ENSMUST00000109543 Pdia4P08003 638 aaKnown RBP18.05■□□□□ 0.48
Vcan-201ENSMUST00000109543 Tnni2P13412 182 aa18.05■□□□□ 0.48
Vcan-201ENSMUST00000109543 Stat5bP42232 786 aa18.05■□□□□ 0.48
Vcan-201ENSMUST00000109543 CebpaP53566 359 aa18.05■□□□□ 0.48
Vcan-201ENSMUST00000109543 Gse1Q3U3C9 1213 aa18.05■□□□□ 0.48
Vcan-201ENSMUST00000109543 Golph3lQ8R088 285 aaKnown RBP18.05■□□□□ 0.48
Vcan-201ENSMUST00000109543 Slc5a4bQ91ZP4 660 aa18.05■□□□□ 0.48
Vcan-201ENSMUST00000109543 Foxp1P58462 705 aa18.05■□□□□ 0.48
Vcan-201ENSMUST00000109543 VmacQ8BP01 174 aa18.05■□□□□ 0.48
Vcan-201ENSMUST00000109543 Sf3b3Q921M3 1217 aaKnown RBP18.05■□□□□ 0.48
Vcan-201ENSMUST00000109543 Efcc1Q9JJF6 558 aa18.05■□□□□ 0.48
Vcan-201ENSMUST00000109543 Dpf1Q9QX66 387 aa18.05■□□□□ 0.48
Vcan-201ENSMUST00000109543 GakQ99KY4 1305 aa18.05■□□□□ 0.48
Vcan-201ENSMUST00000109543 NcapgE9PWG6 1004 aa18.04■□□□□ 0.48
Vcan-201ENSMUST00000109543 Pde11aP0C1Q2 933 aa18.04■□□□□ 0.48
Vcan-201ENSMUST00000109543 Lrrc43Q3V0L5 667 aa18.04■□□□□ 0.48
Vcan-201ENSMUST00000109543 Ttc12Q8BW49 704 aa18.04■□□□□ 0.48
Vcan-201ENSMUST00000109543 Sh3bp5lQ99LH9 392 aa18.04■□□□□ 0.48
Vcan-201ENSMUST00000109543 Gm43638A0A0J9YU36 694 aa18.04■□□□□ 0.48
Vcan-201ENSMUST00000109543 Epha2Q03145 977 aa18.04■□□□□ 0.48
Vcan-201ENSMUST00000109543 Rbm15bQ6PHZ5 887 aaKnown RBP18.04■□□□□ 0.48
Vcan-201ENSMUST00000109543 Slitrk3Q810B9 980 aa18.04■□□□□ 0.48
Vcan-201ENSMUST00000109543 WtapQ9ER69 396 aa18.04■□□□□ 0.48
Vcan-201ENSMUST00000109543 Tbc1d8Q9Z1A9 1134 aa18.04■□□□□ 0.48
Vcan-201ENSMUST00000109543 Nucb2P81117 420 aa18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Q3TYL0 343 aa18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Ckap2Q3V1H1 664 aa18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Ano6Q6P9J9 911 aa18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Dhx40Q6PE54 779 aaKnown RBP18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Srp68Q8BMA6 625 aaKnown RBP18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Paf1Q8K2T8 535 aa18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Cnpy3Q9DAU1 276 aa18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Acot9Q9R0X4 439 aaKnown RBP18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Ankrd63A2ARS0 390 aa18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Pfkfb1P70266 471 aa18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Krt40Q6IFX3 439 aa18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Nop2Q922K7 793 aaKnown RBP18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Ripk4Q9ERK0 786 aa18.03■□□□□ 0.48
Vcan-201ENSMUST00000109543 Ubn2Q80WC1 1314 aa18.02■□□□□ 0.48
Vcan-201ENSMUST00000109543 Eva1cP58659 440 aa18.02■□□□□ 0.48
Vcan-201ENSMUST00000109543 Rhbdl3P58873 404 aa18.02■□□□□ 0.48
Vcan-201ENSMUST00000109543 Dynll1P63168 89 aa18.02■□□□□ 0.48
Vcan-201ENSMUST00000109543 Otop3Q80UF9 577 aa18.02■□□□□ 0.48
Vcan-201ENSMUST00000109543 Sgsm1Q8BPQ7 1093 aa18.02■□□□□ 0.48
Vcan-201ENSMUST00000109543 Zfp202Q8C879 641 aa18.02■□□□□ 0.48
Vcan-201ENSMUST00000109543 Rbm10Q99KG3 930 aaKnown RBP18.02■□□□□ 0.48
Vcan-201ENSMUST00000109543 Tulp1Q9Z273 543 aa18.02■□□□□ 0.48
Vcan-201ENSMUST00000109543 Cavin1O54724 392 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Mapkapk5O54992 473 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Vps37dQ810I0 261 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Rnf41Q8BH75 317 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 McamQ8R2Y2 648 aaKnown RBP18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Tktl2Q9D4D4 627 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Rcan1Q9JHG6 198 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Nup98Q6PFD9 1816 aaKnown RBP18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Ces1hD3Z298 562 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Tuft1O08970 390 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Abl1P00520 1123 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Glis3Q6XP49 780 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Ano10Q8BH79 659 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Q8BZJ8 459 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Terb1Q8C0V1 768 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Rtn1Q8K0T0 780 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Cxcl11Q9JHH5 100 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Cnpy2Q9QXT0 182 aa18.01■□□□□ 0.47
Vcan-201ENSMUST00000109543 Bnip3O55003 187 aa18■□□□□ 0.47
Vcan-201ENSMUST00000109543 U2af2P26369 475 aaKnown RBP18■□□□□ 0.47
Vcan-201ENSMUST00000109543 Celf1P28659 486 aaKnown RBP18■□□□□ 0.47
Vcan-201ENSMUST00000109543 XpcP51612 930 aa18■□□□□ 0.47
Vcan-201ENSMUST00000109543 Ppp1r21Q3TDD9 780 aa18■□□□□ 0.47
Vcan-201ENSMUST00000109543 Bin1O08539 588 aaKnown RBP18■□□□□ 0.47
Vcan-201ENSMUST00000109543 Ncbp1Q3UYV9 790 aaKnown RBP18■□□□□ 0.47
Vcan-201ENSMUST00000109543 Olfr118Q7TRJ6 321 aa18■□□□□ 0.47
Vcan-201ENSMUST00000109543 Kcnj14Q8JZN3 434 aa18■□□□□ 0.47
Vcan-201ENSMUST00000109543 HmcesQ8R1M0 353 aaKnown RBP18■□□□□ 0.47
Vcan-201ENSMUST00000109543 Ptgs1P22437 602 aa17.99■□□□□ 0.47
Vcan-201ENSMUST00000109543 Spata5Q3UMC0 893 aaKnown RBP17.99■□□□□ 0.47
Vcan-201ENSMUST00000109543 HelbQ6NVF4 1074 aa17.99■□□□□ 0.47
Vcan-201ENSMUST00000109543 Pcdhb14Q6PB90 796 aa17.99■□□□□ 0.47
Vcan-201ENSMUST00000109543 Cfap69Q8BH53 942 aa17.99■□□□□ 0.47
Vcan-201ENSMUST00000109543 Rec8Q8C5S7 591 aa17.99■□□□□ 0.47
Vcan-201ENSMUST00000109543 Kiaa0319lQ8K135 1048 aa17.99■□□□□ 0.47
Vcan-201ENSMUST00000109543 Kcnk13Q8R1P5 405 aa17.99■□□□□ 0.47
Vcan-201ENSMUST00000109543 Luzp1Q8R4U7 1068 aaKnown RBP17.99■□□□□ 0.47
Vcan-201ENSMUST00000109543 C4bP01029 1738 aa17.99■□□□□ 0.47
Vcan-201ENSMUST00000109543 Dnaaf2Q8BPI1 814 aa17.99■□□□□ 0.47
Vcan-201ENSMUST00000109543 Evc2Q8K1G2 1220 aa17.99■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 76.2 ms