RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CFPP27918 469 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 PSMB6P28072 239 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 CLDN12P56749 244 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 UBE2D3P61077 147 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 GLDNQ6ZMI3 551 aaPredicted RBP2.71□□□□□ -1.98
LPP-220ENST00000617246 LYNX1G3V0Z9 82 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 SIVA1O15304 175 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 LYNX1P0DP58 116 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 PAX9P55771 341 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 ANXA2RQ3ZCQ2 193 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 PGLYRP4Q96LB8 373 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 TXNL4BQ9NX01 149 aaKnown RBP2.71□□□□□ -1.98
LPP-220ENST00000617246 MAP1LC3B2A6NCE7 125 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 FSTP19883 344 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 HIST1H2BAQ96A08 127 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 FAM103A1Q9BTL3 118 aaKnown RBP2.71□□□□□ -1.98
LPP-220ENST00000617246 MAP1LC3BQ9GZQ8 125 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 RBKSQ9H477 322 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 CGB1A6NKQ9 187 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 IFITM5A6NNB3 132 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 TNFRSF9Q07011 255 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 TRAV24A0A0B4J272 114 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 KRBOX1C9JBD0 128 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 RNF224P0DH78 156 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 PSG7Q13046 419 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 SRSF6Q13247 344 aaKnown RBP2.71□□□□□ -1.98
LPP-220ENST00000617246 V9GYS6 101 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 KIR2DL5BA0A0G2JN68 375 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 KIR2DL5BA0A0G2JPC4 375 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 C1orf134Q5TEV5 83 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 SLC25A48Q6ZT89 311 aaKnown RBP2.71□□□□□ -1.98
LPP-220ENST00000617246 KIR2DL5AQ8N109 375 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 MRGPRFQ96AM1 343 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 RNF185Q96GF1 192 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 IMMP2LQ96T52 175 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 FBLN5Q9UBX5 448 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 SHPKQ9UHJ6 478 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 HSPB8Q9UJY1 196 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 WFDC12Q8WWY7 111 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 P2RY4P51582 365 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 SRSF9Q13242 221 aaKnown RBP eCLIP2.71□□□□□ -1.98
LPP-220ENST00000617246 KIAA0141Q14154 515 aaPredicted RBP2.71□□□□□ -1.98
LPP-220ENST00000617246 FAM74A3Q4VXF1 159 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 ZNF329Q86UD4 541 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 ZNF696Q9H7X3 374 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 RPS10P5Q9NQ39 176 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 IGHV2-70P01814 119 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 COL8A2P25067 703 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 FAM3BP58499 235 aaPredicted RBP2.7□□□□□ -1.98
LPP-220ENST00000617246 GAFA1Q96PS6 74 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 CTXND1A0A1B0GTU2 59 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 A0A1B0GWJ7 208 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 IFITM10A6NMD0 228 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 NXPH4O95158 308 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 C1QCP02747 245 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 C16orf54Q6UWD8 224 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 Q8TCH9 128 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 UBE2WQ96B02 151 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 ID3Q02535 119 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 YIPF5Q969M3 257 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 SEC11CQ9BY50 192 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 ETDCA0A1B0GVM5 59 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 INAFM2P0DMQ5 153 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 CXCL5P42830 114 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 TEX43Q6ZNM6 134 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 CACNA1BQ00975 2339 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 H1FOOQ8IZA3 346 aaPredicted RBP2.7□□□□□ -1.98
LPP-220ENST00000617246 GAGE12BA1L429 117 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 A8MXK9 166 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 M0R2Z0 102 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 ARPC5O15511 151 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 GAGE7O76087 117 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 GAGE12FP0CL80 117 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 GAGE12GP0CL81 117 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 GAGE12IP0CL82 117 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 OR11H7Q8NGC8 314 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 SFT2D1Q8WV19 159 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 GGACTQ9BVM4 153 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 NEGR1Q7Z3B1 354 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 FAM231BA6NCW3 169 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 GLIPR1P48060 266 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 C6orf226Q5I0X4 101 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 CGB2Q6NT52 195 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 TRPT1Q86TN4 253 aaKnown RBP2.7□□□□□ -1.98
LPP-220ENST00000617246 C1orf196B1AJZ1 125 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 LDLRAD3Q86YD5 345 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 SCGB3A1Q96QR1 104 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 OR5C1Q8NGR4 320 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 IGHV4-61A0A0C4DH41 118 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 CTDSPLO15194 276 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 SMIM10L1P0DMW3 83 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 OR2T35Q8NGX2 323 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 ADAT3Q96EY9 351 aaPredicted RBP2.7□□□□□ -1.98
LPP-220ENST00000617246 SMIM10Q96HG1 83 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 PSMG3Q9BT73 122 aaPredicted RBP2.7□□□□□ -1.98
LPP-220ENST00000617246 TMEM191AQ9H0A3 160 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 FGF20Q9NP95 211 aaPredicted RBP2.7□□□□□ -1.98
LPP-220ENST00000617246 KAAG1Q9UBP8 84 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 SHANK1Q9Y566 2161 aa2.7□□□□□ -1.98
LPP-220ENST00000617246 TMEM235A6NFC5 223 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms