RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ARL3P36405 182 aa13.93□□□□□ -0.18
VRK3-225ENST00000601912 STXBP6Q8NFX7 210 aa13.93□□□□□ -0.18
VRK3-225ENST00000601912 ANKRD34BA5PLL1 514 aa13.92□□□□□ -0.18
VRK3-225ENST00000601912 BMPR1BO00238 502 aa13.92□□□□□ -0.18
VRK3-225ENST00000601912 CRLF1O75462 422 aa13.92□□□□□ -0.18
VRK3-225ENST00000601912 BCL2P10415 239 aa13.92□□□□□ -0.18
VRK3-225ENST00000601912 ZNF506Q5JVG8 444 aa13.92□□□□□ -0.18
VRK3-225ENST00000601912 KLHDC1Q8N7A1 406 aa13.92□□□□□ -0.18
VRK3-225ENST00000601912 OR5AU1Q8NGC0 362 aa13.92□□□□□ -0.18
VRK3-225ENST00000601912 RARRES2Q99969 163 aa13.92□□□□□ -0.18
VRK3-225ENST00000601912 SCRT1Q9BWW7 348 aa13.92□□□□□ -0.18
VRK3-225ENST00000601912 SLC25A39Q9BZJ4 359 aaPredicted RBP13.92□□□□□ -0.18
VRK3-225ENST00000601912 TMEM167BQ9NRX6 74 aa13.92□□□□□ -0.18
VRK3-225ENST00000601912 TRAV5A0A0B4J249 113 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 PPP5D1E7EU14 171 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 MORN5Q5VZ52 161 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 RNF152Q8N8N0 203 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 SLC25A2Q9BXI2 301 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 VAX2Q9UIW0 290 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 IGHV3-35A0A0C4DH35 117 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 LOC102723971A0A1B0GUV8 181 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 KRBOX1C9JBD0 128 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 TCF21O43680 179 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 RPLP1P05386 114 aaKnown RBP13.91□□□□□ -0.18
VRK3-225ENST00000601912 USF2Q15853 346 aaPredicted RBP13.91□□□□□ -0.18
VRK3-225ENST00000601912 TOMM20LQ6UXN7 152 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 FAM167A-AS1Q96KT0 104 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 C16orf95Q9H693 158 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 RNF24Q9Y225 148 aa13.91□□□□□ -0.18
VRK3-225ENST00000601912 KIAA0141Q14154 515 aaPredicted RBP13.9□□□□□ -0.18
VRK3-225ENST00000601912 ICAM4Q14773 271 aa13.9□□□□□ -0.18
VRK3-225ENST00000601912 RXFP4Q8TDU9 374 aa13.9□□□□□ -0.18
VRK3-225ENST00000601912 SHANK2-AS3Q9BTD1 123 aa13.9□□□□□ -0.18
VRK3-225ENST00000601912 PAXXQ9BUH6 204 aa13.9□□□□□ -0.18
VRK3-225ENST00000601912 OR51M1Q9H341 326 aa13.9□□□□□ -0.18
VRK3-225ENST00000601912 PEF1Q9UBV8 284 aaKnown RBP13.9□□□□□ -0.18
VRK3-225ENST00000601912 RABAC1Q9UI14 185 aa13.9□□□□□ -0.18
VRK3-225ENST00000601912 TMEM218A2RU14 115 aa13.89□□□□□ -0.19
VRK3-225ENST00000601912 HSPB1P04792 205 aaKnown RBP13.89□□□□□ -0.19
VRK3-225ENST00000601912 MYOZ3Q8TDC0 251 aa13.89□□□□□ -0.19
VRK3-225ENST00000601912 UBE2E2Q96LR5 201 aa13.89□□□□□ -0.19
VRK3-225ENST00000601912 H3BRN7 92 aa13.88□□□□□ -0.19
VRK3-225ENST00000601912 PAGE4O60829 102 aa13.88□□□□□ -0.19
VRK3-225ENST00000601912 GGCTO75223 188 aaKnown RBP13.88□□□□□ -0.19
VRK3-225ENST00000601912 TRBV12-3P01733 135 aa13.88□□□□□ -0.19
VRK3-225ENST00000601912 UBE2L3P68036 154 aaKnown RBP13.88□□□□□ -0.19
VRK3-225ENST00000601912 ZNF503Q96F45 646 aa13.88□□□□□ -0.19
VRK3-225ENST00000601912 ZFAND3Q9H8U3 227 aa13.88□□□□□ -0.19
VRK3-225ENST00000601912 NDUFA4O00483 81 aa13.88□□□□□ -0.19
VRK3-225ENST00000601912 OR10J4P0C629 311 aa13.88□□□□□ -0.19
VRK3-225ENST00000601912 UBE2G2P60604 165 aa13.88□□□□□ -0.19
VRK3-225ENST00000601912 LEMD1Q68G75 181 aa13.88□□□□□ -0.19
VRK3-225ENST00000601912 OR5B12Q96R08 314 aa13.88□□□□□ -0.19
VRK3-225ENST00000601912 SLC35B3Q9H1N7 401 aa13.88□□□□□ -0.19
VRK3-225ENST00000601912 C9JQL5 133 aa13.87□□□□□ -0.19
VRK3-225ENST00000601912 NDUFA7O95182 113 aa13.87□□□□□ -0.19
VRK3-225ENST00000601912 SFTA3P0C7M3 94 aa13.87□□□□□ -0.19
VRK3-225ENST00000601912 ZP3P21754 424 aa13.87□□□□□ -0.19
VRK3-225ENST00000601912 MEF2BQ02080 365 aaPredicted RBP13.87□□□□□ -0.19
VRK3-225ENST00000601912 CST9LP1Q5W188 147 aa13.87□□□□□ -0.19
VRK3-225ENST00000601912 TXNDC17Q9BRA2 123 aa13.87□□□□□ -0.19
VRK3-225ENST00000601912 ZNF98A6NK75 572 aa13.86□□□□□ -0.19
VRK3-225ENST00000601912 LGALS1P09382 135 aaKnown RBP13.86□□□□□ -0.19
VRK3-225ENST00000601912 PYYP10082 97 aa13.86□□□□□ -0.19
VRK3-225ENST00000601912 BPIFA4PQ86YQ2 179 aa13.86□□□□□ -0.19
VRK3-225ENST00000601912 LINC01006Q8NI28 216 aa13.86□□□□□ -0.19
VRK3-225ENST00000601912 SUN5Q8TC36 379 aa13.86□□□□□ -0.19
VRK3-225ENST00000601912 ZNF414Q96IQ9 312 aa13.86□□□□□ -0.19
VRK3-225ENST00000601912 LINC00052Q96N35 136 aa13.86□□□□□ -0.19
VRK3-225ENST00000601912 METTL26Q96S19 204 aa13.86□□□□□ -0.19
VRK3-225ENST00000601912 C20orf24Q9BUV8 137 aa13.86□□□□□ -0.19
VRK3-225ENST00000601912 TMEM14CQ9P0S9 112 aa13.86□□□□□ -0.19
VRK3-225ENST00000601912 ARL2-SNX15V9GYD0 113 aa13.86□□□□□ -0.19
VRK3-225ENST00000601912 NSD1Q96L73 2696 aaPredicted RBP13.86□□□□□ -0.19
VRK3-225ENST00000601912 IGHV3OR16-8A0A075B7F1 116 aa13.85□□□□□ -0.19
VRK3-225ENST00000601912 OR4F5Q8NH21 305 aa13.85□□□□□ -0.19
VRK3-225ENST00000601912 F8P00451 2351 aa13.85□□□□□ -0.19
VRK3-225ENST00000601912 SETXQ7Z333 2677 aaKnown RBP13.85□□□□□ -0.19
VRK3-225ENST00000601912 C11orf94C9JXX5 98 aa13.85□□□□□ -0.19
VRK3-225ENST00000601912 F8W036 122 aa13.85□□□□□ -0.19
VRK3-225ENST00000601912 SRP19P09132 144 aaKnown RBP13.85□□□□□ -0.19
VRK3-225ENST00000601912 NPPCP23582 126 aa13.85□□□□□ -0.19
VRK3-225ENST00000601912 FXYD5Q96DB9 178 aa13.85□□□□□ -0.19
VRK3-225ENST00000601912 OR4F4Q96R69 305 aa13.85□□□□□ -0.19
VRK3-225ENST00000601912 FN1P02751 2386 aaKnown RBP13.84□□□□□ -0.19
VRK3-225ENST00000601912 FAM74A7A6NL05 159 aa13.84□□□□□ -0.19
VRK3-225ENST00000601912 NDUFS6O75380 124 aaKnown RBP13.84□□□□□ -0.19
VRK3-225ENST00000601912 GP9P14770 177 aa13.84□□□□□ -0.19
VRK3-225ENST00000601912 CDX1P47902 265 aaPredicted RBP13.84□□□□□ -0.19
VRK3-225ENST00000601912 FAM106AQ4KMX7 169 aa13.84□□□□□ -0.19
VRK3-225ENST00000601912 OR4F17Q8NGA8 305 aa13.84□□□□□ -0.19
VRK3-225ENST00000601912 SEC11CQ9BY50 192 aa13.84□□□□□ -0.19
VRK3-225ENST00000601912 A0A1W2PRE2 83 aa13.83□□□□□ -0.2
VRK3-225ENST00000601912 CYSRT1A8MQ03 144 aa13.83□□□□□ -0.2
VRK3-225ENST00000601912 NBEAP1P0C6P0 100 aa13.83□□□□□ -0.2
VRK3-225ENST00000601912 HIST1H1EP10412 219 aaKnown RBP13.83□□□□□ -0.2
VRK3-225ENST00000601912 CD81P60033 236 aa13.83□□□□□ -0.2
VRK3-225ENST00000601912 RPEL1Q2QD12 228 aa13.83□□□□□ -0.2
VRK3-225ENST00000601912 KHDC1LQ5JSQ8 128 aa13.83□□□□□ -0.2
VRK3-225ENST00000601912 NKX6-2Q9C056 277 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms