RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ARL6IP6Q8N6S5 226 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 C5orf56Q8N8D9 126 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 FRZBQ92765 325 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 HIST1H2BHQ93079 126 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 RNF125Q96EQ8 232 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 HIST1H2BNQ99877 126 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 HIST1H2BMQ99879 126 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 HSPB9Q9BQS6 159 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 CHRDL1Q9BU40 450 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 AURKAIP1Q9NWT8 199 aaPredicted RBP4.36□□□□□ -1.71
NEK3-211ENST00000629912 ZNF586Q9NXT0 402 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 GAR1Q9NY12 217 aaKnown RBP4.36□□□□□ -1.71
NEK3-211ENST00000629912 C21orf62Q9NYP8 219 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 FBXL7Q9UJT9 491 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 V9GYV3 84 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 ABCA2Q9BZC7 2435 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 USP9XQ93008 2570 aaPredicted RBP4.35□□□□□ -1.71
NEK3-211ENST00000629912 FLNCQ14315 2725 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 A0A096LNT2 108 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 A0A0U1RQK1 487 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 ZNF320A2RRD8 509 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 A6NDX4 124 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 ZNF98A6NK75 572 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 J3QLI3 93 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 OR2J3O76001 311 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 AMY1AP04745 511 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 S100A8P05109 93 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 SLC25A5P05141 298 aaKnown RBP4.35□□□□□ -1.71
NEK3-211ENST00000629912 TRGC1P0CF51 173 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 IGLC2P0DOY2 106 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 CDX1P47902 265 aaPredicted RBP4.35□□□□□ -1.71
NEK3-211ENST00000629912 NDUFA6P56556 154 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 ERVFC1-1P60608 527 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 RPL15P61313 204 aaKnown RBP4.35□□□□□ -1.71
NEK3-211ENST00000629912 FABP9Q0Z7S8 132 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 CLEC12BQ2HXU8 276 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 COX19Q49B96 90 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 COA6Q5JTJ3 125 aaKnown RBP4.35□□□□□ -1.71
NEK3-211ENST00000629912 UNQ5815/PRO19632Q6UWF5 114 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 BAGE2Q86Y30 109 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 BPIFA4PQ86YQ2 179 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 LRRC75A-AS1Q8N1F1 130 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 LINC01356Q8N9X3 169 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 C5orf17Q8NAS9 161 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 NECAP1Q8NC96 275 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 ZNF502Q8TBZ5 544 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 ATG101Q9BSB4 218 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 MLST8Q9BVC4 326 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 TMUB1Q9BVT8 246 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 C7orf69Q9H7B7 122 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 BEX4Q9NWD9 120 aaPredicted RBP4.35□□□□□ -1.71
NEK3-211ENST00000629912 MOB4Q9Y3A3 225 aa4.35□□□□□ -1.71
NEK3-211ENST00000629912 TRBV19A0A075B6N1 114 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 TRBV7-1A0A0A6YYK4 115 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 A0A1W2PPQ1 181 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 SMIM27A0A1W2PRY6 76 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 LINC01548A6NM66 108 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 H3BUA1 57 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 M0QZK8 103 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 ATP6V0E1O15342 81 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 TCRAP04437 139 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 IGF1P05019 195 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 IL4P05112 153 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 IGHV4-38-2P0DP08 117 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 HNF1AP20823 631 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 RAB9AP51151 201 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 RPL19P84098 196 aaKnown RBP4.34□□□□□ -1.71
NEK3-211ENST00000629912 LOXL1Q08397 574 aaPredicted RBP4.34□□□□□ -1.71
NEK3-211ENST00000629912 OR5I1Q13606 314 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 PDE6HQ13956 83 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 USF2Q15853 346 aaPredicted RBP4.34□□□□□ -1.71
NEK3-211ENST00000629912 RPEL1Q2QD12 228 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 Q56UQ5 140 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 ACTL10Q5JWF8 245 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 LEMD1Q68G75 181 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 OR4F17Q8NGA8 305 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 BLNKQ8WV28 456 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 MBD6Q96DN6 1003 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 FMC1Q96HJ9 113 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 ZNF414Q96IQ9 312 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 LINC00479Q96M42 142 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 GPR82Q96P67 336 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 Q9H3A6 140 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 ZNF492Q9P255 531 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 ZNF580Q9UK33 172 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 PITPNC1Q9UKF7 332 aa4.34□□□□□ -1.71
NEK3-211ENST00000629912 SPG11Q96JI7 2443 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 IGHV3OR16-10A0A075B7F0 116 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 TRAV41A0A0B4J266 112 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 TRAV34A0A0B4J273 112 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 TRAV40A0A0B4J280 105 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 FBLL1A6NHQ2 334 aaKnown RBP4.33□□□□□ -1.72
NEK3-211ENST00000629912 FAM223BA6NKX1 122 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 G3V318 75 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 SLC17A3O00476 420 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 GATCO43716 136 aaKnown RBP4.33□□□□□ -1.72
NEK3-211ENST00000629912 ZNF253O75346 499 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 AVPP01185 164 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 LTAP01374 205 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 IGHG2P01859 326 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms