RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SLC35B1P78383 322 aa7.6□□□□□ -1.19
PHGDH-215ENST00000641371 PDE6HQ13956 83 aa7.6□□□□□ -1.19
PHGDH-215ENST00000641371 C19orf35Q6ZS72 473 aa7.6□□□□□ -1.19
PHGDH-215ENST00000641371 C15orf54Q8N8G6 183 aa7.6□□□□□ -1.19
PHGDH-215ENST00000641371 ANAPC16Q96DE5 110 aa7.6□□□□□ -1.19
PHGDH-215ENST00000641371 SMIM12Q96EX1 92 aa7.6□□□□□ -1.19
PHGDH-215ENST00000641371 BTF3L4Q96K17 158 aa7.6□□□□□ -1.19
PHGDH-215ENST00000641371 RPS10P5Q9NQ39 176 aa7.6□□□□□ -1.19
PHGDH-215ENST00000641371 RABAC1Q9UI14 185 aa7.6□□□□□ -1.19
PHGDH-215ENST00000641371 APCP25054 2843 aa7.6□□□□□ -1.19
PHGDH-215ENST00000641371 F8W735 103 aaPredicted RBP7.59□□□□□ -1.19
PHGDH-215ENST00000641371 TGOLN2O43493 480 aa7.59□□□□□ -1.19
PHGDH-215ENST00000641371 IGHV4-59P01825 116 aa7.59□□□□□ -1.19
PHGDH-215ENST00000641371 TRGV3P03979 118 aa7.59□□□□□ -1.19
PHGDH-215ENST00000641371 CTSGP08311 255 aa7.59□□□□□ -1.19
PHGDH-215ENST00000641371 NBEAP1P0C6P0 100 aa7.59□□□□□ -1.19
PHGDH-215ENST00000641371 SRP14P37108 136 aaKnown RBP7.59□□□□□ -1.19
PHGDH-215ENST00000641371 ATP5G3P48201 142 aa7.59□□□□□ -1.19
PHGDH-215ENST00000641371 TAS2R60P59551 318 aa7.59□□□□□ -1.19
PHGDH-215ENST00000641371 C1orf194Q5T5A4 169 aa7.59□□□□□ -1.19
PHGDH-215ENST00000641371 ATRAIDQ6UW56 229 aa7.59□□□□□ -1.19
PHGDH-215ENST00000641371 MAPK1IP1LQ8NDC0 245 aa7.59□□□□□ -1.19
PHGDH-215ENST00000641371 WFDC11Q8NEX6 87 aa7.59□□□□□ -1.19
PHGDH-215ENST00000641371 FXYD5Q96DB9 178 aa7.59□□□□□ -1.19
PHGDH-215ENST00000641371 ZNF503Q96F45 646 aa7.59□□□□□ -1.19
PHGDH-215ENST00000641371 YTHDF2Q9Y5A9 579 aaKnown RBP7.59□□□□□ -1.19
PHGDH-215ENST00000641371 POLQO75417 2590 aa7.59□□□□□ -1.2
PHGDH-215ENST00000641371 CELSR2Q9HCU4 2923 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 CENPEQ02224 2701 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 TEX15Q9BXT5 2789 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 SERTM2A0A1B0GWG4 89 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 OR2T8A6NH00 312 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 FBLL1A6NHQ2 334 aaKnown RBP7.58□□□□□ -1.2
PHGDH-215ENST00000641371 G3V318 75 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 DNASE2O00115 360 aaPredicted RBP7.58□□□□□ -1.2
PHGDH-215ENST00000641371 TSPAN4O14817 238 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 ZNF253O75346 499 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 SCO1O75880 301 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 IGLV1-40P01703 118 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 IGHG4P01861 327 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 GP9P14770 177 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 GPR183P32249 361 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 CNN1P51911 297 aaKnown RBP7.58□□□□□ -1.2
PHGDH-215ENST00000641371 TPPP2P59282 170 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 ZNF674Q2M3X9 581 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 C5orf17Q8NAS9 161 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 BIN3Q9NQY0 253 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 OTORQ9NRC9 128 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 CLEC5AQ9NY25 188 aa7.58□□□□□ -1.2
PHGDH-215ENST00000641371 ZNF98A6NK75 572 aa7.57□□□□□ -1.2
PHGDH-215ENST00000641371 CLDN34H7C241 214 aa7.57□□□□□ -1.2
PHGDH-215ENST00000641371 NDUFB4O95168 129 aa7.57□□□□□ -1.2
PHGDH-215ENST00000641371 CLEC3BP05452 202 aa7.57□□□□□ -1.2
PHGDH-215ENST00000641371 ELANEP08246 267 aa7.57□□□□□ -1.2
PHGDH-215ENST00000641371 OR10J4P0C629 311 aa7.57□□□□□ -1.2
PHGDH-215ENST00000641371 BMI1P35226 326 aa7.57□□□□□ -1.2
PHGDH-215ENST00000641371 AKR1C3P42330 323 aa7.57□□□□□ -1.2
PHGDH-215ENST00000641371 SUMO1P63165 101 aaKnown RBP7.57□□□□□ -1.2
PHGDH-215ENST00000641371 PSG9Q00887 426 aa7.57□□□□□ -1.2
PHGDH-215ENST00000641371 CFHR3Q02985 330 aa7.57□□□□□ -1.2
PHGDH-215ENST00000641371 ZNF343Q6P1L6 599 aa7.57□□□□□ -1.2
PHGDH-215ENST00000641371 BCL6BQ8N143 479 aaPredicted RBP7.57□□□□□ -1.2
PHGDH-215ENST00000641371 METTL26Q96S19 204 aa7.57□□□□□ -1.2
PHGDH-215ENST00000641371 GSX1Q9H4S2 264 aaPredicted RBP7.57□□□□□ -1.2
PHGDH-215ENST00000641371 CDC42EP3Q9UKI2 254 aa7.57□□□□□ -1.2
PHGDH-215ENST00000641371 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.56□□□□□ -1.2
PHGDH-215ENST00000641371 TRAV5A0A0B4J249 113 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 MDFIC2A0A1B0GVS7 189 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 SCO2A0A1W2PP80 73 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 HELTA6NFD8 242 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 GGTLC3B5MD39 225 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 K7EQM0 130 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 NDUFA4O00483 81 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 EIF3GO75821 320 aaKnown RBP eCLIP7.56□□□□□ -1.2
PHGDH-215ENST00000641371 PYYP10082 97 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 PF4V1P10720 104 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 S100PP25815 95 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 RPL23P62829 140 aaKnown RBP7.56□□□□□ -1.2
PHGDH-215ENST00000641371 BLCAPP62952 87 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 RPL19P84098 196 aaKnown RBP7.56□□□□□ -1.2
PHGDH-215ENST00000641371 FOXE3Q13461 319 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 ADIRFQ15847 76 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 RNF212Q495C1 297 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 TEX38Q6PEX7 206 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 CLEC19AQ6UXS0 136 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 Q8N2B8 174 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 CMTM2Q8TAZ6 248 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 CCDC140Q96MF4 163 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 OR5B12Q96R08 314 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 IMMP2LQ96T52 175 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 ATG101Q9BSB4 218 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 CHRDL1Q9BU40 450 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 ELOVL1Q9BW60 279 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 AAMDCQ9H7C9 122 aa7.56□□□□□ -1.2
PHGDH-215ENST00000641371 A0A1W2PS18 150 aa7.55□□□□□ -1.2
PHGDH-215ENST00000641371 SH2D7A6NKC9 451 aaPredicted RBP7.55□□□□□ -1.2
PHGDH-215ENST00000641371 LINC01548A6NM66 108 aa7.55□□□□□ -1.2
PHGDH-215ENST00000641371 PEX7O00628 323 aa7.55□□□□□ -1.2
PHGDH-215ENST00000641371 HOXA3O43365 443 aaPredicted RBP7.55□□□□□ -1.2
PHGDH-215ENST00000641371 GGCTO75223 188 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms