RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 CCL21O00585 134 aa13.71□□□□□ -0.21
NEK3-206ENST00000611833 CAMPP49913 170 aa13.71□□□□□ -0.21
NEK3-206ENST00000611833 RASL11BQ9BPW5 248 aa13.71□□□□□ -0.21
NEK3-206ENST00000611833 C20orf144Q9BQM9 153 aa13.71□□□□□ -0.21
NEK3-206ENST00000611833 RNF114Q9Y508 228 aa13.71□□□□□ -0.21
NEK3-206ENST00000611833 LY6HO94772 140 aa13.7□□□□□ -0.22
NEK3-206ENST00000611833 TOMM40O96008 361 aa13.7□□□□□ -0.22
NEK3-206ENST00000611833 LIPFP07098 398 aa13.7□□□□□ -0.22
NEK3-206ENST00000611833 IGLC1P0CG04 106 aa13.7□□□□□ -0.22
NEK3-206ENST00000611833 GDF5OSQ5U4N7 250 aa13.7□□□□□ -0.22
NEK3-206ENST00000611833 RNF5Q99942 180 aa13.7□□□□□ -0.22
NEK3-206ENST00000611833 WNT10AQ9GZT5 417 aa13.7□□□□□ -0.22
NEK3-206ENST00000611833 TCRAP04437 139 aa13.7□□□□□ -0.22
NEK3-206ENST00000611833 FAM19A2Q8N3H0 131 aa13.7□□□□□ -0.22
NEK3-206ENST00000611833 C18orf32Q8TCD1 76 aa13.7□□□□□ -0.22
NEK3-206ENST00000611833 LY6LH3BQJ8 138 aa13.69□□□□□ -0.22
NEK3-206ENST00000611833 I3L2K1 104 aa13.69□□□□□ -0.22
NEK3-206ENST00000611833 TIMM23O14925 209 aa13.69□□□□□ -0.22
NEK3-206ENST00000611833 NTF3P20783 257 aa13.69□□□□□ -0.22
NEK3-206ENST00000611833 MMDQ15546 238 aa13.69□□□□□ -0.22
NEK3-206ENST00000611833 LDLRAD2Q5SZI1 272 aa13.69□□□□□ -0.22
NEK3-206ENST00000611833 MIEN1Q9BRT3 115 aa13.69□□□□□ -0.22
NEK3-206ENST00000611833 SSBP4Q9BWG4 385 aaPredicted RBP13.69□□□□□ -0.22
NEK3-206ENST00000611833 SLC25A39Q9BZJ4 359 aaPredicted RBP13.69□□□□□ -0.22
NEK3-206ENST00000611833 RPP21Q9H633 154 aaKnown RBP13.69□□□□□ -0.22
NEK3-206ENST00000611833 MSRB2Q9Y3D2 182 aa13.69□□□□□ -0.22
NEK3-206ENST00000611833 LTAP01374 205 aa13.69□□□□□ -0.22
NEK3-206ENST00000611833 DAZAP1Q96EP5 407 aaKnown RBP13.69□□□□□ -0.22
NEK3-206ENST00000611833 MLST8Q9BVC4 326 aa13.69□□□□□ -0.22
NEK3-206ENST00000611833 ANKHD1Q8IWZ3 2542 aaKnown RBP13.69□□□□□ -0.22
NEK3-206ENST00000611833 P01737 135 aa13.68□□□□□ -0.22
NEK3-206ENST00000611833 GPR6P46095 362 aaPredicted RBP13.68□□□□□ -0.22
NEK3-206ENST00000611833 LINC00322Q6ZN03 302 aaPredicted RBP13.68□□□□□ -0.22
NEK3-206ENST00000611833 TCF24Q7RTU0 167 aa13.68□□□□□ -0.22
NEK3-206ENST00000611833 ATP5L2Q7Z4Y8 100 aa13.68□□□□□ -0.22
NEK3-206ENST00000611833 MRPL27Q9P0M9 148 aaKnown RBP13.68□□□□□ -0.22
NEK3-206ENST00000611833 RAB4AP20338 218 aa13.68□□□□□ -0.22
NEK3-206ENST00000611833 HTR1DP28221 377 aa13.68□□□□□ -0.22
NEK3-206ENST00000611833 NUTF2P61970 127 aaKnown RBP13.68□□□□□ -0.22
NEK3-206ENST00000611833 ARF6P62330 175 aa13.68□□□□□ -0.22
NEK3-206ENST00000611833 BORCS7Q96B45 105 aa13.68□□□□□ -0.22
NEK3-206ENST00000611833 HILPDAQ9Y5L2 63 aa13.68□□□□□ -0.22
NEK3-206ENST00000611833 TPRP12270 2363 aaKnown RBP13.67□□□□□ -0.22
NEK3-206ENST00000611833 A8MWL6 223 aa13.67□□□□□ -0.22
NEK3-206ENST00000611833 LY6G5BQ8NDX9 201 aa13.67□□□□□ -0.22
NEK3-206ENST00000611833 OR2D3Q8NGH3 330 aa13.67□□□□□ -0.22
NEK3-206ENST00000611833 SRSF8Q9BRL6 282 aaKnown RBP13.67□□□□□ -0.22
NEK3-206ENST00000611833 RAB1BQ9H0U4 201 aa13.67□□□□□ -0.22
NEK3-206ENST00000611833 OTORQ9NRC9 128 aa13.67□□□□□ -0.22
NEK3-206ENST00000611833 ABCA4P78363 2273 aa13.67□□□□□ -0.22
NEK3-206ENST00000611833 VWC2LB2RUY7 222 aa13.67□□□□□ -0.22
NEK3-206ENST00000611833 ADORA2A-AS1P86434 159 aa13.67□□□□□ -0.22
NEK3-206ENST00000611833 NIT1Q86X76 327 aa13.67□□□□□ -0.22
NEK3-206ENST00000611833 Q8N976 141 aa13.67□□□□□ -0.22
NEK3-206ENST00000611833 OR4B1Q8NGF8 309 aa13.67□□□□□ -0.22
NEK3-206ENST00000611833 TMEM14CQ9P0S9 112 aa13.67□□□□□ -0.22
NEK3-206ENST00000611833 RAXQ9Y2V3 346 aa13.67□□□□□ -0.22
NEK3-206ENST00000611833 HSBP1O75506 76 aa13.66□□□□□ -0.22
NEK3-206ENST00000611833 TOX4O94842 621 aa13.66□□□□□ -0.22
NEK3-206ENST00000611833 PRSS22Q9GZN4 317 aa13.66□□□□□ -0.22
NEK3-206ENST00000611833 DPM3Q9P2X0 92 aa13.66□□□□□ -0.22
NEK3-206ENST00000611833 C3orf79P0CE67 100 aa13.65□□□□□ -0.22
NEK3-206ENST00000611833 HBBP68871 147 aa13.65□□□□□ -0.22
NEK3-206ENST00000611833 EXOC3-AS1Q8N2X6 119 aa13.65□□□□□ -0.22
NEK3-206ENST00000611833 TIMD4Q96H15 378 aa13.65□□□□□ -0.22
NEK3-206ENST00000611833 RBM14Q96PK6 669 aaKnown RBP13.65□□□□□ -0.22
NEK3-206ENST00000611833 ALKBH7Q9BT30 221 aaPredicted RBP13.65□□□□□ -0.22
NEK3-206ENST00000611833 ZNF492Q9P255 531 aa13.65□□□□□ -0.22
NEK3-206ENST00000611833 SPTA1P02549 2419 aa13.65□□□□□ -0.22
NEK3-206ENST00000611833 TRAV8-1A0A0A6YYK1 113 aa13.65□□□□□ -0.22
NEK3-206ENST00000611833 A0A1B0GXF2 115 aa13.65□□□□□ -0.22
NEK3-206ENST00000611833 NBR2O15453 112 aa13.65□□□□□ -0.22
NEK3-206ENST00000611833 OR2J3O76001 311 aa13.65□□□□□ -0.22
NEK3-206ENST00000611833 IGKV1-17P01599 117 aa13.65□□□□□ -0.22
NEK3-206ENST00000611833 KLF5Q13887 457 aaPredicted RBP13.65□□□□□ -0.22
NEK3-206ENST00000611833 CT83Q5H943 113 aa13.65□□□□□ -0.22
NEK3-206ENST00000611833 PGLYRP4Q96LB8 373 aa13.65□□□□□ -0.22
NEK3-206ENST00000611833 C19orf71A6NCJ1 209 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 K7EIM0 57 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 TCAPO15273 167 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 CD24P25063 80 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 GOLT1AQ6ZVE7 132 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 ARHGAP32A7KAX9 2087 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 A6NNC1 897 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 M0QZK8 103 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 CEACAM3P40198 252 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 PRR31Q5SQ13 230 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 RNASEKQ6P5S7 137 aaKnown RBP13.64□□□□□ -0.23
NEK3-206ENST00000611833 PRNTQ86SH4 94 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 Q86TA4 180 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 GTSF1Q8WW33 167 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 IGFBPL1Q8WX77 278 aa13.64□□□□□ -0.23
NEK3-206ENST00000611833 KLRB1Q12918 225 aa13.63□□□□□ -0.23
NEK3-206ENST00000611833 HES1Q14469 280 aa13.63□□□□□ -0.23
NEK3-206ENST00000611833 BPIFA4PQ86YQ2 179 aa13.63□□□□□ -0.23
NEK3-206ENST00000611833 OR11H6Q8NGC7 330 aa13.63□□□□□ -0.23
NEK3-206ENST00000611833 ABCA1O95477 2261 aa13.63□□□□□ -0.23
NEK3-206ENST00000611833 M0R2Z0 102 aa13.63□□□□□ -0.23
NEK3-206ENST00000611833 COL8A1P27658 744 aa13.63□□□□□ -0.23
NEK3-206ENST00000611833 SPATA45Q537H7 98 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms