RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ZNF124Q15973 351 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 AARDQ4LEZ3 155 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 TOMM20LQ6UXN7 152 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 APRG1Q8IVJ8 170 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 GBGT1Q8N5D6 347 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 SAT2Q96F10 170 aaPredicted RBP10.21□□□□□ -0.77
SCAF1-203ENST00000598359 OVOL2Q9BRP0 275 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 GINS3Q9BRX5 216 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 FNDC4Q9H6D8 234 aaPredicted RBP10.21□□□□□ -0.77
SCAF1-203ENST00000598359 ENY2Q9NPA8 101 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 CACNG5Q9UF02 275 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 FAM24AA6NFZ4 105 aa10.2□□□□□ -0.78
SCAF1-203ENST00000598359 OR4C46A6NHA9 309 aa10.2□□□□□ -0.78
SCAF1-203ENST00000598359 INS-IGF2F8WCM5 200 aa10.2□□□□□ -0.78
SCAF1-203ENST00000598359 WRBO00258 174 aa10.2□□□□□ -0.78
SCAF1-203ENST00000598359 RPL35AP18077 110 aaKnown RBP10.2□□□□□ -0.78
SCAF1-203ENST00000598359 PVRIGQ6DKI7 326 aa10.2□□□□□ -0.78
SCAF1-203ENST00000598359 LILRB2Q8N423 598 aa10.2□□□□□ -0.78
SCAF1-203ENST00000598359 TMED6Q8WW62 240 aa10.2□□□□□ -0.78
SCAF1-203ENST00000598359 SMIM8Q96KF7 97 aa10.2□□□□□ -0.78
SCAF1-203ENST00000598359 WFDC1Q9HC57 220 aa10.2□□□□□ -0.78
SCAF1-203ENST00000598359 HSPB7Q9UBY9 170 aa10.2□□□□□ -0.78
SCAF1-203ENST00000598359 PUS1Q9Y606 427 aaKnown RBP eCLIP10.2□□□□□ -0.78
SCAF1-203ENST00000598359 SYNGR2O43760 224 aa10.19□□□□□ -0.78
SCAF1-203ENST00000598359 SPP1P10451 314 aa10.19□□□□□ -0.78
SCAF1-203ENST00000598359 OPRK1P41145 380 aa10.19□□□□□ -0.78
SCAF1-203ENST00000598359 NPBWR1P48145 328 aa10.19□□□□□ -0.78
SCAF1-203ENST00000598359 SUB1P53999 127 aaKnown RBP eCLIP10.19□□□□□ -0.788e-6■■■□□ 15.4
SCAF1-203ENST00000598359 SPCS3P61009 180 aa10.19□□□□□ -0.78
SCAF1-203ENST00000598359 NHLH2Q02577 135 aa10.19□□□□□ -0.78
SCAF1-203ENST00000598359 ZNF266Q14584 549 aa10.19□□□□□ -0.78
SCAF1-203ENST00000598359 WFDC3Q8IUB2 231 aa10.19□□□□□ -0.78
SCAF1-203ENST00000598359 MAGT1Q9H0U3 335 aa10.19□□□□□ -0.78
SCAF1-203ENST00000598359 ZFAND3Q9H8U3 227 aa10.19□□□□□ -0.78
SCAF1-203ENST00000598359 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.19□□□□□ -0.78
SCAF1-203ENST00000598359 PCLOQ9Y6V0 5065 aa10.19□□□□□ -0.78
SCAF1-203ENST00000598359 RAB19A4D1S5 217 aa10.18□□□□□ -0.78
SCAF1-203ENST00000598359 CAV2P51636 162 aa10.18□□□□□ -0.78
SCAF1-203ENST00000598359 DEFB135Q30KP9 77 aa10.18□□□□□ -0.78
SCAF1-203ENST00000598359 BSXQ3C1V8 233 aa10.18□□□□□ -0.78
SCAF1-203ENST00000598359 UQCC3Q6UW78 93 aa10.18□□□□□ -0.78
SCAF1-203ENST00000598359 TCF24Q7RTU0 167 aa10.18□□□□□ -0.78
SCAF1-203ENST00000598359 SMIM3Q9BZL3 60 aa10.18□□□□□ -0.78
SCAF1-203ENST00000598359 HEYLQ9NQ87 328 aaPredicted RBP10.18□□□□□ -0.78
SCAF1-203ENST00000598359 CEBPZOSA8MTT3 80 aa10.17□□□□□ -0.78
SCAF1-203ENST00000598359 KRBOX1C9JBD0 128 aa10.17□□□□□ -0.78
SCAF1-203ENST00000598359 MED6O75586 246 aa10.17□□□□□ -0.78
SCAF1-203ENST00000598359 SULT1A1P50225 295 aa10.17□□□□□ -0.78
SCAF1-203ENST00000598359 BLOC1S1P78537 153 aa10.17□□□□□ -0.78
SCAF1-203ENST00000598359 TNFRSF9Q07011 255 aa10.17□□□□□ -0.78
SCAF1-203ENST00000598359 TIGITQ495A1 244 aa10.17□□□□□ -0.78
SCAF1-203ENST00000598359 FAM90A2PQ658T7 463 aa10.17□□□□□ -0.78
SCAF1-203ENST00000598359 ZNF600Q6ZNG1 722 aa10.17□□□□□ -0.78
SCAF1-203ENST00000598359 OR1S2Q8NGQ3 325 aa10.17□□□□□ -0.78
SCAF1-203ENST00000598359 LYPD6BQ8NI32 183 aa10.17□□□□□ -0.78
SCAF1-203ENST00000598359 TMEM170AQ8WVE7 144 aa10.17□□□□□ -0.78
SCAF1-203ENST00000598359 PLA2G2EQ9NZK7 142 aa10.17□□□□□ -0.78
SCAF1-203ENST00000598359 CORTO00230 105 aa10.16□□□□□ -0.78
SCAF1-203ENST00000598359 CLN5O75503 358 aa10.16□□□□□ -0.78
SCAF1-203ENST00000598359 DFFBO76075 338 aa10.16□□□□□ -0.78
SCAF1-203ENST00000598359 RAB5CP51148 216 aa10.16□□□□□ -0.78
SCAF1-203ENST00000598359 APOC4P55056 127 aa10.16□□□□□ -0.78
SCAF1-203ENST00000598359 STX12Q86Y82 276 aa10.16□□□□□ -0.78
SCAF1-203ENST00000598359 OR52E5Q8NH55 327 aa10.16□□□□□ -0.78
SCAF1-203ENST00000598359 ATP5SQ99766 215 aa10.16□□□□□ -0.78
SCAF1-203ENST00000598359 PARD6GQ9BYG4 376 aaPredicted RBP10.16□□□□□ -0.78
SCAF1-203ENST00000598359 VSIRQ9H7M9 311 aa10.16□□□□□ -0.78
SCAF1-203ENST00000598359 MAP6D1Q9H9H5 199 aa10.16□□□□□ -0.78
SCAF1-203ENST00000598359 CACFD1Q9UGQ2 172 aa10.16□□□□□ -0.78
SCAF1-203ENST00000598359 PLECQ15149 4684 aaKnown RBP10.15□□□□□ -0.78
SCAF1-203ENST00000598359 A0A0J9YWU9 116 aa10.15□□□□□ -0.78
SCAF1-203ENST00000598359 SPRY2O43597 315 aa10.15□□□□□ -0.78
SCAF1-203ENST00000598359 IGKV1-17P01599 117 aa10.15□□□□□ -0.78
SCAF1-203ENST00000598359 RPL11P62913 178 aaKnown RBP10.15□□□□□ -0.78
SCAF1-203ENST00000598359 TMEM14EPQ6UXP3 125 aa10.15□□□□□ -0.78
SCAF1-203ENST00000598359 FAM24BQ8N5W8 94 aa10.15□□□□□ -0.78
SCAF1-203ENST00000598359 OR5C1Q8NGR4 320 aa10.15□□□□□ -0.78
SCAF1-203ENST00000598359 OR4X1Q8NH49 305 aa10.15□□□□□ -0.78
SCAF1-203ENST00000598359 MS4A6AQ9H2W1 248 aa10.15□□□□□ -0.78
SCAF1-203ENST00000598359 RBKSQ9H477 322 aa10.15□□□□□ -0.78
SCAF1-203ENST00000598359 PSENENQ9NZ42 101 aa10.15□□□□□ -0.78
SCAF1-203ENST00000598359 STRAPQ9Y3F4 350 aaKnown RBP10.15□□□□□ -0.78
SCAF1-203ENST00000598359 ZNF705EA8MWA4 302 aaPredicted RBP10.14□□□□□ -0.79
SCAF1-203ENST00000598359 RND2P52198 227 aa10.14□□□□□ -0.79
SCAF1-203ENST00000598359 PMS2P11Q13670 270 aa10.14□□□□□ -0.79
SCAF1-203ENST00000598359 C2orf83Q53S99 150 aa10.14□□□□□ -0.79
SCAF1-203ENST00000598359 PXDC1Q5TGL8 231 aa10.14□□□□□ -0.79
SCAF1-203ENST00000598359 Q6ZWC4 215 aa10.14□□□□□ -0.79
SCAF1-203ENST00000598359 CCDC28AQ8IWP9 274 aa10.14□□□□□ -0.79
SCAF1-203ENST00000598359 STPG3Q8N7X2 389 aa10.14□□□□□ -0.79
SCAF1-203ENST00000598359 SLC24A4Q8NFF2 622 aa10.14□□□□□ -0.79
SCAF1-203ENST00000598359 GNPNAT1Q96EK6 184 aaPredicted RBP10.14□□□□□ -0.79
SCAF1-203ENST00000598359 CIB3Q96Q77 187 aaPredicted RBP10.14□□□□□ -0.79
SCAF1-203ENST00000598359 KIR2DL5BA0A0G2JN68 375 aa10.13□□□□□ -0.79
SCAF1-203ENST00000598359 KIR2DL5BA0A0G2JPC4 375 aa10.13□□□□□ -0.79
SCAF1-203ENST00000598359 UMAD1C9J7I0 102 aa10.13□□□□□ -0.79
SCAF1-203ENST00000598359 TEX46H3BTG2 121 aa10.13□□□□□ -0.79
SCAF1-203ENST00000598359 DNASE2O00115 360 aaPredicted RBP10.13□□□□□ -0.79
SCAF1-203ENST00000598359 IGLC1P0CG04 106 aa10.13□□□□□ -0.79
SCAF1-203ENST00000598359 IAPPP10997 89 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms