RNA–Protein interactions for RNA: ENSMUST00000081339.12

Rrp1b-201, Transcript of Ribosomal RNA processing protein 1 homolog B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rrp1b, Length 4,874 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1b-201ENSMUST00000081339 Gm28047Q3US59 414 aa16.16■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Eme2Q56A04 373 aa16.16■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Ttc37F8VPK0 1563 aa16.15■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Ssrp1Q08943 708 aaKnown RBP16.15■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Rtn1Q8K0T0 780 aa16.15■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Sgsm2Q80U12 1005 aa16.15■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Nop2Q922K7 793 aaKnown RBP16.15■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Arhgef28P97433 1693 aa16.15■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Q8BZJ8 459 aa16.15■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 SdsQ8VBT2 327 aa16.15■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Gm29094F6Q785 221 aa16.14■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Slc4a8Q8JZR6 1089 aa16.14■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Ctage5Q8R311 779 aa16.14■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Cul5Q9D5V5 780 aa16.14■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Uso1Q9Z1Z0 959 aaKnown RBP16.14■□□□□ 0.18
Rrp1b-201ENSMUST00000081339 Rreb1Q3UH06 1700 aaKnown RBP16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Gm3409A0A0G2JE67 319 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Als2cr12Q8BVM7 383 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Wdr24Q8CFJ9 790 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Setdb1O88974 1307 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Hdhd2Q3UGR5 259 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Ccdc42Q5SV66 316 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Arid3aQ62431 601 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Trak2Q6P9N8 913 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 InsrrQ9WTL4 1300 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Clip2Q9Z0H8 1047 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Plbd2Q3TCN2 594 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Atp1a3Q6PIC6 1013 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Ranbp6Q8BIV3 1105 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Dph6Q9CQ28 267 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Mrps25Q9D125 171 aaKnown RBP16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Appbp2Q9DAX9 585 aa16.14■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Clul1Q3ZRW6 464 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 GlmnQ8BZM1 596 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Zswim4Q8C7B8 1101 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Mylk2Q8VCR8 613 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Calml4Q91WQ9 153 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Ssfa2Q922B9 1252 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Elf2Q9JHC9 593 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 4930407I10RikD3Z5T8 1512 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 SsbP32067 415 aaKnown RBP16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Hs2st1Q8R3H7 356 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Atp1a4Q9WV27 1032 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 AdgbG3UZ78 1657 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 MeiocA2AG06 965 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Cyp24a1Q64441 514 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 GalcP54818 684 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Ccdc148Q6P5U8 527 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Tcp11l1Q8BTG3 509 aa16.13■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 MarsQ68FL6 902 aaKnown RBP16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Exoc1Q8R3S6 894 aa16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Mroh1E0CZ22 1640 aa16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Ube3aO08759 870 aa16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Nlrp1aQ2LKU9 1182 aa16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Cyp4f39Q8BGU0 532 aa16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Paf1Q8K2T8 535 aa16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Gdf11Q9Z1W4 405 aa16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Mtx1P47802 317 aa16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Srp68Q8BMA6 625 aaKnown RBP16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Nfxl1E9Q8I7 918 aaKnown RBP16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Bach1P97302 739 aa16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Zfp202Q8C879 641 aa16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Pcdhb22Q91XZ8 794 aa16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Cdca7lQ922M5 438 aa16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Fam114a1Q9D281 569 aa16.12■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Fam186bD3Z420 943 aa16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Ttll12Q3UDE2 639 aa16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Prdm1Q60636 856 aa16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Map3k11Q80XI6 850 aa16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Rbm33Q9CXK9 1231 aaKnown RBP16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 RalylQ8BTF8 293 aa16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Cyp2d12Q8BVD2 504 aa16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Trim52Q8CDV4 233 aa16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Kcnh3Q9WVJ0 1095 aa16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Me3Q8BMF3 604 aa16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Krt79Q8VED5 531 aa16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Gm10378F6XQQ1 160 aa16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Epb41l2O70318 988 aaKnown RBP16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 GnaqP21279 359 aa16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 MarcksP26645 309 aaKnown RBP16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 9230110C19RikQ8CC70 267 aa16.11■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Znf521Q6KAS7 1311 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Iqgap1Q9JKF1 1657 aaKnown RBP16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Map2k1P31938 393 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Cyp2c23E9Q5K4 494 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Tpcn2Q8BWC0 731 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Frat2Q8K025 231 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Gtf2iQ9ESZ8 998 aaKnown RBP16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Adarb2Q9JI20 745 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Gpr182P43142 395 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 L1td1Q587J6 782 aaKnown RBP16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Pex1Q5BL07 1284 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Myl10Q62082 202 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Cfap53Q9D439 514 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Lonrf3Q9D4H7 753 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Xpo4Q9ESJ0 1151 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Gjc1P28229 396 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Cetn2Q9R1K9 172 aa16.1■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Gm28919A0A087WP35 240 aa16.09■□□□□ 0.17
Rrp1b-201ENSMUST00000081339 Bin2D3Z6Q9 489 aa16.09■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms