RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 STRAPQ9Y3F4 350 aaKnown RBP12.43□□□□□ -0.42
HMGN3-203ENST00000620514 ELOA3CA0A087WX78 387 aaPredicted RBP12.42□□□□□ -0.42
HMGN3-203ENST00000620514 SOCS3O14543 225 aa12.42□□□□□ -0.42
HMGN3-203ENST00000620514 HLA-DRB4P13762 266 aa12.42□□□□□ -0.42
HMGN3-203ENST00000620514 MIFP14174 115 aa12.42□□□□□ -0.42
HMGN3-203ENST00000620514 NKX2-1P43699 371 aaPredicted RBP12.42□□□□□ -0.42
HMGN3-203ENST00000620514 TBC1D24Q9ULP9 559 aa12.42□□□□□ -0.42
HMGN3-203ENST00000620514 HLA-DRB4X5D2U9 266 aa12.42□□□□□ -0.42
HMGN3-203ENST00000620514 IFNA21P01568 189 aa12.41□□□□□ -0.42
HMGN3-203ENST00000620514 IGKV3-20P01619 116 aa12.41□□□□□ -0.42
HMGN3-203ENST00000620514 AKR1C1Q04828 323 aa12.41□□□□□ -0.42
HMGN3-203ENST00000620514 C4orf46Q504U0 113 aa12.41□□□□□ -0.42
HMGN3-203ENST00000620514 OR8I2Q8N0Y5 310 aa12.41□□□□□ -0.42
HMGN3-203ENST00000620514 C7orf50Q9BRJ6 194 aaKnown RBP12.41□□□□□ -0.42
HMGN3-203ENST00000620514 PSENENQ9NZ42 101 aa12.41□□□□□ -0.42
HMGN3-203ENST00000620514 PMS2P5A8MQ11 134 aa12.4□□□□□ -0.42
HMGN3-203ENST00000620514 CENPXA8MT69 81 aa12.4□□□□□ -0.42
HMGN3-203ENST00000620514 PLA2G10O15496 165 aa12.4□□□□□ -0.42
HMGN3-203ENST00000620514 SSSCA1O60232 199 aa12.4□□□□□ -0.42
HMGN3-203ENST00000620514 CCNKO75909 580 aa12.4□□□□□ -0.42
HMGN3-203ENST00000620514 ID1P41134 155 aa12.4□□□□□ -0.42
HMGN3-203ENST00000620514 FXYD7P58549 80 aa12.4□□□□□ -0.42
HMGN3-203ENST00000620514 SLC25A32Q9H2D1 315 aa12.4□□□□□ -0.42
HMGN3-203ENST00000620514 SAV1Q9H4B6 383 aaPredicted RBP12.4□□□□□ -0.42
HMGN3-203ENST00000620514 SMCO3A2RU48 225 aa12.39□□□□□ -0.43
HMGN3-203ENST00000620514 ZNF98A6NK75 572 aa12.39□□□□□ -0.43
HMGN3-203ENST00000620514 SCGB1D2O95969 90 aa12.39□□□□□ -0.43
HMGN3-203ENST00000620514 CFDP00746 253 aaPredicted RBP12.39□□□□□ -0.43
HMGN3-203ENST00000620514 ORM2P19652 201 aa12.39□□□□□ -0.43
HMGN3-203ENST00000620514 HLA-DMBP28068 263 aa12.39□□□□□ -0.43
HMGN3-203ENST00000620514 PSMB3P49720 205 aa12.39□□□□□ -0.43
HMGN3-203ENST00000620514 PAX9P55771 341 aa12.39□□□□□ -0.43
HMGN3-203ENST00000620514 NUTF2P61970 127 aaKnown RBP12.39□□□□□ -0.43
HMGN3-203ENST00000620514 RPP25LQ8N5L8 163 aaKnown RBP12.39□□□□□ -0.43
HMGN3-203ENST00000620514 BPIFCQ8NFQ6 507 aa12.39□□□□□ -0.43
HMGN3-203ENST00000620514 C17orf77Q96MU5 243 aa12.39□□□□□ -0.43
HMGN3-203ENST00000620514 HRH4Q9H3N8 390 aa12.39□□□□□ -0.43
HMGN3-203ENST00000620514 SLC25A22Q9H936 323 aa12.39□□□□□ -0.43
HMGN3-203ENST00000620514 F6UB75 175 aa12.38□□□□□ -0.43
HMGN3-203ENST00000620514 DEDDO75618 318 aa12.38□□□□□ -0.43
HMGN3-203ENST00000620514 IAH1Q2TAA2 248 aaPredicted RBP12.38□□□□□ -0.43
HMGN3-203ENST00000620514 FOXI2Q6ZQN5 318 aa12.38□□□□□ -0.43
HMGN3-203ENST00000620514 TMEM144Q7Z5S9 345 aa12.38□□□□□ -0.43
HMGN3-203ENST00000620514 ZBTB8BQ8NAP8 495 aaPredicted RBP12.38□□□□□ -0.43
HMGN3-203ENST00000620514 OR1B1Q8NGR6 318 aa12.38□□□□□ -0.43
HMGN3-203ENST00000620514 C2CD4CQ8TF44 421 aa12.38□□□□□ -0.43
HMGN3-203ENST00000620514 SMIM8Q96KF7 97 aa12.38□□□□□ -0.43
HMGN3-203ENST00000620514 C20orf173Q96LM9 149 aa12.38□□□□□ -0.43
HMGN3-203ENST00000620514 C1QTNF4Q9BXJ3 329 aa12.38□□□□□ -0.43
HMGN3-203ENST00000620514 DOK5Q9P104 306 aa12.38□□□□□ -0.43
HMGN3-203ENST00000620514 SLC45A2Q9UMX9 530 aa12.38□□□□□ -0.43
HMGN3-203ENST00000620514 CELA1Q9UNI1 258 aa12.38□□□□□ -0.43
HMGN3-203ENST00000620514 KMT2AQ03164 3969 aa12.37□□□□□ -0.43
HMGN3-203ENST00000620514 ISLRO14498 428 aa12.37□□□□□ -0.43
HMGN3-203ENST00000620514 RRAS2P62070 204 aaPredicted RBP12.37□□□□□ -0.43
HMGN3-203ENST00000620514 LGALS9CQ6DKI2 356 aa12.37□□□□□ -0.43
HMGN3-203ENST00000620514 CYP2G1PQ6ZSU1 146 aa12.37□□□□□ -0.43
HMGN3-203ENST00000620514 Q6ZTC4 211 aa12.37□□□□□ -0.43
HMGN3-203ENST00000620514 OR4B1Q8NGF8 309 aa12.37□□□□□ -0.43
HMGN3-203ENST00000620514 MITD1Q8WV92 249 aa12.37□□□□□ -0.43
HMGN3-203ENST00000620514 RSG1Q9BU20 258 aa12.37□□□□□ -0.43
HMGN3-203ENST00000620514 TMEM147Q9BVK8 224 aa12.37□□□□□ -0.43
HMGN3-203ENST00000620514 C20orf85Q9H1P6 137 aa12.37□□□□□ -0.43
HMGN3-203ENST00000620514 GSKIPQ9P0R6 139 aa12.37□□□□□ -0.43
HMGN3-203ENST00000620514 IGLL5B9A064 214 aa12.36□□□□□ -0.43
HMGN3-203ENST00000620514 LYRM1O43325 122 aa12.36□□□□□ -0.43
HMGN3-203ENST00000620514 METTL15P1P0C7V9 234 aa12.36□□□□□ -0.43
HMGN3-203ENST00000620514 GALR1P47211 349 aa12.36□□□□□ -0.43
HMGN3-203ENST00000620514 TMEM14EPQ6UXP3 125 aa12.36□□□□□ -0.43
HMGN3-203ENST00000620514 ZNF767PQ75MW2 155 aa12.36□□□□□ -0.43
HMGN3-203ENST00000620514 ZNF709Q8N972 641 aa12.36□□□□□ -0.43
HMGN3-203ENST00000620514 C16orf92Q96LL3 132 aa12.36□□□□□ -0.43
HMGN3-203ENST00000620514 SCRT1Q9BWW7 348 aa12.36□□□□□ -0.43
HMGN3-203ENST00000620514 NDUFA13Q9P0J0 144 aa12.36□□□□□ -0.43
HMGN3-203ENST00000620514 RCL1Q9Y2P8 373 aaKnown RBP12.36□□□□□ -0.43
HMGN3-203ENST00000620514 C11orf94C9JXX5 98 aa12.35□□□□□ -0.43
HMGN3-203ENST00000620514 CCSO14618 274 aa12.35□□□□□ -0.43
HMGN3-203ENST00000620514 IL5P05113 134 aa12.35□□□□□ -0.43
HMGN3-203ENST00000620514 FAM78BQ5VT40 261 aa12.35□□□□□ -0.43
HMGN3-203ENST00000620514 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.35□□□□□ -0.43
HMGN3-203ENST00000620514 ZNF705AQ6ZN79 300 aaPredicted RBP12.35□□□□□ -0.43
HMGN3-203ENST00000620514 SLC35B3Q9H1N7 401 aa12.35□□□□□ -0.43
HMGN3-203ENST00000620514 APLNQ9ULZ1 77 aa12.35□□□□□ -0.43
HMGN3-203ENST00000620514 VPS13DQ5THJ4 4388 aa12.34□□□□□ -0.43
HMGN3-203ENST00000620514 IGHV3OR16-12A0A075B7B8 117 aa12.34□□□□□ -0.43
HMGN3-203ENST00000620514 A0A0J9YX75 114 aa12.34□□□□□ -0.43
HMGN3-203ENST00000620514 H3BRN7 92 aa12.34□□□□□ -0.43
HMGN3-203ENST00000620514 MEOX2P50222 304 aa12.34□□□□□ -0.43
HMGN3-203ENST00000620514 DLK1P80370 383 aa12.34□□□□□ -0.43
HMGN3-203ENST00000620514 ARL16Q0P5N6 197 aa12.34□□□□□ -0.43
HMGN3-203ENST00000620514 C12orf74Q32Q52 190 aa12.34□□□□□ -0.43
HMGN3-203ENST00000620514 CNPY1Q3B7I2 92 aa12.34□□□□□ -0.43
HMGN3-203ENST00000620514 IGFL4Q6B9Z1 124 aa12.34□□□□□ -0.43
HMGN3-203ENST00000620514 CLUHP3Q96NS8 147 aa12.34□□□□□ -0.43
HMGN3-203ENST00000620514 SLC25A39Q9BZJ4 359 aaPredicted RBP12.34□□□□□ -0.43
HMGN3-203ENST00000620514 TRAV6A0A075B6T7 132 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 TRAV10A0A0B4J240 114 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 ZNF705FA8MVS1 300 aaPredicted RBP12.33□□□□□ -0.44
HMGN3-203ENST00000620514 TSC22D2O75157 780 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 MBPP02686 304 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms