RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TRAV2A0A0B4J234 112 aa16.1■□□□□ 0.17
SCN1B-206ENST00000638536 DEFB131AP59861 70 aa16.1■□□□□ 0.17
SCN1B-206ENST00000638536 SIGLEC15Q6ZMC9 328 aa16.1■□□□□ 0.17
SCN1B-206ENST00000638536 BPIFCQ8NFQ6 507 aa16.1■□□□□ 0.17
SCN1B-206ENST00000638536 GGTLC1Q9BX51 225 aa16.1■□□□□ 0.17
SCN1B-206ENST00000638536 DOK5Q9P104 306 aa16.1■□□□□ 0.17
SCN1B-206ENST00000638536 RPL35AP18077 110 aaKnown RBP16.09■□□□□ 0.17
SCN1B-206ENST00000638536 TEPPQ6URK8 271 aa16.09■□□□□ 0.17
SCN1B-206ENST00000638536 OR1B1Q8NGR6 318 aa16.09■□□□□ 0.17
SCN1B-206ENST00000638536 GGACTQ9BVM4 153 aa16.09■□□□□ 0.17
SCN1B-206ENST00000638536 HELTA6NFD8 242 aa16.08■□□□□ 0.17
SCN1B-206ENST00000638536 ZNF688P0C7X2 276 aa16.08■□□□□ 0.17
SCN1B-206ENST00000638536 CXCL3P19876 107 aa16.08■□□□□ 0.17
SCN1B-206ENST00000638536 SULT1A1P50225 295 aa16.08■□□□□ 0.17
SCN1B-206ENST00000638536 PPP1R1CQ8WVI7 109 aa16.08■□□□□ 0.17
SCN1B-206ENST00000638536 MGST2Q99735 147 aa16.08■□□□□ 0.17
SCN1B-206ENST00000638536 SPATA25Q9BR10 227 aa16.08■□□□□ 0.17
SCN1B-206ENST00000638536 CSMD3Q7Z407 3707 aa16.08■□□□□ 0.17
SCN1B-206ENST00000638536 NHLH2Q02577 135 aa16.08■□□□□ 0.16
SCN1B-206ENST00000638536 RNF126Q9BV68 326 aa16.08■□□□□ 0.16
SCN1B-206ENST00000638536 AGPAT2O15120 278 aa16.07■□□□□ 0.16
SCN1B-206ENST00000638536 CFDP00746 253 aaPredicted RBP16.07■□□□□ 0.16
SCN1B-206ENST00000638536 LINC00869P0C866 280 aa16.07■□□□□ 0.16
SCN1B-206ENST00000638536 AP2S1P53680 142 aaPredicted RBP16.07■□□□□ 0.16
SCN1B-206ENST00000638536 PPP1R14BQ96C90 147 aa16.07■□□□□ 0.16
SCN1B-206ENST00000638536 C17orf77Q96MU5 243 aa16.07■□□□□ 0.16
SCN1B-206ENST00000638536 CYCSP99999 105 aaKnown RBP16.06■□□□□ 0.16
SCN1B-206ENST00000638536 PATE2Q6UY27 113 aa16.06■□□□□ 0.16
SCN1B-206ENST00000638536 SLC25A22Q9H936 323 aa16.06■□□□□ 0.16
SCN1B-206ENST00000638536 NRN1Q9NPD7 142 aa16.06■□□□□ 0.16
SCN1B-206ENST00000638536 SLC45A2Q9UMX9 530 aa16.06■□□□□ 0.16
SCN1B-206ENST00000638536 ZNF98A6NK75 572 aa16.05■□□□□ 0.16
SCN1B-206ENST00000638536 VWC2Q2TAL6 325 aa16.05■□□□□ 0.16
SCN1B-206ENST00000638536 WWC2-AS2Q96NR7 200 aa16.05■□□□□ 0.16
SCN1B-206ENST00000638536 UHRF2Q96PU4 802 aa16.05■□□□□ 0.16
SCN1B-206ENST00000638536 SCRT1Q9BWW7 348 aa16.05■□□□□ 0.16
SCN1B-206ENST00000638536 E5RGE8 158 aa16.05■□□□□ 0.16
SCN1B-206ENST00000638536 MPC2O95563 127 aa16.05■□□□□ 0.16
SCN1B-206ENST00000638536 CMC4P56277 68 aaPredicted RBP16.05■□□□□ 0.16
SCN1B-206ENST00000638536 PLP1P60201 277 aa16.05■□□□□ 0.16
SCN1B-206ENST00000638536 SELENOTP62341 195 aa16.05■□□□□ 0.16
SCN1B-206ENST00000638536 C1orf194Q5T5A4 169 aa16.05■□□□□ 0.16
SCN1B-206ENST00000638536 OR8I2Q8N0Y5 310 aa16.05■□□□□ 0.16
SCN1B-206ENST00000638536 SLC25A32Q9H2D1 315 aa16.05■□□□□ 0.16
SCN1B-206ENST00000638536 RLN2P04090 185 aa16.04■□□□□ 0.16
SCN1B-206ENST00000638536 S100A11P31949 105 aa16.04■□□□□ 0.16
SCN1B-206ENST00000638536 EWSR1Q01844 656 aaKnown RBP eCLIP16.04■□□□□ 0.16
SCN1B-206ENST00000638536 STX12Q86Y82 276 aa16.04■□□□□ 0.16
SCN1B-206ENST00000638536 OR11H7Q8NGC8 314 aa16.04■□□□□ 0.16
SCN1B-206ENST00000638536 TMEM147Q9BVK8 224 aa16.04■□□□□ 0.16
SCN1B-206ENST00000638536 SLC25A39Q9BZJ4 359 aaPredicted RBP16.04■□□□□ 0.16
SCN1B-206ENST00000638536 ARL6Q9H0F7 186 aa16.04■□□□□ 0.16
SCN1B-206ENST00000638536 UQCC1Q9NVA1 299 aa16.04■□□□□ 0.16
SCN1B-206ENST00000638536 WDR83OSQ9Y284 106 aa16.04■□□□□ 0.16
SCN1B-206ENST00000638536 UBE2L5PA0A1B0GUS4 154 aa16.03■□□□□ 0.16
SCN1B-206ENST00000638536 KNCNA6PVL3 124 aa16.03■□□□□ 0.16
SCN1B-206ENST00000638536 H3BRN7 92 aa16.03■□□□□ 0.16
SCN1B-206ENST00000638536 OR5G3P0C626 314 aa16.03■□□□□ 0.16
SCN1B-206ENST00000638536 NUP62P37198 522 aaPredicted RBP16.03■□□□□ 0.16
SCN1B-206ENST00000638536 FCN2Q15485 313 aa16.03■□□□□ 0.16
SCN1B-206ENST00000638536 PSMG4Q5JS54 123 aa16.03■□□□□ 0.16
SCN1B-206ENST00000638536 PFDN2Q9UHV9 154 aa16.03■□□□□ 0.16
SCN1B-206ENST00000638536 HYPMO75409 117 aa16.02■□□□□ 0.16
SCN1B-206ENST00000638536 DEFB1P60022 68 aa16.02■□□□□ 0.16
SCN1B-206ENST00000638536 OVOL2Q9BRP0 275 aa16.02■□□□□ 0.16
SCN1B-206ENST00000638536 HIGD1AQ9Y241 93 aa16.02■□□□□ 0.16
SCN1B-206ENST00000638536 STARD9Q9P2P6 4700 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 SOCS3O14543 225 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 CAMLGP49069 296 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 MIC13Q5XKP0 118 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 OR5C1Q8NGR4 320 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 SHANK2-AS3Q9BTD1 123 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 FBXL17Q9UF56 701 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 HBG1P69891 147 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 HBG2P69892 147 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 RGS21Q2M5E4 152 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 DEFB135Q30KP9 77 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 ZNF546Q86UE3 836 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 TMEM37Q8WXS4 190 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 ARV1Q9H2C2 271 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 EDA2RQ9HAV5 297 aa16.01■□□□□ 0.15
SCN1B-206ENST00000638536 APOC4P55056 127 aa16■□□□□ 0.15
SCN1B-206ENST00000638536 RAP2BP61225 183 aa16■□□□□ 0.15
SCN1B-206ENST00000638536 BAXQ07812 192 aa16■□□□□ 0.15
SCN1B-206ENST00000638536 OXA1LQ15070 435 aa16■□□□□ 0.15
SCN1B-206ENST00000638536 RSG1Q9BU20 258 aa16■□□□□ 0.15
SCN1B-206ENST00000638536 MBD2Q9UBB5 411 aa16■□□□□ 0.15
SCN1B-206ENST00000638536 KIR2DL5BA0A0G2JN68 375 aa15.99■□□□□ 0.15
SCN1B-206ENST00000638536 KIR2DL5BA0A0G2JPC4 375 aa15.99■□□□□ 0.15
SCN1B-206ENST00000638536 PRR20EP86478 221 aa15.99■□□□□ 0.15
SCN1B-206ENST00000638536 PRR20CP86479 221 aa15.99■□□□□ 0.15
SCN1B-206ENST00000638536 PRR20DP86480 221 aa15.99■□□□□ 0.15
SCN1B-206ENST00000638536 PRR20BP86481 221 aa15.99■□□□□ 0.15
SCN1B-206ENST00000638536 PRR20AP86496 221 aa15.99■□□□□ 0.15
SCN1B-206ENST00000638536 CLINT1Q14677 625 aa15.99■□□□□ 0.15
SCN1B-206ENST00000638536 ACTL10Q5JWF8 245 aa15.99■□□□□ 0.15
SCN1B-206ENST00000638536 MORN5Q5VZ52 161 aa15.99■□□□□ 0.15
SCN1B-206ENST00000638536 KIR2DL5AQ8N109 375 aa15.99■□□□□ 0.15
SCN1B-206ENST00000638536 KIR2DL5BQ8NHK3 375 aa15.99■□□□□ 0.15
SCN1B-206ENST00000638536 SLC25A31Q9H0C2 315 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms