RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 LYZP61626 148 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 MORN5Q5VZ52 161 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 CST9LP1Q5W188 147 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 FAM223AQ8IWN6 122 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 STXBP6Q8NFX7 210 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 OR4F5Q8NH21 305 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 ZNF502Q8TBZ5 544 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 Q8WTZ3 238 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 EEF1AKMT3Q96AZ1 226 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 ZNF503Q96F45 646 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 FAM167A-AS1Q96KT0 104 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 UHRF2Q96PU4 802 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 OR4F4Q96R69 305 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 SLC25A2Q9BXI2 301 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 LINC00527Q9UJ94 153 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 ZNF580Q9UK33 172 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 HIGD1AQ9Y241 93 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 ARL2-SNX15V9GYD0 113 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 MYO9AB2RTY4 2548 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 WI2-2373I1.2A0A1W2PRP0 233 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 OR2T8A6NH00 312 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 NUPL2O15504 423 aaKnown RBP6.94□□□□□ -1.3
CCDC47-207ENST00000612558 HOXA3O43365 443 aaPredicted RBP6.94□□□□□ -1.3
CCDC47-207ENST00000612558 PDE6DO43924 150 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 SCO1O75880 301 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 OR2C1O95371 312 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 IGHV3-23P01764 117 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 CLEC3BP05452 202 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 PPIFP30405 207 aaKnown RBP6.94□□□□□ -1.3
CCDC47-207ENST00000612558 ATP5G2Q06055 141 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 KRTAP1-1Q07627 177 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 ATRAIDQ6UW56 229 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 S100A7AQ86SG5 101 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 ZNF491Q8N8L2 437 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 OR5AU1Q8NGC0 362 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 NOL4LQ96MY1 436 aaPredicted RBP6.94□□□□□ -1.3
CCDC47-207ENST00000612558 MS4A10Q96PG2 267 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 ATP6V0BQ99437 205 aa6.94□□□□□ -1.3
CCDC47-207ENST00000612558 NKX6-2Q9C056 277 aaPredicted RBP6.94□□□□□ -1.3
CCDC47-207ENST00000612558 MRPL27Q9P0M9 148 aaKnown RBP6.94□□□□□ -1.3
CCDC47-207ENST00000612558 FAM74A7A6NL05 159 aa6.93□□□□□ -1.3
CCDC47-207ENST00000612558 F6UZH7 168 aa6.93□□□□□ -1.3
CCDC47-207ENST00000612558 TRGV3P03979 118 aa6.93□□□□□ -1.3
CCDC47-207ENST00000612558 IL4P05112 153 aa6.93□□□□□ -1.3
CCDC47-207ENST00000612558 RNASE1P07998 156 aaKnown RBP6.93□□□□□ -1.3
CCDC47-207ENST00000612558 SRP14P37108 136 aaKnown RBP6.93□□□□□ -1.3
CCDC47-207ENST00000612558 FAM74A3Q4VXF1 159 aa6.93□□□□□ -1.3
CCDC47-207ENST00000612558 FAM90A2PQ658T7 463 aa6.93□□□□□ -1.3
CCDC47-207ENST00000612558 CLRN3Q8NCR9 226 aa6.93□□□□□ -1.3
CCDC47-207ENST00000612558 RNF125Q96EQ8 232 aa6.93□□□□□ -1.3
CCDC47-207ENST00000612558 USMG5Q96IX5 58 aa6.93□□□□□ -1.3
CCDC47-207ENST00000612558 PAXXQ9BUH6 204 aa6.93□□□□□ -1.3
CCDC47-207ENST00000612558 PRSS22Q9GZN4 317 aa6.93□□□□□ -1.3
CCDC47-207ENST00000612558 OR51M1Q9H341 326 aa6.93□□□□□ -1.3
CCDC47-207ENST00000612558 MXRA5Q9NR99 2828 aa6.93□□□□□ -1.3
CCDC47-207ENST00000612558 A0A1W2PRE2 83 aa6.92□□□□□ -1.3
CCDC47-207ENST00000612558 H3BQ15 152 aa6.92□□□□□ -1.3
CCDC47-207ENST00000612558 OR10J4P0C629 311 aa6.92□□□□□ -1.3
CCDC47-207ENST00000612558 GPR183P32249 361 aa6.92□□□□□ -1.3
CCDC47-207ENST00000612558 ATP5G3P48201 142 aa6.92□□□□□ -1.3
CCDC47-207ENST00000612558 UBE2L3P68036 154 aaKnown RBP6.92□□□□□ -1.3
CCDC47-207ENST00000612558 IL17RELQ6ZVW7 336 aa6.92□□□□□ -1.3
CCDC47-207ENST00000612558 TMEM86BQ8N661 226 aa6.92□□□□□ -1.3
CCDC47-207ENST00000612558 SIGLECL1Q8N7X8 197 aa6.92□□□□□ -1.3
CCDC47-207ENST00000612558 CCDC140Q96MF4 163 aa6.92□□□□□ -1.3
CCDC47-207ENST00000612558 NIPSNAP3BQ9BS92 247 aa6.92□□□□□ -1.3
CCDC47-207ENST00000612558 CHRDL1Q9BU40 450 aa6.92□□□□□ -1.3
CCDC47-207ENST00000612558 SLC25A39Q9BZJ4 359 aaPredicted RBP6.92□□□□□ -1.3
CCDC47-207ENST00000612558 NPFFR1Q9GZQ6 430 aa6.92□□□□□ -1.3
CCDC47-207ENST00000612558 YAE1D1Q9NRH1 226 aa6.92□□□□□ -1.3
CCDC47-207ENST00000612558 YTHDF2Q9Y5A9 579 aaKnown RBP6.92□□□□□ -1.3
CCDC47-207ENST00000612558 PUS1Q9Y606 427 aaKnown RBP eCLIP6.92□□□□□ -1.3
CCDC47-207ENST00000612558 ZNF727A8MUV8 499 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 M0R036 132 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 PYYP10082 97 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 HNF1AP20823 631 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 TPPP2P59282 170 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 CFHR3Q02985 330 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 BTN1A1Q13410 526 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 KIAA0141Q14154 515 aaPredicted RBP6.91□□□□□ -1.3
CCDC47-207ENST00000612558 CLEC19AQ6UXS0 136 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 ZNF600Q6ZNG1 722 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 WFDC3Q8IUB2 231 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 TVP23CQ96ET8 276 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 SHANK2-AS3Q9BTD1 123 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 TMEM14CQ9P0S9 112 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 A0A0G2JLM5 398 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 H3BRN7 92 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 TGOLN2O43493 480 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 PF4V1P10720 104 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 NPPCP23582 126 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 S100A7P31151 101 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 PNRC1Q12796 327 aaPredicted RBP6.91□□□□□ -1.3
CCDC47-207ENST00000612558 USF2Q15853 346 aaPredicted RBP6.91□□□□□ -1.3
CCDC47-207ENST00000612558 AWAT1Q58HT5 328 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 LEMD1Q68G75 181 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 RPUSD4Q96CM3 377 aaKnown RBP6.91□□□□□ -1.3
CCDC47-207ENST00000612558 FXYD5Q96DB9 178 aa6.91□□□□□ -1.3
CCDC47-207ENST00000612558 SMIM7Q9BQ49 75 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms