RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 OR4C46A6NHA9 309 aa13.93□□□□□ -0.18
CIRBP-245ENST00000621399 BUB3O43684 328 aa13.93□□□□□ -0.18
CIRBP-245ENST00000621399 CD7P09564 240 aa13.93□□□□□ -0.18
CIRBP-245ENST00000621399 FGF7P21781 194 aa13.93□□□□□ -0.18
CIRBP-245ENST00000621399 TFPI2P48307 235 aa13.93□□□□□ -0.18
CIRBP-245ENST00000621399 PAFAH1B2P68402 229 aa13.93□□□□□ -0.18
CIRBP-245ENST00000621399 C16orf54Q6UWD8 224 aa13.93□□□□□ -0.18
CIRBP-245ENST00000621399 GBGT1Q8N5D6 347 aa13.93□□□□□ -0.18
CIRBP-245ENST00000621399 NEURL2Q9BR09 285 aa13.93□□□□□ -0.18
CIRBP-245ENST00000621399 DOK5Q9P104 306 aa13.93□□□□□ -0.18
CIRBP-245ENST00000621399 SMAD5-AS1Q9Y6J3 95 aa13.93□□□□□ -0.18
CIRBP-245ENST00000621399 HELTA6NFD8 242 aa13.92□□□□□ -0.18
CIRBP-245ENST00000621399 HYPMO75409 117 aa13.92□□□□□ -0.18
CIRBP-245ENST00000621399 Q6ZNX1 250 aa13.92□□□□□ -0.18
CIRBP-245ENST00000621399 SMIM3Q9BZL3 60 aa13.92□□□□□ -0.18
CIRBP-245ENST00000621399 ARL6Q9H0F7 186 aa13.92□□□□□ -0.18
CIRBP-245ENST00000621399 DNASE2O00115 360 aaPredicted RBP13.91□□□□□ -0.18
CIRBP-245ENST00000621399 MPDU1O75352 247 aa13.91□□□□□ -0.18
CIRBP-245ENST00000621399 OR5G3P0C626 314 aa13.91□□□□□ -0.18
CIRBP-245ENST00000621399 S100A7P31151 101 aa13.91□□□□□ -0.18
CIRBP-245ENST00000621399 WFDC3Q8IUB2 231 aa13.91□□□□□ -0.18
CIRBP-245ENST00000621399 STPG3Q8N7X2 389 aa13.91□□□□□ -0.18
CIRBP-245ENST00000621399 GLMPQ8WWB7 406 aa13.91□□□□□ -0.18
CIRBP-245ENST00000621399 ATP5SQ99766 215 aa13.91□□□□□ -0.18
CIRBP-245ENST00000621399 GGTLC1Q9BX51 225 aa13.91□□□□□ -0.18
CIRBP-245ENST00000621399 MS4A6AQ9H2W1 248 aa13.91□□□□□ -0.18
CIRBP-245ENST00000621399 AP2S1P53680 142 aaPredicted RBP13.9□□□□□ -0.18
CIRBP-245ENST00000621399 PLP1P60201 277 aa13.9□□□□□ -0.18
CIRBP-245ENST00000621399 C1orf194Q5T5A4 169 aa13.9□□□□□ -0.18
CIRBP-245ENST00000621399 PXDC1Q5TGL8 231 aa13.9□□□□□ -0.18
CIRBP-245ENST00000621399 STXBP6Q8NFX7 210 aa13.9□□□□□ -0.18
CIRBP-245ENST00000621399 HIGD1AQ9Y241 93 aa13.9□□□□□ -0.18
CIRBP-245ENST00000621399 FXYD6-FXYD2A0A087WZ82 144 aa13.89□□□□□ -0.19
CIRBP-245ENST00000621399 MIC13Q5XKP0 118 aa13.89□□□□□ -0.19
CIRBP-245ENST00000621399 SIGLEC15Q6ZMC9 328 aa13.89□□□□□ -0.19
CIRBP-245ENST00000621399 Q6ZRG5 221 aa13.89□□□□□ -0.19
CIRBP-245ENST00000621399 S100A7AQ86SG5 101 aa13.89□□□□□ -0.19
CIRBP-245ENST00000621399 OR8I2Q8N0Y5 310 aa13.89□□□□□ -0.19
CIRBP-245ENST00000621399 INO80EQ8NBZ0 244 aaPredicted RBP13.89□□□□□ -0.19
CIRBP-245ENST00000621399 AQP10Q96PS8 301 aa13.89□□□□□ -0.19
CIRBP-245ENST00000621399 FBXL17Q9UF56 701 aa13.89□□□□□ -0.19
CIRBP-245ENST00000621399 ZNF98A6NK75 572 aa13.88□□□□□ -0.19
CIRBP-245ENST00000621399 OR11H12B2RN74 326 aa13.88□□□□□ -0.19
CIRBP-245ENST00000621399 IFNA5P01569 189 aa13.88□□□□□ -0.19
CIRBP-245ENST00000621399 IGHV4-30-4P0DP06 118 aa13.88□□□□□ -0.19
CIRBP-245ENST00000621399 RPL29P47914 159 aaKnown RBP13.88□□□□□ -0.19
CIRBP-245ENST00000621399 PRR20EP86478 221 aa13.88□□□□□ -0.19
CIRBP-245ENST00000621399 PRR20CP86479 221 aa13.88□□□□□ -0.19
CIRBP-245ENST00000621399 PRR20DP86480 221 aa13.88□□□□□ -0.19
CIRBP-245ENST00000621399 PRR20BP86481 221 aa13.88□□□□□ -0.19
CIRBP-245ENST00000621399 PRR20AP86496 221 aa13.88□□□□□ -0.19
CIRBP-245ENST00000621399 OPCMLQ14982 345 aa13.88□□□□□ -0.19
CIRBP-245ENST00000621399 NPCDR1Q9BY65 106 aa13.88□□□□□ -0.19
CIRBP-245ENST00000621399 SLC25A39Q9BZJ4 359 aaPredicted RBP13.88□□□□□ -0.19
CIRBP-245ENST00000621399 WDR61Q9GZS3 305 aaKnown RBP13.88□□□□□ -0.19
CIRBP-245ENST00000621399 ARV1Q9H2C2 271 aa13.88□□□□□ -0.19
CIRBP-245ENST00000621399 SLC25A22Q9H936 323 aa13.88□□□□□ -0.19
CIRBP-245ENST00000621399 PRKDCP78527 4128 aaKnown RBP13.87□□□□□ -0.19
CIRBP-245ENST00000621399 TRAV2A0A0B4J234 112 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 SMLR1H3BR10 107 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 COX7A2P2O60397 106 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 B2MP61769 119 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 PATE2Q6UY27 113 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 DEFB125Q8N687 156 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 ZNF709Q8N972 641 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 SCGB1C1Q8TD33 95 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 UHRF2Q96PU4 802 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 SHANK2-AS3Q9BTD1 123 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 WFDC10AQ9H1F0 79 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 TUBA4BQ9H853 241 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 SLC39A9Q9NUM3 307 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 UBQLN2Q9UHD9 624 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 PXMP4Q9Y6I8 212 aa13.87□□□□□ -0.19
CIRBP-245ENST00000621399 ELOA3CA0A087WX78 387 aaPredicted RBP13.86□□□□□ -0.19
CIRBP-245ENST00000621399 G3V3Q6 166 aa13.86□□□□□ -0.19
CIRBP-245ENST00000621399 H3BRN7 92 aa13.86□□□□□ -0.19
CIRBP-245ENST00000621399 CMC4P56277 68 aaPredicted RBP13.86□□□□□ -0.19
CIRBP-245ENST00000621399 C10orf113Q5VZT2 155 aa13.86□□□□□ -0.19
CIRBP-245ENST00000621399 LEMD1Q68G75 181 aa13.86□□□□□ -0.19
CIRBP-245ENST00000621399 SCRT1Q9BWW7 348 aa13.86□□□□□ -0.19
CIRBP-245ENST00000621399 WFDC1Q9HC57 220 aa13.86□□□□□ -0.19
CIRBP-245ENST00000621399 DNAJC4Q9NNZ3 241 aa13.86□□□□□ -0.19
CIRBP-245ENST00000621399 C19orf73Q9NVV2 129 aa13.86□□□□□ -0.19
CIRBP-245ENST00000621399 TNFSF18Q9UNG2 199 aa13.86□□□□□ -0.19
CIRBP-245ENST00000621399 C17orf112F2Z3M2 114 aa13.85□□□□□ -0.19
CIRBP-245ENST00000621399 ODF3L2Q3SX64 289 aa13.85□□□□□ -0.19
CIRBP-245ENST00000621399 LINC00305Q7Z4B0 112 aa13.85□□□□□ -0.19
CIRBP-245ENST00000621399 OR1L4Q8NGR5 311 aa13.85□□□□□ -0.19
CIRBP-245ENST00000621399 TMEM37Q8WXS4 190 aa13.85□□□□□ -0.19
CIRBP-245ENST00000621399 SLC25A32Q9H2D1 315 aa13.85□□□□□ -0.19
CIRBP-245ENST00000621399 NRN1Q9NPD7 142 aa13.85□□□□□ -0.19
CIRBP-245ENST00000621399 KCNIP2Q9NS61 270 aa13.85□□□□□ -0.19
CIRBP-245ENST00000621399 hCG_2014768A0A024R1R8 64 aa13.84□□□□□ -0.19
CIRBP-245ENST00000621399 A8MZ25 164 aa13.84□□□□□ -0.19
CIRBP-245ENST00000621399 K7EQG2 157 aa13.84□□□□□ -0.19
CIRBP-245ENST00000621399 FRMD6-AS1P0C7T7 363 aa13.84□□□□□ -0.19
CIRBP-245ENST00000621399 GALR1P47211 349 aa13.84□□□□□ -0.19
CIRBP-245ENST00000621399 DCANP1Q8TF63 244 aa13.84□□□□□ -0.19
CIRBP-245ENST00000621399 GPR82Q96P67 336 aa13.84□□□□□ -0.19
CIRBP-245ENST00000621399 PFDN5Q99471 154 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms