RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Dapk3O54784 448 aa21.91■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 EmbP21995 330 aa21.91■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Gas2l3Q3UWW6 683 aa21.91■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Il17raQ60943 864 aa21.91■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Ankrd23Q812A3 306 aa21.91■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Pnpla2Q8BJ56 486 aa21.91■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Ccdc150Q8CDI7 1110 aa21.91■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Speer4bQ9D9F7 267 aa21.91■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Riok1Q922Q2 567 aa21.9■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Large1Q9Z1M7 756 aa21.9■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Me1P06801 572 aa21.89■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Ric8aQ3TIR3 530 aa21.89■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Acnat2Q8BGG9 420 aa21.89■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Stac3Q8BZ71 360 aa21.89■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Ttc19Q8CC21 365 aa21.89■■□□□ 1.1
Ccdc50-201ENSMUST00000039443 Cyp3a59D3Z2W7 503 aa21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Ccdc191J3QQ27 883 aa21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Kif3cO35066 796 aa21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Cyp26a1O55127 497 aa21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 LtkP08923 888 aa21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Trap1aP19473 224 aa21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Nbr1P97432 988 aa21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Specc1lQ2KN98 1118 aaKnown RBP21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Kmt5bQ3U8K7 883 aa21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Sik1Q60670 779 aa21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Bag1Q60739 355 aa21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Prpf4bQ61136 1007 aaKnown RBP21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 VmacQ8BP01 174 aa21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Tcp11l1Q8BTG3 509 aa21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Sec62Q8BU14 398 aaKnown RBP21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Zbtb43Q9DAI4 467 aa21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 AatfQ9JKX4 526 aaKnown RBP21.89■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Ampd3O08739 766 aa21.88■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Maats1Q8BRC6 783 aa21.88■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Vps18Q8R307 973 aa21.88■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Trim11Q99PQ2 467 aa21.88■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Slc7a1Q09143 622 aa21.88■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 LarsQ8BMJ2 1178 aa21.88■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Bola3Q8CEI1 110 aa21.88■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Kcnq5Q9JK45 933 aa21.88■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Atp12aQ9Z1W8 1035 aa21.88■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Gm21680A0A0G2JGR8 267 aa21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Arglu1Q3UL36 271 aaKnown RBP21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Gnl3lQ6PGG6 577 aaKnown RBP21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Cep120Q7TSG1 988 aa21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Tada3Q8R0L9 432 aa21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Ncoa5Q91W39 579 aaKnown RBP21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Gnl2Q99LH1 728 aaKnown RBP21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Krt84Q99M73 603 aa21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Ube3bQ9ES34 1070 aa21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Zranb2Q9R020 330 aaKnown RBP21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Gm11983V9GXS8 105 aa21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Ftl2P49945 183 aa21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Epha2Q03145 977 aa21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Znf532Q6NXK2 1036 aa21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Ehd2Q8BH64 543 aa21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 MbipQ99LQ1 341 aa21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Abcb6Q9DC29 842 aa21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Kcnh3Q9WVJ0 1095 aa21.87■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Med23Q80YQ2 1367 aa21.86■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Dnm1P39053 867 aa21.86■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Foxp1P58462 705 aa21.86■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Arhgef16Q3U5C8 713 aa21.86■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Luc7l2Q7TNC4 392 aaKnown RBP21.86■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Ppp2r2cQ8BG02 447 aa21.86■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Nat10Q8K224 1024 aaKnown RBP21.86■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Wasf1Q8R5H6 559 aa21.86■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Pcdhgc5Q91XW9 944 aa21.86■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 A0A1L1SQF0 893 aa21.85■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Exoc5Q3TPX4 708 aa21.85■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Map9Q3TRR0 646 aa21.85■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Klhl30Q8C3F7 581 aa21.85■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Phf20l1Q8CCJ9 1013 aa21.85■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Mylk2Q8VCR8 613 aa21.85■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Gm5624F6ZZG8 207 aa21.84■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Plcb3P51432 1234 aaKnown RBP21.84■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Tbx2Q60707 711 aa21.84■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Pcdhb9E9Q5G2 828 aa21.84■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Zkscan8Q8BSL0 588 aa21.84■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 NenfQ9CQ45 171 aa21.84■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Vnn1Q9Z0K8 512 aa21.84■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Col4a1P02463 1669 aa21.83■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Casp12O08736 419 aa21.83■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Pde6aP27664 859 aa21.83■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Kcnj4P52189 445 aa21.83■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Ddb1Q3U1J4 1140 aaKnown RBP21.83■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 DymQ8CHY3 669 aa21.83■■□□□ 1.09
Ccdc50-201ENSMUST00000039443 Sipa1l3G3X9J0 1776 aa21.83■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Lipo1J3QME6 396 aa21.82■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 SsbP32067 415 aaKnown RBP21.82■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Ckap2Q3V1H1 664 aa21.82■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Asnsd1Q8BFS9 627 aa21.82■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Cd209bQ8CJ91 325 aa21.82■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 IncenpQ9WU62 880 aa21.82■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Hspa4Q61316 841 aa21.82■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Ints5Q8CHT3 1018 aa21.82■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Fam84aQ9D650 292 aa21.82■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Arap2Q8BZ05 1703 aa21.82■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Mast3Q3U214 1321 aa21.81■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Tpm3-rs7D3Z2H9 248 aa21.81■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms