RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 ACY3Q96HD9 319 aa18.42■□□□□ 0.54
CAPNS1-216ENST00000628306 ATP6V0E1O15342 81 aa18.42■□□□□ 0.54
CAPNS1-216ENST00000628306 APELAP0DMC3 54 aa18.42■□□□□ 0.54
CAPNS1-216ENST00000628306 ZNF726P1Q15940 193 aa18.42■□□□□ 0.54
CAPNS1-216ENST00000628306 C19orf54Q5BKX5 351 aa18.42■□□□□ 0.54
CAPNS1-216ENST00000628306 MIC13Q5XKP0 118 aa18.42■□□□□ 0.54
CAPNS1-216ENST00000628306 CYP2G1PQ6ZSU1 146 aa18.42■□□□□ 0.54
CAPNS1-216ENST00000628306 STPG3Q8N7X2 389 aa18.42■□□□□ 0.54
CAPNS1-216ENST00000628306 DLX4Q92988 240 aaPredicted RBP18.42■□□□□ 0.54
CAPNS1-216ENST00000628306 IGKV1D-37A0A075B6S9 117 aa18.41■□□□□ 0.54
CAPNS1-216ENST00000628306 FCGR2BP31994 310 aaPredicted RBP18.41■□□□□ 0.54
CAPNS1-216ENST00000628306 RND2P52198 227 aa18.41■□□□□ 0.54
CAPNS1-216ENST00000628306 FAM210AQ96ND0 272 aa18.41■□□□□ 0.54
CAPNS1-216ENST00000628306 TXN2Q99757 166 aa18.41■□□□□ 0.54
CAPNS1-216ENST00000628306 PBDC1Q9BVG4 233 aa18.41■□□□□ 0.54
CAPNS1-216ENST00000628306 TRBV9A0A0B4J1U6 114 aa18.4■□□□□ 0.54
CAPNS1-216ENST00000628306 KRBOX1C9JBD0 128 aa18.4■□□□□ 0.54
CAPNS1-216ENST00000628306 OVOL1O14753 267 aa18.4■□□□□ 0.54
CAPNS1-216ENST00000628306 CD5P06127 495 aa18.4■□□□□ 0.54
CAPNS1-216ENST00000628306 GP9P14770 177 aa18.4■□□□□ 0.54
CAPNS1-216ENST00000628306 RAB9AP51151 201 aa18.4■□□□□ 0.54
CAPNS1-216ENST00000628306 UNQ5815/PRO19632Q6UWF5 114 aa18.4■□□□□ 0.54
CAPNS1-216ENST00000628306 VN1R17PQ8TDU5 208 aa18.4■□□□□ 0.54
CAPNS1-216ENST00000628306 ATP6V0BQ99437 205 aa18.4■□□□□ 0.54
CAPNS1-216ENST00000628306 TM2D3Q9BRN9 247 aa18.4■□□□□ 0.54
CAPNS1-216ENST00000628306 EDA2RQ9HAV5 297 aa18.4■□□□□ 0.54
CAPNS1-216ENST00000628306 TRAV30A0A087WSZ9 112 aa18.39■□□□□ 0.53
CAPNS1-216ENST00000628306 CLN5O75503 358 aa18.39■□□□□ 0.53
CAPNS1-216ENST00000628306 NPBWR1P48145 328 aa18.39■□□□□ 0.53
CAPNS1-216ENST00000628306 ZFAND6Q6FIF0 208 aa18.39■□□□□ 0.53
CAPNS1-216ENST00000628306 C19orf35Q6ZS72 473 aa18.39■□□□□ 0.53
CAPNS1-216ENST00000628306 RNF2Q99496 336 aa18.39■□□□□ 0.53
CAPNS1-216ENST00000628306 SCRT1Q9BWW7 348 aa18.39■□□□□ 0.53
CAPNS1-216ENST00000628306 MRPL36Q9P0J6 103 aaKnown RBP18.39■□□□□ 0.53
CAPNS1-216ENST00000628306 ANKRD34BA5PLL1 514 aa18.38■□□□□ 0.53
CAPNS1-216ENST00000628306 ZFP92A6NM28 416 aa18.38■□□□□ 0.53
CAPNS1-216ENST00000628306 FABP1P07148 127 aa18.38■□□□□ 0.53
CAPNS1-216ENST00000628306 SLURP1P55000 103 aa18.38■□□□□ 0.53
CAPNS1-216ENST00000628306 GATAD1Q8WUU5 269 aa18.38■□□□□ 0.53
CAPNS1-216ENST00000628306 RAB24Q969Q5 203 aa18.38■□□□□ 0.53
CAPNS1-216ENST00000628306 A0A1W2PPV4 95 aa18.37■□□□□ 0.53
CAPNS1-216ENST00000628306 MAP1LC3B2A6NCE7 125 aa18.37■□□□□ 0.53
CAPNS1-216ENST00000628306 H3BUA1 57 aa18.37■□□□□ 0.53
CAPNS1-216ENST00000628306 NDUFS6O75380 124 aaKnown RBP18.37■□□□□ 0.53
CAPNS1-216ENST00000628306 SAP30O75446 220 aa18.37■□□□□ 0.53
CAPNS1-216ENST00000628306 TAGLN2P37802 199 aaKnown RBP18.37■□□□□ 0.53
CAPNS1-216ENST00000628306 CDC34P49427 236 aaPredicted RBP18.37■□□□□ 0.53
CAPNS1-216ENST00000628306 MFAP4P55083 255 aa18.37■□□□□ 0.53
CAPNS1-216ENST00000628306 PLP1P60201 277 aa18.37■□□□□ 0.53
CAPNS1-216ENST00000628306 PEA15Q15121 130 aa18.37■□□□□ 0.53
CAPNS1-216ENST00000628306 BPIFCQ8NFQ6 507 aa18.37■□□□□ 0.53
CAPNS1-216ENST00000628306 OR5T1Q8NG75 326 aa18.37■□□□□ 0.53
CAPNS1-216ENST00000628306 MAP1LC3BQ9GZQ8 125 aa18.37■□□□□ 0.53
CAPNS1-216ENST00000628306 TRAV41A0A0B4J266 112 aa18.36■□□□□ 0.53
CAPNS1-216ENST00000628306 IGLC1P0CG04 106 aa18.36■□□□□ 0.53
CAPNS1-216ENST00000628306 RHOBP62745 196 aa18.36■□□□□ 0.53
CAPNS1-216ENST00000628306 ELOA3CA0A087WX78 387 aaPredicted RBP18.35■□□□□ 0.53
CAPNS1-216ENST00000628306 CCL20P78556 96 aa18.35■□□□□ 0.53
CAPNS1-216ENST00000628306 GUK1Q16774 197 aa18.35■□□□□ 0.53
CAPNS1-216ENST00000628306 FAM122CQ6P4D5 195 aa18.35■□□□□ 0.53
CAPNS1-216ENST00000628306 LCN15Q6UWW0 184 aa18.35■□□□□ 0.53
CAPNS1-216ENST00000628306 Q8N1Y9 231 aa18.35■□□□□ 0.53
CAPNS1-216ENST00000628306 NECAP1Q8NC96 275 aa18.35■□□□□ 0.53
CAPNS1-216ENST00000628306 OR1L4Q8NGR5 311 aa18.35■□□□□ 0.53
CAPNS1-216ENST00000628306 ZMAT4Q9H898 229 aa18.35■□□□□ 0.53
CAPNS1-216ENST00000628306 IGHV4OR15-8A0A075B7B6 117 aa18.34■□□□□ 0.53
CAPNS1-216ENST00000628306 A0A087WW49 117 aa18.34■□□□□ 0.53
CAPNS1-216ENST00000628306 SCGB2A1O75556 95 aa18.34■□□□□ 0.53
CAPNS1-216ENST00000628306 PPT1P50897 306 aa18.34■□□□□ 0.53
CAPNS1-216ENST00000628306 PFDN5Q99471 154 aa18.34■□□□□ 0.53
CAPNS1-216ENST00000628306 DNAJC4Q9NNZ3 241 aa18.34■□□□□ 0.53
CAPNS1-216ENST00000628306 C21orf62Q9NYP8 219 aa18.34■□□□□ 0.53
CAPNS1-216ENST00000628306 ALMS1Q8TCU4 4167 aa18.34■□□□□ 0.53
CAPNS1-216ENST00000628306 TMEM218A2RU14 115 aa18.33■□□□□ 0.53
CAPNS1-216ENST00000628306 RBFOX3A6NFN3 312 aa18.33■□□□□ 0.53
CAPNS1-216ENST00000628306 NDUFB8O95169 186 aa18.33■□□□□ 0.53
CAPNS1-216ENST00000628306 OR5G3P0C626 314 aa18.33■□□□□ 0.53
CAPNS1-216ENST00000628306 STAG3L2P0CL84 134 aa18.33■□□□□ 0.53
CAPNS1-216ENST00000628306 STAG3L3P0CL85 134 aa18.33■□□□□ 0.53
CAPNS1-216ENST00000628306 PSMB3P49720 205 aa18.33■□□□□ 0.53
CAPNS1-216ENST00000628306 YPEL3P61236 119 aaPredicted RBP18.33■□□□□ 0.53
CAPNS1-216ENST00000628306 GCSAMLQ5JQS6 135 aa18.33■□□□□ 0.53
CAPNS1-216ENST00000628306 SSX7Q7RTT5 188 aa18.33■□□□□ 0.53
CAPNS1-216ENST00000628306 MRPL32Q9BYC8 188 aaKnown RBP18.33■□□□□ 0.53
CAPNS1-216ENST00000628306 FBXL7Q9UJT9 491 aa18.33■□□□□ 0.53
CAPNS1-216ENST00000628306 LINC01619G3V211 115 aa18.32■□□□□ 0.52
CAPNS1-216ENST00000628306 IGHV3-48P01763 117 aa18.32■□□□□ 0.52
CAPNS1-216ENST00000628306 ZP3P21754 424 aa18.32■□□□□ 0.52
CAPNS1-216ENST00000628306 ECSCRQ19T08 205 aa18.32■□□□□ 0.52
CAPNS1-216ENST00000628306 KHDC3LQ587J8 217 aa18.32■□□□□ 0.52
CAPNS1-216ENST00000628306 ADAMTSL5Q6ZMM2 481 aa18.32■□□□□ 0.52
CAPNS1-216ENST00000628306 C19orf73Q9NVV2 129 aa18.32■□□□□ 0.52
CAPNS1-216ENST00000628306 FUT9Q9Y231 359 aa18.32■□□□□ 0.52
CAPNS1-216ENST00000628306 IFNA1P01562 189 aa18.31■□□□□ 0.52
CAPNS1-216ENST00000628306 IGKV1-17P01599 117 aa18.31■□□□□ 0.52
CAPNS1-216ENST00000628306 LGALS1P09382 135 aaKnown RBP18.31■□□□□ 0.52
CAPNS1-216ENST00000628306 IGHV4-30-4P0DP06 118 aa18.31■□□□□ 0.52
CAPNS1-216ENST00000628306 ZNF90Q03938 601 aa18.31■□□□□ 0.52
CAPNS1-216ENST00000628306 ZNF506Q5JVG8 444 aa18.31■□□□□ 0.52
CAPNS1-216ENST00000628306 SLC25A22Q9H936 323 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms