RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 TMPRSS3P57727 454 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 SAMD13Q5VXD3 122 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 ITLN1Q8WWA0 313 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 IGHV3-72A0A0B4J1Y9 119 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 CDX4O14627 284 aaPredicted RBP11.11□□□□□ -0.63
SCARB2-227ENST00000640957 FAM87AP0C7U9 286 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 CHODLQ9H9P2 273 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 SPTBN4Q9H254 2564 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 PPIAL4CA0A0B4J2A2 164 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 TEX50A0A1B0GTY4 177 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 PPIAL4GP0DN37 164 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 GCSHP23434 173 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 COL8A1P27658 744 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 CFHR2P36980 270 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 DLX1P56177 255 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 COX19Q49B96 90 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 MOGAT3Q86VF5 341 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 EXOC3-AS1Q8N2X6 119 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 DSCAMO60469 2012 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 AKAP13Q12802 2813 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 M0R1B8 84 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 AZU1P20160 251 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 CACNG7P62955 275 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 CALYQ9NYX4 217 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 G3V4G9 280 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 SMKR1H3BMG3 65 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 CIDEAO60543 219 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 ARMS2P0C7Q2 107 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 IFI27P40305 119 aaPredicted RBP11.1□□□□□ -0.63
SCARB2-227ENST00000640957 LOXL3P58215 753 aa11.1□□□□□ -0.63
SCARB2-227ENST00000640957 KLF5Q13887 457 aaPredicted RBP11.1□□□□□ -0.63
SCARB2-227ENST00000640957 DIAPH2-AS1Q14236 149 aa11.09□□□□□ -0.63
SCARB2-227ENST00000640957 C16orf54Q6UWD8 224 aa11.09□□□□□ -0.63
SCARB2-227ENST00000640957 PDPNQ86YL7 162 aa11.09□□□□□ -0.63
SCARB2-227ENST00000640957 H1FXQ92522 213 aaKnown RBP11.09□□□□□ -0.63
SCARB2-227ENST00000640957 TMEM14BQ9NUH8 114 aa11.09□□□□□ -0.63
SCARB2-227ENST00000640957 SLC25A10Q9UBX3 287 aaPredicted RBP11.09□□□□□ -0.63
SCARB2-227ENST00000640957 TMEM265A0A087WTH1 108 aa11.09□□□□□ -0.63
SCARB2-227ENST00000640957 A8MWL6 223 aa11.09□□□□□ -0.63
SCARB2-227ENST00000640957 ADH4P08319 380 aa11.09□□□□□ -0.63
SCARB2-227ENST00000640957 SAA1P0DJI8 122 aaPredicted RBP11.09□□□□□ -0.63
SCARB2-227ENST00000640957 LGALS7P47929 136 aa11.09□□□□□ -0.63
SCARB2-227ENST00000640957 SFTA2Q6UW10 78 aa11.09□□□□□ -0.63
SCARB2-227ENST00000640957 ZNF788Q6ZQV5 615 aa11.09□□□□□ -0.63
SCARB2-227ENST00000640957 GTF2H5Q6ZYL4 71 aa11.09□□□□□ -0.63
SCARB2-227ENST00000640957 SRSF12Q8WXF0 261 aaKnown RBP11.09□□□□□ -0.63
SCARB2-227ENST00000640957 RPP21Q9H633 154 aaKnown RBP11.09□□□□□ -0.63
SCARB2-227ENST00000640957 COL12A1Q99715 3063 aa11.09□□□□□ -0.63
SCARB2-227ENST00000640957 NBEAP1P0C6P0 100 aa11.08□□□□□ -0.64
SCARB2-227ENST00000640957 ZNF257Q9Y2Q1 563 aa11.08□□□□□ -0.64
SCARB2-227ENST00000640957 PTPRBP23467 1997 aa11.08□□□□□ -0.64
SCARB2-227ENST00000640957 SPG11Q96JI7 2443 aa11.08□□□□□ -0.64
SCARB2-227ENST00000640957 AP5S1Q9NUS5 200 aa11.08□□□□□ -0.64
SCARB2-227ENST00000640957 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-227ENST00000640957 LIPFP07098 398 aa11.08□□□□□ -0.64
SCARB2-227ENST00000640957 GOLT1AQ6ZVE7 132 aa11.08□□□□□ -0.64
SCARB2-227ENST00000640957 FA2HQ7L5A8 372 aa11.08□□□□□ -0.64
SCARB2-227ENST00000640957 PRO3102Q9H379 93 aa11.08□□□□□ -0.64
SCARB2-227ENST00000640957 EPDR1Q9UM22 224 aa11.08□□□□□ -0.64
SCARB2-227ENST00000640957 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.07□□□□□ -0.64
SCARB2-227ENST00000640957 FNDC10F2Z333 226 aa11.07□□□□□ -0.64
SCARB2-227ENST00000640957 COX8AP10176 69 aa11.07□□□□□ -0.64
SCARB2-227ENST00000640957 AMTNQ6UX39 209 aa11.07□□□□□ -0.64
SCARB2-227ENST00000640957 SH2D6Q7Z4S9 175 aa11.07□□□□□ -0.64
SCARB2-227ENST00000640957 ZCCHC24Q8N2G6 241 aaKnown RBP11.07□□□□□ -0.64
SCARB2-227ENST00000640957 RNASE2P10153 161 aaKnown RBP11.07□□□□□ -0.64
SCARB2-227ENST00000640957 NRN1LQ496H8 165 aa11.07□□□□□ -0.64
SCARB2-227ENST00000640957 NEU4Q8WWR8 484 aaPredicted RBP11.07□□□□□ -0.64
SCARB2-227ENST00000640957 CXXC4Q9H2H0 198 aa11.07□□□□□ -0.64
SCARB2-227ENST00000640957 S4R3C0 116 aa11.07□□□□□ -0.64
SCARB2-227ENST00000640957 A0A1B0GXF2 115 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 MGST3O14880 152 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 OR2J3O76001 311 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 FCGR2BP31994 310 aaPredicted RBP11.06□□□□□ -0.64
SCARB2-227ENST00000640957 FXYD5Q96DB9 178 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 CCL13Q99616 98 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 MSMPQ1L6U9 139 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 FAM90A1Q86YD7 464 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 FAM216BQ8N7L0 139 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 RALYQ9UKM9 306 aaKnown RBP11.06□□□□□ -0.64
SCARB2-227ENST00000640957 C9orf118A6NHY6 69 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 IQCF6A8MYZ5 107 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 CECR9P0C854 216 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 PPIFP30405 207 aaKnown RBP11.06□□□□□ -0.64
SCARB2-227ENST00000640957 CD69Q07108 199 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 WDR31Q8NA23 367 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 C9orf106Q8NAJ2 232 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 HARBI1Q96MB7 349 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 JKAMPQ9P055 326 aa11.06□□□□□ -0.64
SCARB2-227ENST00000640957 TSSC4Q9Y5U2 329 aaPredicted RBP11.06□□□□□ -0.64
SCARB2-227ENST00000640957 PSG3Q16557 428 aa11.05□□□□□ -0.64
SCARB2-227ENST00000640957 WIPF2Q8TF74 440 aaPredicted RBP11.05□□□□□ -0.64
SCARB2-227ENST00000640957 GPR82Q96P67 336 aa11.05□□□□□ -0.64
SCARB2-227ENST00000640957 TPSG1Q9NRR2 321 aa11.05□□□□□ -0.64
SCARB2-227ENST00000640957 INO80CQ6PI98 192 aaPredicted RBP11.05□□□□□ -0.64
SCARB2-227ENST00000640957 GCSAMQ8N6F7 178 aa11.05□□□□□ -0.64
SCARB2-227ENST00000640957 C17orf77Q96MU5 243 aa11.05□□□□□ -0.64
SCARB2-227ENST00000640957 DKK2Q9UBU2 259 aa11.05□□□□□ -0.64
SCARB2-227ENST00000640957 HSPB8Q9UJY1 196 aa11.05□□□□□ -0.64
SCARB2-227ENST00000640957 FOXA2Q9Y261 457 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms