RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 TNFRSF14Q92956 283 aa16.08■□□□□ 0.16
SYNGAP1-227ENST00000638142 URB1-AS1Q96HZ7 61 aa16.08■□□□□ 0.16
SYNGAP1-227ENST00000638142 ASPMQ8IZT6 3477 aa16.08■□□□□ 0.16
SYNGAP1-227ENST00000638142 OTOGLQ3ZCN5 2332 aa16.08■□□□□ 0.16
SYNGAP1-227ENST00000638142 IGHV3-72A0A0B4J1Y9 119 aa16.07■□□□□ 0.16
SYNGAP1-227ENST00000638142 FAM231BA6NCW3 169 aa16.07■□□□□ 0.16
SYNGAP1-227ENST00000638142 CRYGBP07316 175 aa16.07■□□□□ 0.16
SYNGAP1-227ENST00000638142 FAM87AP0C7U9 286 aa16.07■□□□□ 0.16
SYNGAP1-227ENST00000638142 DAZAP1Q96EP5 407 aaKnown RBP16.07■□□□□ 0.16
SYNGAP1-227ENST00000638142 TMEM70Q9BUB7 260 aa16.07■□□□□ 0.16
SYNGAP1-227ENST00000638142 RBPMS2Q6ZRY4 209 aaKnown RBP16.07■□□□□ 0.16
SYNGAP1-227ENST00000638142 CHCHD1Q96BP2 118 aaKnown RBP16.07■□□□□ 0.16
SYNGAP1-227ENST00000638142 C1RLQ9NZP8 487 aa16.07■□□□□ 0.16
SYNGAP1-227ENST00000638142 LHFPL4Q7Z7J7 247 aa16.06■□□□□ 0.16
SYNGAP1-227ENST00000638142 RNASE6Q93091 150 aaKnown RBP16.06■□□□□ 0.16
SYNGAP1-227ENST00000638142 PRRG2O14669 202 aa16.06■□□□□ 0.16
SYNGAP1-227ENST00000638142 HIGD1AQ9Y241 93 aa16.06■□□□□ 0.16
SYNGAP1-227ENST00000638142 SIGLEC9Q9Y336 463 aa16.06■□□□□ 0.16
SYNGAP1-227ENST00000638142 F11RQ9Y624 299 aaKnown RBP16.06■□□□□ 0.16
SYNGAP1-227ENST00000638142 RP1L1Q8IWN7 2480 aaPredicted RBP16.05■□□□□ 0.16
SYNGAP1-227ENST00000638142 CRXO43186 299 aaPredicted RBP16.05■□□□□ 0.16
SYNGAP1-227ENST00000638142 C21orf62-AS1Q17RA5 79 aa16.05■□□□□ 0.16
SYNGAP1-227ENST00000638142 PGLYRP4Q96LB8 373 aa16.05■□□□□ 0.16
SYNGAP1-227ENST00000638142 OTORQ9NRC9 128 aa16.05■□□□□ 0.16
SYNGAP1-227ENST00000638142 NPIPB6E9PJ23 425 aa16.05■□□□□ 0.16
SYNGAP1-227ENST00000638142 K7EP13 123 aa16.05■□□□□ 0.16
SYNGAP1-227ENST00000638142 FAM120AOSQ5T036 256 aa16.05■□□□□ 0.16
SYNGAP1-227ENST00000638142 ZNF835Q9Y2P0 537 aa16.05■□□□□ 0.16
SYNGAP1-227ENST00000638142 PLXNB1O43157 2135 aa16.04■□□□□ 0.16
SYNGAP1-227ENST00000638142 SPATA12Q7Z6I5 190 aa16.04■□□□□ 0.16
SYNGAP1-227ENST00000638142 TMEM14CQ9P0S9 112 aa16.04■□□□□ 0.16
SYNGAP1-227ENST00000638142 IGHV3-21A0A0B4J1V1 117 aa16.04■□□□□ 0.16
SYNGAP1-227ENST00000638142 Q6ZVH6 145 aa16.04■□□□□ 0.16
SYNGAP1-227ENST00000638142 Q86TA4 180 aa16.04■□□□□ 0.16
SYNGAP1-227ENST00000638142 KIR3DL3Q8N743 410 aa16.04■□□□□ 0.16
SYNGAP1-227ENST00000638142 RNASE8Q8TDE3 154 aaKnown RBP16.04■□□□□ 0.16
SYNGAP1-227ENST00000638142 DYNLRB1Q9NP97 96 aa16.04■□□□□ 0.16
SYNGAP1-227ENST00000638142 CLEC5AQ9NY25 188 aa16.04■□□□□ 0.16
SYNGAP1-227ENST00000638142 BOD1L1Q8NFC6 3051 aa16.03■□□□□ 0.16
SYNGAP1-227ENST00000638142 CNTFRP26992 372 aa16.03■□□□□ 0.16
SYNGAP1-227ENST00000638142 FOXA3P55318 350 aaPredicted RBP16.03■□□□□ 0.16
SYNGAP1-227ENST00000638142 TMEM190Q8WZ59 177 aa16.03■□□□□ 0.16
SYNGAP1-227ENST00000638142 ST20Q9HBF5 79 aa16.03■□□□□ 0.16
SYNGAP1-227ENST00000638142 H3BTX0 84 aa16.03■□□□□ 0.16
SYNGAP1-227ENST00000638142 APELAP0DMC3 54 aa16.03■□□□□ 0.16
SYNGAP1-227ENST00000638142 RBX1P62877 108 aa16.03■□□□□ 0.16
SYNGAP1-227ENST00000638142 PPP1R27Q86WC6 154 aa16.03■□□□□ 0.16
SYNGAP1-227ENST00000638142 JKAMPQ9P055 326 aa16.03■□□□□ 0.16
SYNGAP1-227ENST00000638142 EP300Q09472 2414 aaPredicted RBP16.02■□□□□ 0.16
SYNGAP1-227ENST00000638142 TEX22C9J3V5 150 aa16.02■□□□□ 0.16
SYNGAP1-227ENST00000638142 IGLV1-47P01700 117 aa16.02■□□□□ 0.16
SYNGAP1-227ENST00000638142 NDFIP1Q9BT67 221 aa16.02■□□□□ 0.16
SYNGAP1-227ENST00000638142 IGHV1-24A0A0C4DH33 117 aa16.02■□□□□ 0.15
SYNGAP1-227ENST00000638142 IGLC1P0CG04 106 aa16.02■□□□□ 0.15
SYNGAP1-227ENST00000638142 PSG1P11464 419 aa16.02■□□□□ 0.15
SYNGAP1-227ENST00000638142 COL8A1P27658 744 aa16.02■□□□□ 0.15
SYNGAP1-227ENST00000638142 LYZP61626 148 aa16.02■□□□□ 0.15
SYNGAP1-227ENST00000638142 INSIG2Q9Y5U4 225 aa16.02■□□□□ 0.15
SYNGAP1-227ENST00000638142 MUC6Q6W4X9 2439 aa16.02■□□□□ 0.15
SYNGAP1-227ENST00000638142 LOC102724200A0A096LPH7 203 aaPredicted RBP16.01■□□□□ 0.15
SYNGAP1-227ENST00000638142 IGHV2-70DA0A0C4DH43 119 aa16.01■□□□□ 0.15
SYNGAP1-227ENST00000638142 CHEK1O14757 476 aa16.01■□□□□ 0.15
SYNGAP1-227ENST00000638142 SLC25A39Q9BZJ4 359 aaPredicted RBP16.01■□□□□ 0.15
SYNGAP1-227ENST00000638142 IGHV1-3A0A0C4DH29 117 aa16.01■□□□□ 0.15
SYNGAP1-227ENST00000638142 TRBV6-1A0A0K0K1D8 114 aa16.01■□□□□ 0.15
SYNGAP1-227ENST00000638142 OR4C46A6NHA9 309 aa16.01■□□□□ 0.15
SYNGAP1-227ENST00000638142 HOXB4P17483 251 aaPredicted RBP16.01■□□□□ 0.15
SYNGAP1-227ENST00000638142 PRSS33Q8NF86 280 aa16.01■□□□□ 0.15
SYNGAP1-227ENST00000638142 GSX1Q9H4S2 264 aaPredicted RBP16.01■□□□□ 0.15
SYNGAP1-227ENST00000638142 CNOT1A5YKK6 2376 aaKnown RBP16■□□□□ 0.15
SYNGAP1-227ENST00000638142 SH2D7A6NKC9 451 aaPredicted RBP16■□□□□ 0.15
SYNGAP1-227ENST00000638142 HAX1O00165 279 aa16■□□□□ 0.15
SYNGAP1-227ENST00000638142 RBPJQ06330 500 aa16■□□□□ 0.15
SYNGAP1-227ENST00000638142 FBLN7Q53RD9 439 aa16■□□□□ 0.15
SYNGAP1-227ENST00000638142 LOC105371242A0A075B767 164 aa16■□□□□ 0.15
SYNGAP1-227ENST00000638142 SYS1-DBNDD2H3BUS1 97 aa16■□□□□ 0.15
SYNGAP1-227ENST00000638142 M0QZ24 198 aa16■□□□□ 0.15
SYNGAP1-227ENST00000638142 LEPROTL1O95214 131 aa16■□□□□ 0.15
SYNGAP1-227ENST00000638142 PRR31Q5SQ13 230 aa16■□□□□ 0.15
SYNGAP1-227ENST00000638142 C16orf54Q6UWD8 224 aa16■□□□□ 0.15
SYNGAP1-227ENST00000638142 ROS1P08922 2347 aa16■□□□□ 0.15
SYNGAP1-227ENST00000638142 IGLV2-11P01706 119 aa15.99■□□□□ 0.15
SYNGAP1-227ENST00000638142 OR5AL1P0C617 328 aa15.99■□□□□ 0.15
SYNGAP1-227ENST00000638142 NGBQ9NPG2 151 aa15.99■□□□□ 0.15
SYNGAP1-227ENST00000638142 RALYQ9UKM9 306 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-227ENST00000638142 TRAV8-1A0A0A6YYK1 113 aa15.99■□□□□ 0.15
SYNGAP1-227ENST00000638142 BUB1B-PAK6H3BSN5 160 aa15.99■□□□□ 0.15
SYNGAP1-227ENST00000638142 CD24P25063 80 aa15.99■□□□□ 0.15
SYNGAP1-227ENST00000638142 CIARTQ8N365 385 aaPredicted RBP15.99■□□□□ 0.15
SYNGAP1-227ENST00000638142 RASL11BQ9BPW5 248 aa15.99■□□□□ 0.15
SYNGAP1-227ENST00000638142 SHISA9B4DS77 424 aa15.98■□□□□ 0.15
SYNGAP1-227ENST00000638142 I3L2K1 104 aa15.98■□□□□ 0.15
SYNGAP1-227ENST00000638142 APOHP02749 345 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-227ENST00000638142 GOLT1AQ6ZVE7 132 aa15.98■□□□□ 0.15
SYNGAP1-227ENST00000638142 SRSF12Q8WXF0 261 aaKnown RBP15.98■□□□□ 0.15
SYNGAP1-227ENST00000638142 ZNF318Q5VUA4 2279 aa15.98■□□□□ 0.15
SYNGAP1-227ENST00000638142 E7EQL1 145 aa15.97■□□□□ 0.15
SYNGAP1-227ENST00000638142 LIPFP07098 398 aa15.97■□□□□ 0.15
SYNGAP1-227ENST00000638142 PRNTQ86SH4 94 aa15.97■□□□□ 0.15
SYNGAP1-227ENST00000638142 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms